| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012M04 | Sequence | 507 | 003662 (6) | 726 | 007193 (3) | ref|XP_009776322.1| | 8e-72 | PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009 | |||
| JMSF021H13 | Sequence | 707 | 003662 (6) | ref|XP_011091656.1| | 1e-11 | PREDICTED: putative zinc transporter At3g08650 [Sesamum indicum] ref|XP_01109165 | 790 | 007193 (3) | ref|XP_009776322.1| | 1e-74 | PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009 |
| JMSF039O06 | Sequence | 689 | 003662 (6) | ref|XP_006345425.1| | 3e-06 | PREDICTED: putative zinc transporter At3g08650-like [Solanum tuberosum] | 814 | 007193 (3) | ref|XP_009776322.1| | 2e-79 | PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009 |
This contig is upended
. : . : . : . : . : . :
rJMSF021H13+ AGGACTGCAGCAAGTTCATTAACTTCTGTAAC
rJMSF039O06+ ANGAGGACTGCAGCAAGTTCATTAACTTCTGTAAC
____________________________________________________________
consensus ANGAGGACTGCAGCAAGTTCATTAACTTCTGTAAC
. : . : . : . : . : . :
rJMSF012M04+ CCTTCAGTCGGTTTTGTGCTGCCTTGCTATTGCCC
rJMSF021H13+ CGGCTTTCCCGATGAGCTCTCTTACCCTTCAGTCGGTTTTGTGCTGCCTTGCTATTGCCC
rJMSF039O06+ CGGC-TTCCCGATGAGCTCTCTTACCCTTCAGTCGGTTTTGTGCTGCCTTGCTATTGCCC
____________________________________________________________
consensus CGGCTTTCCCGATGAGCTCTCTTACCCTTCAGTCGGTTTTGTGCTGCCTTGCTATTGCCC
. : . : . : . : . : . :
rJMSF012M04+ TCCACGCACTGGCCGAGGGGCTTGCATTAGGGGTTGCTGCACCCAAAGCTTATGGATTTG
rJMSF021H13+ TCCACGCACTGGCCGAGGGGCTTGCATTAGGGGTTGCTGCACCCAAAGCTTATGGATTTG
rJMSF039O06+ TCCACGCACTGGCCGAGGGGCTTGCATTAGGGGTTGCTGCACCCAAAGCTTATGGATTTG
____________________________________________________________
consensus TCCACGCACTGGCCGAGGGGCTTGCATTAGGGGTTGCTGCACCCAAAGCTTATGGATTTG
. : . : . : . : . : . :
rJMSF012M04+ GCCGCCACATGGTGCTCCCCGTCTCCCTGCACGGTCTTCCTAGGGGTGCGGCCGTGGCAA
rJMSF021H13+ GCCGCCACATGGTGCTCCCCGTCTCCCTGCACGGTCTTCCTAGGGGTGCGGCCGTGGCAA
rJMSF039O06+ GCCGCCACATGGTGCTCCCCGTCTCCCTGCACGGTCTTCCTAGGGGTGCGGCCGTGGCAA
____________________________________________________________
consensus GCCGCCACATGGTGCTCCCCGTCTCCCTGCACGGTCTTCCTAGGGGTGCGGCCGTGGCAA
. : . : . : . : . : . :
rJMSF012M04+ GTTGCATTTTCGGAGCGACTGACAGCTGGCACGGGTCCCTCTTAGCGGCTGCGCTCATCG
rJMSF021H13+ GTTGCATTTTCGGAGCGACTGACAGCTGGCACGGGTCCCTCTTAGCGGCTGCGCTCATCG
rJMSF039O06+ GTTGCATTTTCGGAGCGACTGACAGCTGGCACGGGTCCCTCTTAGCGGCTGCGCTCATCG
____________________________________________________________
consensus GTTGCATTTTCGGAGCGACTGACAGCTGGCACGGGTCCCTCTTAGCGGCTGCGCTCATCG
. : . : . : . : . : . :
rJMSF012M04+ GGTTTGTCGGCCCATCATCAGCAATCGGAGCCATACTTGCTGGGATCGATTACAGTGGTC
rJMSF021H13+ GGTTTGTCGGCCCATCATCAGCAATCGGAGCCATACTTGCTGGGATCGATTACAGTGGTC
rJMSF039O06+ GGTTTGTCGGCCCATCATCAGCAATCGGAGCCATACTTGCTGGGATCGATTACAGTGGTC
____________________________________________________________
consensus GGTTTGTCGGCCCATCATCAGCAATCGGAGCCATACTTGCTGGGATCGATTACAGTGGTC
. : . : . : . : . : . :
