| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014C17 | Sequence | 566 | 008113 (13) | dbj|BAF47744.2| | 322 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] | 756 | 007194 (16) | emb|CAB01911.1| | 2e-117 | ADPglucose pyrophosphorylase [Ipomoea batatas] gb|AAS66988.1| ADP-glucose pyroph |
| JMFF020C05 | Sequence | 560 | 005237 (7) | ref|XP_011082888.1| | 2e-18 | PREDICTED: telomeric repeat-binding factor 1-like [Sesamum indicum] ref|XP_01108 | 734 | 007194 (16) | ref|XP_010657505.1| | 104 | PREDICTED: uncharacterized protein LOC104880931 [Vitis vinifera] ref|XP_01065750 |
| JMFF020K03 | Sequence | 558 | 008113 (13) | gb|AFL55400.1| | 1e-78 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 755 | 007194 (16) | emb|CAB01911.1| | 5e-141 | ADPglucose pyrophosphorylase [Ipomoea batatas] gb|AAS66988.1| ADP-glucose pyroph |
| JMFF020P03 | Sequence | 550 | 008113 (13) | gb|AFL55400.1| | 3e-100 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 690 | 007194 (16) | dbj|BAF47744.2| | 372 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMFF031B08 | Sequence | 523 | 005237 (7) | ref|XP_006366758.1| | 2e-10 | PREDICTED: uncharacterized protein LOC102601593 isoform X1 [Solanum tuberosum] | 628 | 007194 (16) | ref|XP_008462017.1| | 3e-18 | PREDICTED: uncharacterized protein LOC103500488 isoform X2 [Cucumis melo] |
| JMFF042O12 | Sequence | 655 | 008113 (13) | gb|AFL55400.1| | 1e-127 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 588 | 007194 (16) | dbj|BAF47744.2| | 289 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMFF044B17 | Sequence | 634 | 008113 (13) | gb|AFL55400.1| | 9e-116 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 646 | 007194 (16) | dbj|BAF47744.2| | 310 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMSF026O22 | Sequence | 651 | 005237 (7) | ref|XP_011082888.1| | 9e-25 | PREDICTED: telomeric repeat-binding factor 1-like [Sesamum indicum] ref|XP_01108 | 785 | 007194 (16) | ref|XP_009597431.1| | 120 | PREDICTED: uncharacterized protein LOC104093402 [Nicotiana tomentosiformis] |
| JMSF030B08 | Sequence | 668 | 008113 (13) | dbj|BAF47744.2| | 399 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] | 710 | 007194 (16) | dbj|BAF47744.2| | 413 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMSF037D12 | Sequence | 669 | 008113 (13) | gb|AFL55400.1| | 9e-135 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 777 | 007194 (16) | dbj|BAF47744.2| | 448 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMSF039P01 | Sequence | 646 | 005237 (7) | ref|XP_004243220.1| | 125 | PREDICTED: uncharacterized protein LOC101252503 [Solanum lycopersicum] | 982 | 007194 (16) | ref|XP_009597431.1| | 120 | PREDICTED: uncharacterized protein LOC104093402 [Nicotiana tomentosiformis] |
| JMSF047G17 | Sequence | 695 | 008113 (13) | gb|AFL55400.1| | 6e-141 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 705 | 007194 (16) | dbj|BAF47744.2| | 403 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMSF047H12 | Sequence | 700 | 008113 (13) | gb|AFL55400.1| | 5e-143 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 797 | 007194 (16) | dbj|BAF47744.2| | 412 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMSF050E23 | Sequence | 666 | 008113 (13) | gb|AFL55400.1| | 3e-134 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 690 | 007194 (16) | dbj|BAF47744.2| | 394 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMSF052E19 | Sequence | 633 | 008113 (13) | gb|AFL55400.1| | 1e-118 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 926 | 007194 (16) | dbj|BAF47744.2| | 535 | ADP-glucose pyrophosphorylase alpha subunit IbAGPa1 [Ipomoea batatas] |
| JMSF053E19 | Sequence | 664 | 008113 (13) | gb|AFL55400.1| | 5e-128 | ADP-glucose pyrophosphorylase small subunit 1 [Ipomoea batatas] gb|AJA32526.1| A | 865 | 007194 (16) | emb|CAB01911.1| | 1e-158 | ADPglucose pyrophosphorylase [Ipomoea batatas] gb|AAS66988.1| ADP-glucose pyroph |
