| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF022J04 | Sequence | 641 | 009366 (5) | ref|XP_009802964.1| | 4e-87 | PREDICTED: probable aspartyl aminopeptidase [Nicotiana sylvestris] | 733 | 007191 (4) | ref|XP_002266672.1| | 9e-83 | PREDICTED: probable aspartyl aminopeptidase isoform X1 [Vitis vinifera] ref|XP_ |
| JMSF026N19 | Sequence | 650 | 009366 (5) | ref|XP_009802964.1| | 4e-86 | PREDICTED: probable aspartyl aminopeptidase [Nicotiana sylvestris] | 729 | 007191 (4) | ref|XP_002266672.1| | 3e-70 | PREDICTED: probable aspartyl aminopeptidase isoform X1 [Vitis vinifera] ref|XP_ |
| JMSF033E13 | Sequence | 659 | 009366 (5) | ref|XP_009802964.1| | 5e-90 | PREDICTED: probable aspartyl aminopeptidase [Nicotiana sylvestris] | 740 | 007191 (4) | ref|XP_002266672.1| | 5e-73 | PREDICTED: probable aspartyl aminopeptidase isoform X1 [Vitis vinifera] ref|XP_ |
| JMSF039L13 | Sequence | 641 | 009366 (5) | ref|XP_009802964.1| | 3e-87 | PREDICTED: probable aspartyl aminopeptidase [Nicotiana sylvestris] | 797 | 007191 (4) | ref|XP_002266672.1| | 3e-83 | PREDICTED: probable aspartyl aminopeptidase isoform X1 [Vitis vinifera] ref|XP_ |
This contig is upended
. : . : . : . : . : . :
rJMSF022J04+ TGCGGACATGGCTCAT
rJMSF039L13+ TCTGCGGACATGGCTCAT
____________________________________________________________
consensus TCTGCGGACATGGCTCAT
. : . : . : . : . : . :
rJMSF033E13+ TACTGACCAGCATGAAGAGCACCACCGCCCAGAGTTGCAGAAA
rJMSF026N19+ CATGAAGAGCACCACCGCCCAGAGNTGCAGAAA
rJMSF022J04+ GGAGTTCACCCAAATTTTACTGACAAGCATGAAGAGCACCACCGCCCAGAGTTGCAGAAA
rJMSF039L13+ GGAGTTCACCCAAATTTTACTGACAAGCATGAAGAGCACCACCGCCCAGAGTTGCAGAAA
____________________________________________________________
consensus GGAGTTCACCCAAATTTTACTGACAAGCATGAAGAGCACCACCGCCCAGAGTTGCAGAAA
. : . : . : . : . : . :
rJMSF033E13+ GGGCTTGTTATCAAGCACAATGCAAGTCAGCGCTATGCGACAAGTGGAGTTACATCTTTT
rJMSF026N19+ GGGCNTGTTATCAAGCACAATGCAAGTCAGCGCTATGCGACAAGTGGAGTTACATCTTTT
rJMSF022J04+ GGGCTTGTTATCAAGCACAATGCAAGTCAGCGCTATGCGACAAGTGGAGTTACATCTTTT
rJMSF039L13+ GGGCTTGTTATCAAGCACAATGCAAGTCAGCGCTATGCGACAAGTGGAGTTACATCTTTT
____________________________________________________________
consensus GGGCTTGTTATCAAGCACAATGCAAGTCAGCGCTATGCGACAAGTGGAGTTACATCTTTT
. : . : . : . : . : . :
rJMSF033E13+ CTTTTCAAAGAAGTTGCAAGAATCCACAACCTTCCGACTCAGGATTTTGTGGTTAGAAAT
rJMSF026N19+ CTTTTCAAAGAAGTTGCAAGAATCCACAACCTTCCGACTCAGGATTTTGTGGTTAGAAAT
