Contig 007208:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013F21Sequence581007208 (4)ref|XP_009618900.1|9e-61PREDICTED: uncharacterized protein At3g17950-like [Nicotiana tomentosiformis]677007208 (4)ref|XP_004250956.1|2e-54PREDICTED: uncharacterized protein At3g17950-like [Solanum lycopersicum]
JMSF042H06Sequence774007208 (4)ref|XP_009618900.1|2e-47PREDICTED: uncharacterized protein At3g17950-like [Nicotiana tomentosiformis]808007208 (4)ref|XP_009618900.1|5e-52PREDICTED: uncharacterized protein At3g17950-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF042H06-                                  GATGGAATAAACTTAGGATATGACACCTCTTCTTTGG
                      ____________________________________________________________
consensus                                    GATGGAATAAACTTAGGATATGACACCTCTTCTTTGG
 
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JMSF042H06-           TTAATCCTATCCTAGGATCCTATGCTAGGTAACCTCACTGATTGTTTGTCATTAGGCATT
                      ____________________________________________________________
consensus             TTAATCCTATCCTAGGATCCTATGCTAGGTAACCTCACTGATTGTTTGTCATTAGGCATT
 
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JMSF042H06-           GAGGTTGTACTAACTGATTGAAAATCATTTCAAGACAGAAGGGCAAAAGTAGTAGGACAG
rJMSF042H06+                                         AAGACAGAAGGGCAAAAGTAGTAGGACAG
                      ____________________________________________________________
consensus             GAGGTTGTACTAACTGATTGAAAATCATTTCAAGACAGAAGGGCAAAAGTAGTAGGACAG
 
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JMFF013F21-                            CAGGAAGGAGGGTGGCCTCTGGGACTGCAGCCTCTGAATTTAA
JMSF042H06-           TGGTGCCTATGGCTCAACAGGAAGGAGGGTGGCCTCTGGGACTGCAGCCTCTGAATTTAA
rJMFF013F21+                                                GGACTGCAGCNTNTGAATTTAA
rJMSF042H06+          TGGTGCCTATGGCTCAACAGGAAGGAGGGTGGCCTCTGGGACTGCAGCCTCTGAATTTAA
                      ____________________________________________________________
consensus             TGGTGCCTATGGCTCAACAGGAAGGAGGGTGGCCTCTGGGACTGCAGCCTCTGAATTTAA
 
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JMFF013F21-           GGGTAGGGGTAGTGAGAAACAGAGACTACTTGTCTGGATCGACATCTTTCAACACGTTAC
JMSF042H06-           GGGTAGGGGTAGTGA-AAACAGAGACTACTTGTCTGGATCGACATCTTTCAACACGTTAC
rJMFF013F21+          GGGTAGGGGTAGTGAGAAACAGAGACTACTTGTCTGGATCGACATCTTTCAACACGTTAC
rJMSF042H06+          GGGTAGGGGTAGTGA-AAACAGAGACTACTTGTCTGGATCGACATCTTTCAACACGTTAC
                      ____________________________________________________________
consensus             GGGTAGGGGTAGTGAGAAACAGAGACTACTTGTCTGGATCGACATCTTTCAACACGTTAC
 
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JMFF013F21-           TCAGTGAGTCCCCCGCTTCCTCTACAGATTCCTCCTCGGACTTGGACAGCGAGTCCACAG
JMSF042H06-           TCAGTGAGTCCCCCGCTTCCTCTACAGATTCCTCCTCGGACTTGGACAGCGAGTCCACAG
rJMFF013F21+          TCAGTGAGTCCCCCGCTTCCTCTACAGATTCCTCCTCGGACTTGGACAGCGAGTCCACAG
rJMSF042H06+          TCAGTGAGTCCCCCGCTTCCTCTACAGATTCCTCCTCGGACTTGGACAGCGAGTCCACAG
                      ____________________________________________________________
consensus             TCAGTGAGTCCCCCGCTTCCTCTACAGATTCCTCCTCGGACTTGGACAGCGAGTCCACAG
 
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JMFF013F21-           GGTCATTCTTCCATGACAGGAGCACAACCTTAGGAAGCCTAATTGGCGTTTCAAGAATCG
JMSF042H06-           GGTCATTCTTCCATGACAGGAGCACAACCTTAGGAAGCCTAATTGGCGTTTCAAGAATCG
rJMFF013F21+          GGTCATTCTTCCATGACAGGAGCACAACCTTAGGAAGCCTAATTGGCGTTTCAAGAATCG
rJMSF042H06+          GGTCATTNTTCCATGACAGGAGCACAACCTTAGGAAGCCTAATTGGCGTTTCAAGAATCG
                      ____________________________________________________________
consensus             GGTCATTCTTCCATGACAGGAGCACAACCTTAGGAAGCCTAATTGGCGTTTCAAGAATCG
 
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JMFF013F21-           TGAACCTCTCGAGGAGATCAACGAGGGGAAGACCCTCGAGTGTTGAAGCCAATCAAGTAG
JMSF042H06-           TGAACCTCTCGAGGAGATCAACGAGGGGAAGACCCTCGAGTGTTGAAGCCAATCAAGTAG
rJMFF013F21+          TGAACCTCTCGAGGAGATCAACGAGGGGAAGACCCTCGAGTGTTGAAGCCAATCAAGTAG
rJMSF042H06+          TGAACCTCTCGAGGAGATCAACGAGGGGAAGACCCTCGAGTGTTGAAGCCAATCAAGTAG
                      ____________________________________________________________
consensus             TGAACCTCTCGAGGAGATCAACGAGGGGAAGACCCTCGAGTGTTGAAGCCAATCAAGTAG
 