This contig is upended
. : . : . : . : . : . :
rJMSF052E19+ TCT
____________________________________________________________
consensus TCT
. : . : . : . : . : . :
rJMSF052E19+ CATGAAGATTGATGAAGAAGGAAGGATTATTGAATTTGCAGAGAAACCAAAAGGAGAACA
____________________________________________________________
consensus CATGAAGATTGATGAAGAAGGAAGGATTATTGAATTTGCAGAGAAACCAAAAGGAGAACA
. : . : . : . : . : . :
rJMSF053E19+ TTGATGATAAGAAAGCTAAAGA
rJMSF052E19+ GTTGAAAGCTATGAAGGTTGATACCACTATTTTAGGTCTTGATGATAAGAAAGCTAAAGA
____________________________________________________________
consensus GTTGAAAGCTATGAAGGTTGATACCACTATTTTAGGTCTTGATGATAAGAAAGCTAAAGA
. : . : . : . : . : . :
rJMSF053E19+ GAGGCCTTNTNTTGCAAGTATGGGAATATATGTTGTAAGTAAAAATGTGATGGTTAACCT
rJMSF037D12+ AAGTATGGGAATATATGTTGTAAGTAAAAATGTGATGGTTAACCT
rJMSF052E19+ GAGGCCTTATATTGCAAGTATGGGAATATATGTTGTAAGTAAAAATGTGATGGTTAACCT
rJMSF047H12+ AGTATGGGAATATATGGTGTAAGTAAAAATGTGATGGTTAACCT
____________________________________________________________
consensus GAGGCCTTATATTGCAAGTATGGGAATATATGTTGTAAGTAAAAATGTGATGGTTAACCT
. : . : . : . : . : . :
rJMSF053E19+ ACTTCGACAAAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
rJMSF037D12+ ACTTCGACAAAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
rJMSF030B08+ AAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
rJMSF047G17+ AATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
rJMSF050E23+ GAAGTGAAGTTATTCCTGGTGCAAC
rJMSF052E19+ ACTTCGACAAAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
rJMSF047H12+ ACTTCGACAAAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
rJMFF014C17+ TTCGACAAAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCNTGGTGCAAC
rJMFF020K03+ TCGACAAAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
____________________________________________________________
consensus ACTTCGACAAAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTTATTCCTGGTGCAAC
. : . : . : . : . : . :
rJMSF053E19+ AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMSF037D12+ AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMSF030B08+ AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMSF047G17+ AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMSF050E23+ AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMSF052E19+ AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMSF047H12+ AT-CCCTTGGATNGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMFF014C17+ ATCCCCTTGGATTGAGAGTGCAAGCTTATTTGTTTTGATGGCTACTGGGAAGATATTGGT
rJMFF020K03+ AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
rJMFF020P03+ GATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
____________________________________________________________
consensus AT-CCCTTGGATTGAGAGTGCAAGCTTATTTG-TTTGATGGCTACTGGGAAGATATTGGT
. : . : . : . : . : . :
rJMSF053E19+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMSF037D12+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMSF030B08+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMSF047G17+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMSF050E23+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMSF052E19+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMSF047H12+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMFF014C17+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMFF020K03+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMFF020P03+ ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
rJMFF044B17+ AGAAGCCTTTACCAGATTTC
____________________________________________________________
consensus ACAATTGAAGCCTTCTATAATGCCAATTTGGGAATCACAAAGAAGCCTTTACCAGATTTC
. : . : . : . : . : . :