rJMSF022J04+ CTTTTCAAAGAAGTTGCAAGAATCCACAACCTTCCGACTCAGGATTTTGTGGTTAGAAAT
rJMSF039L13+ CTTTTCAAAGAAGTTGCAAGAATCCACAACCTTCCGACTCAGGATTTTGTGGTTAGAAAT
____________________________________________________________
consensus CTTTTCAAAGAAGTTGCAAGAATCCACAACCTTCCGACTCAGGATTTTGTGGTTAGAAAT
. : . : . : . : . : . :
rJMSF033E13+ GATATGGGATGTGGATCGACTATAGGTCCCATACTTGCTTCAGGGGTTGGTATTCGCACA
rJMSF026N19+ GATATGGGATGTGGATCGACTATAGGTCCCATACTTGCTTCAGGGGTTGGTATTCGCACA
rJMSF022J04+ GATATGGGATGTGGATCGACTATAGGTCCCATACTTGCTTCAGGGGTTGGTATTCGCACA
rJMSF039L13+ GATATGGGATGTGGATCGACTATAGGTCCCATACTTGCTTCAGGGGTTGGTATTCGCACA
____________________________________________________________
consensus GATATGGGATGTGGATCGACTATAGGTCCCATACTTGCTTCAGGGGTTGGTATTCGCACA
. : . : . : . : . : . :
rJMSF033E13+ GTTGATTGTGGCATTGCTCAGTTATCCATGCACAGTGTGAGAGAGATATGTGGAAAGGAA
rJMSF026N19+ GTTGATTGTGGCATTGCTCAGTTATCCATGCACAGTGTGAGAGAGATATGTGGAAAGGAA
rJMSF022J04+ GTTGATTGTGGCATTGCTCAGTTATCCATGCACAGTGTGAGAGAGATATGTGGAAAGGAA
rJMSF039L13+ GTTGATTGTGGCATTGCTCAGTTATCCATGCACAGTGTGAGAGAGATATGTGGAAAGGAA
____________________________________________________________
consensus GTTGATTGTGGCATTGCTCAGTTATCCATGCACAGTGTGAGAGAGATATGTGGAAAGGAA
. : . : . : . : . : . :
rJMSF033E13+ GATATTGATATTGCATACAAGCACTTCAAGGCATTTTATCAGACTTTCTCAAGTGTTGAC
rJMSF026N19+ GATATTGATATTGCATACAAGCACTTCAAGGCATTTTATCAGACTTTCTCAAGTGTTGAC
rJMSF022J04+ GATATTGATATTGCATACAAGCACTTCAAGGCATTTTATCAGACTTTCTCAAGTGTTGAC
rJMSF039L13+ GATATTGATATTGCATACAAGCACTTCAAGGCATTTTATCAGACTTTCTCAAGTGTTGAC
____________________________________________________________
consensus GATATTGATATTGCATACAAGCACTTCAAGGCATTTTATCAGACTTTCTCAAGTGTTGAC
. : . : . : . : . : . :
rJMSF033E13+ AGGAAGCTGAATGTGGACTGCTGATAGGTCTCCCAGATTTCATTTGGTTGGTGACAGAAT
rJMSF026N19+ AGGAAGCTGAATGTGGACTGCTGATAGGTCTCCCAGATTTCATTTGGTTGGTGACAGAAT
rJMSF022J04+ AGGAAGCTGAATGTGGACTGCTGATAGGTCTCCCAGATTTCATTTGGTTGGTGACAGAAT
rJMSF039L13+ AGGAAGCTGAATGTGGACTGCTGATAGGTCTCCCAGATTTCATTTGGTTGGTGACAGAAT
____________________________________________________________
consensus AGGAAGCTGAATGTGGACTGCTGATAGGTCTCCCAGATTTCATTTGGTTGGTGACAGAAT
. : . : . : . : . : . :
rJMSF033E13+ TGGAGACATGGTTTCCACAGTTCAACTTAGCTGCTTCTAGCTTCTGTTTCAGCTCAGACA
rJMSF026N19+ TGGAGACATGGTTTCCACAGTTCAACTTAGCTGCTTCTAGCTTCTGTTTCAGCTCAGACA
rJMSF022J04+ TGGAGACATGGTTTCCACAGTTCAACTTAGCTGCTTCTAGCTTCTGTTTCAGCTCAGACA