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JMFF013F21-           TCGGAAAGAAGTACACTAGGAGGCCCGGAGCCGCCTGGTGCTTCTCATTGTGCCCGAGAA
JMSF042H06-           TCGGAAAGAAGTACACTAGGAGGCCCGGAGCCGCCTGGTGCTTCTCATTGTGCCCGAGAA
rJMFF013F21+          TCGGAAAGAAGTACACTAGGAGGCCCGGAGCCGCCTGGTGCTTCTCATTGTGCCCGAGAA
rJMSF042H06+          TCGGAAAGAAGTACACTAGGAGGCCCGGAGCCGCCTGGTGCTTCTCATTGTGCCCGAGAA
                      ____________________________________________________________
consensus             TCGGAAAGAAGTACACTAGGAGGCCCGGAGCCGCCTGGTGCTTCTCATTGTGCCCGAGAA
 
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JMFF013F21-           ACAGCACTGATGGCGAGAGCGCCATAAGGAGCAACACTGCATCGCTCGGCCATTTTCTAG
JMSF042H06-           ACAGCACTGATGGCGAGAGCGCCATAAGGAGCAACACTGCATCGCTCGGCCATTTTCTAG
rJMFF013F21+          ACAGCACTGATGGCGAGAGCGCCATAAGGAGCAACACTGCATCGCTCGGCCATTTTCTAG
rJMSF042H06+          ACAGCACTGATGGCGAGAGCGCCATAAGGAGCAACACTGCATCGCTCGGCCATTTTCTAG
                      ____________________________________________________________
consensus             ACAGCACTGATGGCGAGAGCGCCATAAGGAGCAACACTGCATCGCTCGGCCATTTTCTAG
 
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JMFF013F21-           CTGTGGAAAGACGGGCTGGAAATGGGCACCGGAGAAGCCACCATAGCCCTCTCATCTACG
JMSF042H06-           CTGTGGAAAGACGGGCTGGAAATGGGCACCGGAGAAGCCACCATAGCCCTCTCATCTACG
rJMFF013F21+          CTGTGGAAAGACGGGCTGGAAATGGGCACCGGAGAAGCCACCATAGCCCTCTCATCTACG
rJMSF042H06+          CTGTGGAAAGACGGGCTGGAAATGGGCACCGGAGAAGCCACCATAGCCCTCTCATNTACG
                      ____________________________________________________________
consensus             CTGTGGAAAGACGGGCTGGAAATGGGCACCGGAGAAGCCACCATAGCCCTCTCATCTACG
 
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JMFF013F21-           GGCCAGACGAATACGCTTTGGTGCAGCACGATCGAGAGTCGTCGAATTCACTCTTCGCCA
JMSF042H06-           GGCCAGACGAATACGCTTTGGTGCAGCACGATCGAGAGTCGTCGAATTCACTCTTCGCCA
rJMFF013F21+          GGCCAGACGAATACGCTTTGGTGCAGCACGATCGAGAGTCGTCGAATTCACTCTTCGCCA
rJMSF042H06+          GGCCAGACGAATACGCTTTGGTGCAGCACGATCGAGAGTCGTCGAATTCACTNTTCGCCA
                      ____________________________________________________________
consensus             GGCCAGACGAATACGCTTTGGTGCAGCACGATCGAGAGTCGTCGAATTCACTCTTCGCCA
 
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JMFF013F21-           ATGACCGAATTGCCCCTCCCCAGCTGAGCCCATGGGCTGGAA                  
JMSF042H06-           ATGACCGAATTGCCCCTCCCCAGCTGAGCCCATGGGCTGGAAGGGCCCCGGGCAACAGGT
rJMFF013F21+          ATGACCGAATTGCCCCTCCCCAGCTGAGCCCATGGGCTGGAAGGGCCCCGGGCAACAGGT
rJMSF042H06+          ATGACCGAATTGCCCCTCCCCAGCTGAGCCCATGGGCTGGAAGGGCCCCGGGCAACAGGT
                      ____________________________________________________________
consensus             ATGACCGAATTGCCCCTCCCCAGCTGAGCCCATGGGCTGGAAGGGCCCCGGGCAACAGGT
 
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JMSF042H06-           CTTTAGACACTGAACAAG                                          
rJMFF013F21+          CTTTAGACACTGAACAAGATCATCAGGGTGTTCCACTGGTATTGTTCCCATGCATTTGTG
rJMSF042H06+          CTTTAGACACTGAACAAGATCATCAGGGTGTTCCACTGGTATTGTTCCCATGCATTTGTG
                      ____________________________________________________________
consensus             CTTTAGACACTGAACAAGATCATCAGGGTGTTCCACTGGTATTGTTCCCATGCATTTGTG
 
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rJMFF013F21+          GTTAAACATTGTGCTTATTAGACCCTTTACTTTTCAATTCATATTTTTCCCATTG     
rJMSF042H06+          GTTAAACATTGTGCTTATTAGACCCTTTACTTTTCAATTCATATTTTTCCCATTGTTTGT
                      ____________________________________________________________
consensus             GTTAAACATTGTGCTTATTAGACCCTTTACTTTTCAATTCATATTTTTCCCATTGTTTGT
 
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rJMSF042H06+          TTTGTTGAAATTTCTAAAAAAAAAGTACTCCCTTTGTAGTGAANCTAGTGATGTGAAACA
                      ____________________________________________________________
consensus             TTTGTTGAAATTTCTAAAAAAAAAGTACTCCCTTTGTAGTGAANCTAGTGATGTGAAACA