rJMSF012M04+ TCGACCACATCATGATGCTCGCGTGTGGGGCCCTACTCCCGTGCTTTTGGAGCATCGTGA
rJMSF021H13+ TCGACCACATCATGATGCTCGCGTGTGGGGCCCTACTCCCGTGCTTTTGGAGCATCGTGA
rJMSF039O06+ TCGGCCACATCATGATGCTCGCGTGTGGGGCCCTACTCCCGTGCTTTTGGAGCATCGTGA
____________________________________________________________
consensus TCGACCACATCATGATGCTCGCGTGTGGGGCCCTACTCCCGTGCTTTTGGAGCATCGTGA
. : . : . : . : . : . :
rJMSF012M04+ AGAGAGCCGTGAGCCTGGATAAGCAGAAGGGTGTCGCTGGGCTCATAATGGGCGCTTTGT
rJMSF021H13+ AGAGAGCCGTGAGCCTGGATAAGCAGAAGGGTGTCGCTGGGCTCATAATGGGCGCTTTGT
rJMSF039O06+ AGAGAGCCGTGAGCCTGGATAAGCAGAAGGGTGTCGCTGGGCTCATAATGGGCGCTTTGT
____________________________________________________________
consensus AGAGAGCCGTGAGCCTGGATAAGCAGAAGGGTGTCGCTGGGCTCATAATGGGCGCTTTGT
. : . : . : . : . : . :
rJMSF012M04+ TCGCCAGCGTCTGCCTCACGTTTACCAAGTTGGTTTGCTTGCACACTCCTTACTGCAACT
rJMSF021H13+ TCGCCAGCGTCTGCCTCACGTTTACCAAGTTGGTTTGCTTGCACACTCCTTACTGCAACT
rJMSF039O06+ TCGCCAGCGTCTGCCTCACGTTTACCAAGTTGGTTTGCTTGCACACTCCTTACTGCAACT
____________________________________________________________
consensus TCGCCAGCGTCTGCCTCACGTTTACCAAGTTGGTTTGCTTGCACACTCCTTACTGCAACT
. : . : . : . : . : . :
rJMSF012M04+ CTGCACCCGAGGCTGTTAGATGATGATGGACTATCGCGACTCTCATCCATGTCAGGTATT
rJMSF021H13+ CTGCACCCGAGGCTGTTAGATGATGATGGACTATCGCGACTCTCATCCATGTCAGGTATT
rJMSF039O06+ CTGCACCCGAGGCTGTTAGATGATGATGGACTATCGCGACTCTCATCCATGTCAGGTATT
____________________________________________________________
consensus CTGCACCCGAGGCTGTTAGATGATGATGGACTATCGCGACTCTCATCCATGTCAGGTATT
. : . : . : . : . : . :
rJMSF012M04+ TTTGACTCCCTTAACCAACCTCTATGAACATCATTCTTGAAAATCAGGTCCTAACTCGAA
rJMSF021H13+ TTTGACTCCCTTAACCAACCTCTATGAACATCATTCTTGAAAATCAGGTCCTAACTCGAA
rJMSF039O06+ TTTGACTCCCTTAACCAACCTCTATGAACATCATTCTTGAAAATCAGGTCCTAACTCGAA
____________________________________________________________
consensus TTTGACTCCCTTAACCAACCTCTATGAACATCATTCTTGAAAATCAGGTCCTAACTCGAA
. : . : . : . : . : . :
rJMSF012M04+ GAACGAGAGCAACAAAGCTTATAAGACATCGCAAAGAGACGAGACAAGTTGTTCATTTGT
rJMSF021H13+ GAACGAGAGCAACAAAGCTTATAAGACATCGCAAAGAGACGAGACAAGTTGTTCATTTGT
rJMSF039O06+ GAACGAGAGCAACAAAGCTTATAAGACATCGCAAAGAGACGAGACAAGTTGTTCATTTGT
____________________________________________________________
consensus GAACGAGAGCAACAAAGCTTATAAGACATCGCAAAGAGACGAGACAAGTTGTTCATTTGT
. : . : . : . : . : . :
rJMSF012M04+ ACATCATATCTATACTATACGCTGGATACTCTGTTAGATGTATTATGGATTCCTTTCTCA
rJMSF021H13+ ACATCATATCTATACTATACGCTGGATACTCTGTTAGATGTATTATGGATTCCTTTCTCA
rJMSF039O06+ ACATCATATCTATACTATACGCTGGATACTCTGTTAGATGTATTATGGATTCCTTTCTCA
____________________________________________________________
consensus ACATCATATCTATACTATACGCTGGATACTCTGTTAGATGTATTATGGATTCCTTTCTCA
. : . : . : . : . : . :
rJMSF012M04+ TTCGTGACATAACAATCGGGAACGAAAACTA
rJMSF021H13+ TTCGTGACATAACAATCGGGAACGAAAACTA
rJMSF039O06+ TTCGTGACATAACAATCGGGAACGAAAACTATATCATCTTTGTGTATATGTGAGAACAAT
____________________________________________________________
consensus TTCGTGACATAACAATCGGGAACGAAAACTATATCATCTTTGTGTATATGTGAGAACAAT