rJMSF053E19+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMSF037D12+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMSF030B08+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMSF047G17+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMSF050E23+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMSF052E19+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMSF047H12+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMFF014C17+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMFF020K03+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMFF020P03+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMFF042O12+ CCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
rJMFF044B17+ AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
____________________________________________________________
consensus AGCTTCTATGACCGATCAGCTCCCATTTACACTCAACCTCGATATTTACCTCCTTCTAAA
. : . : . : . : . : . :
rJMSF053E19+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMSF037D12+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMSF030B08+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMSF047G17+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMSF050E23+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMSF052E19+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMSF047H12+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMFF014C17+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAGCTGT
rJMFF020K03+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMFF020P03+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAGCTGT
rJMFF042O12+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
rJMFF044B17+ ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
____________________________________________________________
consensus ATGCTTGATGCTGATGTCACAGACAGCGTTATTGGTGAAGGTTGTGTAATCAAGAACTGT
. : . : . : . : . : . :
rJMSF053E19+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMSF037D12+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMSF030B08+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMSF047G17+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMSF050E23+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMSF052E19+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMSF047H12+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMFF014C17+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMFF020K03+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMFF020P03+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMFF042O12+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
rJMFF044B17+ AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
____________________________________________________________
consensus AAAATTCACCATTCTGTGGTTGGACTTAGATCATGCATATCGGAGGGAGCAATAATAGAA
. : . : . : . : . : . :
rJMSF053E19+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMSF037D12+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMSF030B08+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMSF047G17+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMSF050E23+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMSF052E19+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMSF047H12+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMFF014C17+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMFF020K03+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMFF020P03+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMFF042O12+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
rJMFF044B17+ GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
____________________________________________________________
consensus GATACATTATTGATGGGAGCAGATTACTATGAGACGGATGCTGACAGGAGGCTTCTGGCT
. : . : . : . : . : . :
rJMSF053E19+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMSF037D12+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMSF030B08+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMSF047G17+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMSF050E23+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMSF052E19+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMSF047H12+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMFF014C17+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMFF020K03+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMFF020P03+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMFF042O12+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