rJMSF039L13+ TGGAGACATGGTTTCCACAGTTCAACTTAGCTGCTTCTAGCTTCTGTTTCAGCTCAGACA
____________________________________________________________
consensus TGGAGACATGGTTTCCACAGTTCAACTTAGCTGCTTCTAGCTTCTGTTTCAGCTCAGACA
. : . : . : . : . : . :
rJMSF033E13+ GTGAAGTGTGGTTTTCCTGGTTGAAGCATTGAGCTGTTTTGCTAGCCTC-TTTTTTCGTG
rJMSF026N19+ GTGAAGTGTGGTTTTCCTGGTTGAAGCATTGAGCTGTTTTGCTAGCCTC-TTTTTTCGTG
rJMSF022J04+ GTGAAGTGTGGTTTTCCTGGTTGAAGCATTGAGCTGTTTTGCTAGCCTCTTTTTTTCGTG
rJMSF039L13+ GTGAAGTGTGGTTTTCCTGGTTGAAGCATTGAGCTGTTTTGCTAGCCTC-TTTTTTCGTG
____________________________________________________________
consensus GTGAAGTGTGGTTTTCCTGGTTGAAGCATTGAGCTGTTTTGCTAGCCTC-TTTTTTCGTG
. : . : . : . : . : . :
rJMSF033E13+ AATAACCTGATATTTTCACCAATACAGATCAAGGCTTTCTTTGTCCATGCTAAAGTGCTC
rJMSF026N19+ AATAACCTGATATTTTCACCAATACAGATCAAGGCTTTCTTTGTCCATGCTAAAGTGCTC
rJMSF022J04+ AATAACCTGATATTTTCACCAATACAGATCAAGGCTTTCTTTGTCCATGCTAAAGTGCTC
rJMSF039L13+ AATAACCTGATATTTTCACCAATACAGATCAAGGCTTTCTTTGTCCATGCTAAAGTGCTC
____________________________________________________________
consensus AATAACCTGATATTTTCACCAATACAGATCAAGGCTTTCTTTGTCCATGCTAAAGTGCTC
. : . : . : . : . : . :
rJMSF033E13+ AAGTCCTGAATGACAAAAATCGACAAGGCAAGTGCTTGAAGAAGAAAGGACCATATTTTG
rJMSF026N19+ AAGTCCTGAATGACAAAAATCGACAAGGCAAGTGCTTGAAGAAGAAAGGACCATATTTTG
rJMSF022J04+ AAGTCCTGAATGACAAAAATCGACAAGGCAAGTGCTTGAAGAAGAAAGGACCATATTTTG
rJMSF039L13+ AAGTCCTGAATGACAAAAATCGACAAGGCAAGTGCTTGAAGAAGAAAGGACCATATTTTG
____________________________________________________________
consensus AAGTCCTGAATGACAAAAATCGACAAGGCAAGTGCTTGAAGAAGAAAGGACCATATTTTG
. : . : . : . : . : . :
rJMSF033E13+ TAAACTTGTTGATACATGCTGAAAACATTATATTTTTAAATTAAAAATTAGAATACTAGA
rJMSF026N19+ TAAACTTGTTGATACATGCTGAAAACATTATATTTTTAAATTAAAAATTAGAATACTAGA
rJMSF022J04+ TAAACTTGTTGATACATGCTGAAAACATTATATTTTTAAATTAAAAATTAGAATACT
rJMSF039L13+ TAAACTTGTTGATACATGCTGAAAACATTATATTTTTAAATTAAAAATTAGAATACTAGA
____________________________________________________________
consensus TAAACTTGTTGATACATGCTGAAAACATTATATTTTTAAATTAAAAATTAGAATACTAGA
. : . : . : . : . : . :
rJMSF033E13+ CATCAAGGGAGCAGCAGCAGAGAATTGATAAAGATGT
rJMSF026N19+ CATCAAGGGAGCAGCAGCAGAGAATTGATAAAGATGT
rJMSF039L13+ CATCAAGGGAGCAGCAGCAGAGAATTGATAAAGATGTTTACTTTGATTGAATATCATAGT
____________________________________________________________
consensus CATCAAGGGAGCAGCAGCAGAGAATTGATAAAGATGTTTACTTTGATTGAATATCATAGT