rJMFF044B17+ GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
____________________________________________________________
consensus GCAAAGGGAAGTGTTCCAATTGGAATTGGCAGGAATTCACACATCAAAAGAGCAATCATT
. : . : . : . : . : . :
rJMSF053E19+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMSF037D12+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMSF030B08+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMSF047G17+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMSF050E23+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMSF052E19+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMSF047H12+ GNCAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMFF014C17+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMFF020K03+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMFF020P03+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMFF042O12+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
rJMFF044B17+ GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
____________________________________________________________
consensus GACAAGAATGCTCGTATTGGGAATGATGTGAAGATCATTAACAGTGAAAATATTCAAGAA
. : . : . : . : . : . :
rJMSF053E19+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMSF037D12+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMSF030B08+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMSF047G17+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMSF050E23+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMSF052E19+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMSF047H12+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMFF014C17+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMFF020K03+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMFF020P03+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMFF042O12+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMFF044B17+ GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
rJMFF031B08- AGTGGGATCGTCACAATCATCAAGGAT
rJMFF020C05- AGTGGGATCGTCACAATCATCAAGGAT
____________________________________________________________
consensus GCAGCTAGGGAAACTGAAGGATATTTCATTAAAAGTGGGATCGTCACAATCATCAAGGAT
. : . : . : . : . : . :
rJMSF053E19+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMSF037D12+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMSF030B08+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMSF047G17+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMSF050E23+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMSF052E19+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMSF047H12+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMFF014C17+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMFF020K03+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMFF020P03+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMFF042O12+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMFF044B17+ GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMFF031B08- GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
rJMFF020C05- GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
____________________________________________________________
consensus GCATTGATTCCCAGTGGAATCATCATCTAGAAGTACTTAAAAAGAAGTATTTGAAAATCA
. : . : . : . : . : . :
rJMSF053E19+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMSF037D12+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMSF030B08+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMSF047G17+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMSF050E23+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMSF052E19+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMSF047H12+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMFF014C17+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMFF020K03+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMFF020P03+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMFF042O12+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMFF044B17+ TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMFF031B08- TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
rJMFF020C05- TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
____________________________________________________________
consensus TATGTACATGTAGTGTAGCCGTTAGAGAGACTAATGGTGCATCCTGTTAAACCTTCATTT
. : . : . : . : . : . :
rJMSF053E19+ TAGTTCTAAATTTT
rJMSF037D12+ TAGTTCTAAATTTT
rJMSF030B08+ T
rJMSF047G17+ TAGTTCTAAATT
rJMSF050E23+ TAGTTCT
rJMSF052E19+ TAGTTCTAAATTTT
rJMSF047H12+ NAGTTCTAAATTTT
rJMFF014C17+ TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCAT
rJMFF020K03+ TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCATCT
rJMFF020P03+ TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCATCT
rJMFF042O12+ TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCATCTCTATGACGCTTTTTTCCC
rJMFF044B17+ TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCATCTCTATGACGCTTTTTTCCC
rJMFF031B08- TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCATCTCTATGACGCTTTTTTCCCAG
rJMFF020C05- TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCATCTCTATGACGCTTTTTTCCCAG
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consensus TAGTTCTAAATTTTTAAATAATAAAGCATCATCGTCATCTCTATGACGCTTTTTTCCCAG
. : . : . : . : . : . :
rJMFF031B08- CCTAAGGCATTTAACTGGGGGATTTGGGGCTAGGATTGAGATGATAGGCAAATACAGGTA
rJMFF020C05- CCTAAGGCATTTAATTGGGGGATTTGGGGCTAGGATTGAGATGATAGGCAAATACAGGTA
____________________________________________________________
consensus CCTAAGGCATTTAATTGGGGGATTTGGGGCTAGGATTGAGATGATAGGCAAATACAGGTA
. : . : . : . : . : . :
rJMFF031B08- TAAACTCTTGAACCAACTTCCCTCAAAGCTATTTGATGCCTCTTTTGTTTTGCTACCAGC
rJMFF020C05- TAAACTCTTGAACCAACTTCCCTCAAAGCTATTTGATGCCTCTTTTGTTTTGCTACCAGC
____________________________________________________________
consensus TAAACTCTTGAACCAACTTCCCTCAAAGCTATTTGATGCCTCTTTTGTTTTGCTACCAGC
. : . : . : . : . : . :
rJMFF031B08- CGGCATTACAAAAGATTTCCTCCTTCACATATACGAATAACGTGGAAGATATAGCCCACT
rJMFF020C05- CGGCATTACAAAAGATTTCCTCCTTCACATATACGAATAACGTGGAAGATATAGCCCACT
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consensus CGGCATTACAAAAGATTTCCTCCTTCACATATACGAATAACGTGGAAGATATAGCCCACT
. : . : . : . : . : . :
rJMFF031B08- CAGACAAAGAGTCCAAAATGTTTTTCATTTTAAGAGTAGCATAGTTTCAAAATGACTTCC
rJMFF020C05- CAGACAAAGAGTCCAAAATGTTTTTCATTTTAAGAGTAGCATAGTTTCAAAATGACTTCC
rJMSF026O22- CCAAAATGTTTTTCATTTTAAGAGTAGCATAGTTTCAAAATGACTTCC
rJMSF039P01- GCATAGTTTCAAAATGACTTCC
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consensus CAGACAAAGAGTCCAAAATGTTTTTCATTTTAAGAGTAGCATAGTTTCAAAATGACTTCC
. : . : . : . : . : . :
rJMFF031B08- TGAATTTTATCTGAAGCACAAGGTTCTCCATTTGTCCTTGAGATCAGCTGGCATACGGGT
rJMFF020C05- TGAATTTTATCTGAAGCACAAGGTTCTCCATTTGTCCTTGAGATCAGCTGGCATACGGGT
rJMSF026O22- TGAATTTTATCTGAAGCACAAGGTTCTCCATTTGTCCTTGAGATCAGCTGGCATACGGGT
rJMSF039P01- TGAATTTTATCTGAAGCACAAGGTTCTCCATTTGTCCTTGAGATCAGCTGGCATACGGGT
____________________________________________________________
consensus TGAATTTTATCTGAAGCACAAGGTTCTCCATTTGTCCTTGAGATCAGCTGGCATACGGGT
. : . : . : . : . : . :
rJMFF031B08- TGGATGAAACACATGACGACCAAAGTCTAAGATCTTCCTCCAAGGAATATTTTTGTTAGC
rJMFF020C05- TGGATGAAACACATGACGACCAAAGTCTAAGATCTTCCTCCAAGGAATATTTTTGTTAGC
rJMSF026O22- TGGATGAAACACATGACGACCAAAGTCTAAGATCTTCCTCCAAGGAATATTTTTGTTAGC
rJMSF039P01- TGGATGAAACACATGACGACCAAAGTCTAAGATCTTCCTCCAAGGAATATTTTTGTTAGC
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consensus TGGATGAAACACATGACGACCAAAGTCTAAGATCTTCCTCCAAGGAATATTTTTGTTAGC
. : . : . : . : . : . :
rJMFF031B08- CGAAATTGAGAATTTATGAACACCTTCCTGAAGCATTTCTTCCTCTTCAGTGCTCCACAT
rJMFF020C05- CGAAATTGAGAATTTATGAACACCTTCCTGAAGCATTTCTTCCTCTTCAGTGCTCCACAT
rJMSF026O22- CGAAATTGAGAATTTATGAACACCTTCCTGAAGCATTTCTTCCTCTTCAGTGCTCCACAT
rJMSF039P01- CGAAATTGAGAATTTATGAACACCTTCCTGAAGCATTTCTTCCTCTTCAGTGCTCCACAT
____________________________________________________________
consensus CGAAATTGAGAATTTATGAACACCTTCCTGAAGCATTTCTTCCTCTTCAGTGCTCCACAT
. : . : . : . : . : . :
rJMFF031B08- T
rJMFF020C05- TAATTTTTGACGTCTTCCATTTGGAAATTGATTTCTCTGCAATGGTGAATACTCTTCAGC
rJMSF026O22- TAATTTTTGACGTCTTCCATTTGGAAATTGATTTCTCTGCAATGGTGAATACTCTTCAGC
rJMSF039P01- TAATTTTTGACGTCTTCCATTTGGAAATTGATTTCTCTGCAATGGTGAATACTCTTCAGC
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consensus TAATTTTTGACGTCTTCCATTTGGAAATTGATTTCTCTGCAATGGTGAATACTCTTCAGC
. : . : . : . : . : . :
rJMFF020C05- TTGTTTCGGCTTGTCAGGGGAACTAGTCTCCCCAGTTAGCCCTGAAA
rJMSF026O22- TTGTTTCGGCTTGTCAGGGGAACTAGTCTCCCCAGTTAGCCCTGAAAATTTCTTTGGTGA
rJMSF039P01- TTGTTTCGGCTTGTCAGGGGAACTAGTCTCCCCAGTTAGCCCTGAAAATTTCTTTGGTGA
____________________________________________________________
consensus TTGTTTCGGCTTGTCAGGGGAACTAGTCTCCCCAGTTAGCCCTGAAAATTTCTTTGGTGA
. : . : . : . : . : . :
rJMSF026O22- GAAAGCTGTCCGGCTTGACCTTTTAGAATCAGAATTTAAAGGTTGACCCTCAATTTCATT
rJMSF039P01- GAAAGCTGTCCGGCTTGACCTTTTAGAATCAGAATTTAAAGGTTGACCCTCAATTTCATT
____________________________________________________________
consensus GAAAGCTGTCCGGCTTGACCTTTTAGAATCAGAATTTAAAGGTTGACCCTCAATTTCATT
. : . : . : . : . : . :
rJMSF026O22- TGATTCTTTATTGCGGTTGCGTCGTCCCAAAACAGCCTCAAATTCTCTAGATGTTGAAGC
rJMSF039P01- TGATTCTTTATTGCGGTTGCGTCGTCCCAAAACAGCCTCAAATTCTCTAGATGTTGAAGC
____________________________________________________________
consensus TGATTCTTTATTGCGGTTGCGTCGTCCCAAAACAGCCTCAAATTCTCTAGATGTTGAAGC
. : . : . : . : . : . :
rJMSF026O22- ACCAGTCTCATCCCTTCTCTTGGCTTTCATATGCAACTGGGATTCAGGTTCTTTATTCGC
rJMSF039P01- ACCAGTCTCATCCCTTCTCTTGGCTTTCATATGCAACTGGGATTCAGGTTCTTTATTCGC
____________________________________________________________
consensus ACCAGTCTCATCCCTTCTCTTGGCTTTCATATGCAACTGGGATTCAGGTTCTTTATTCGC
. : . : . : . : . : . :
rJMSF026O22- GAAGGGCACTGCAGATTCACGTGTTTTTCCCTGCATCTGCTCAGCTTCTGCACCACCACC
rJMSF039P01- GAAGGGCACTGCAGATTCACGTGTTTTTCCCTGCATCTGCTCAGCTTCTGCACCACCACC
____________________________________________________________
consensus GAAGGGCACTGCAGATTCACGTGTTTTTCCCTGCATCTGCTCAGCTTCTGCACCACCACC
. : . : . : . : . : . :
rJMSF026O22- AGCTTCATTTTCCTTCCCCCCAGCTTTCATTTGTACAGCTTTCTTCATCTTCTTTTCTCC
rJMSF039P01- AGCTTCATTTTCCTTCCCCCCAGCTTTCATTTGTACAGCTTTCTTCATCTTCTTTTCTCC
____________________________________________________________
consensus AGCTTCATTTTCCTTCCCCCCAGCTTTCATTTGTACAGCTTTCTTCATCTTCTTTTCTCC
. : . : . : . : . : . :
rJMSF026O22- TTCAGGTATTTCTCTCGGGTGGCAATCTTCAACATCTCTATCTAGTAGTTGGTCATCAAC
rJMSF039P01- TTCAGGTATTTCTCTCGGGTGGCAATCTTCAACATCTCTATCTAGTAGTTGGTCATCAAC
____________________________________________________________
consensus TTCAGGTATTTCTCTCGGGTGGCAATCTTCAACATCTCTATCTAGTAGTTGGTCATCAAC
. : . : . : . : . : . :
rJMSF026O22- CTCTGGTTCATTTTCTGCANGCATTGGTTT
rJMSF039P01- CTCTGGTTCATTTTCTGCAAGCATTTGTTTTGCTTTTCCCCTAATTTTCTTTTTTCTATC
____________________________________________________________
consensus CTCTGGTTCATTTTCTGCAAGCATTTGTTTTGCTTTTCCCCTAATTTTCTTTTTTCTATC
. : . : . : . : . : . :
rJMSF039P01- AGGTTTATTTACCATATTGTAGTTGCTTCGTCTCAAAAGTGCCTCAAATTCTCTAGATAT
____________________________________________________________
consensus AGGTTTATTTACCATATTGTAGTTGCTTCGTCTCAAAAGTGCCTCAAATTCTCTAGATAT
. : . : . : . : . : . :
rJMSF039P01- TGAAGCACCAGTTTCAACCCTTCTCTTGGCTTTCAAATGCAACTGGGGGGTTCAGGTTCT
____________________________________________________________
consensus TGAAGCACCAGTTTCAACCCTTCTCTTGGCTTTCAAATGCAACTGGGGGGTTCAGGTTCT
. : . : . : . : . : . :
rJMSF039P01- TCATTCATGAAAGGATGCTGCAGATTCATGTGCTTTTNCCCNGGCATCTGGGTCAGCNTT
____________________________________________________________
consensus TCATTCATGAAAGGATGCTGCAGATTCATGTGCTTTTNCCCNGGCATCTGGGTCAGCNTT
. : . : . : . : . : . :
rJMSF039P01- TTGCACCCCCCACCATTTTCATTTTCCCTTCCTGNCCANCTTGGCATTTGNGCNGCTTTC
____________________________________________________________
consensus TTGCACCCCCCACCATTTTCATTTTCCCTTCCTGNCCANCTTGGCATTTGNGCNGCTTTC