| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF039G15 | Sequence | 687 | 000906 (4) | ref|XP_009596001.1| | 8e-68 | PREDICTED: uncharacterized protein At4g06598-like [Nicotiana tomentosiformis] r | 803 | 007190 (4) | ref|XP_003629951.1| | 2e-52 | Transcription factor bZIP63 [Medicago truncatula] gb|AET04427.1| bZIP transcript |
| JMSF040L14 | Sequence | 590 | 000906 (4) | ref|XP_010314642.1| | 2e-25 | PREDICTED: uncharacterized protein At4g06598 [Solanum lycopersicum] | 887 | 007190 (4) | ref|XP_003629952.1| | 9e-69 | Transcription factor bZIP63 [Medicago truncatula] |
| JMSF043P22 | Sequence | 738 | 000906 (4) | ref|XP_009596001.1| | 2e-67 | PREDICTED: uncharacterized protein At4g06598-like [Nicotiana tomentosiformis] r | 733 | 007190 (4) | ref|XP_011087712.1| | 2e-64 | PREDICTED: uncharacterized protein At4g06598-like [Sesamum indicum] ref|XP_01108 |
| JMSF050N05 | Sequence | 681 | 000906 (4) | ref|XP_009596001.1| | 7e-62 | PREDICTED: uncharacterized protein At4g06598-like [Nicotiana tomentosiformis] r | 761 | 007190 (4) | ref|XP_011092330.1| | 1e-68 | PREDICTED: uncharacterized protein At4g06598-like [Sesamum indicum] ref|XP_01109 |
This contig is upended
. : . : . : . : . : . :
rJMSF040L14+ AAAATTTTGTTGTTCAATGTCCCCTGCAAGAAGCTGACAGGGCCCCGTC
____________________________________________________________
consensus AAAATTTTGTTGTTCAATGTCCCCTGCAAGAAGCTGACAGGGCCCCGTC
. : . : . : . : . : . :
rJMSF040L14+ CCCAACAATTGAGAAGCAGGATCAAGTTGAATCTGGCCTGCTCGATTCAAAAAGCTCTGC
rJMSF039G15+ GCCTGCTCGATTCAAAAAGCTCTGC
____________________________________________________________
consensus CCCAACAATTGAGAAGCAGGATCAAGTTGAATCTGGCCTGCTCGATTCAAAAAGCTCTGC
. : . : . : . : . : . :
rJMSF050N05+ AAAAAAGGATTCTCCTCATGCCAAAAATTCTTCCTCGGAAACAGATACAAAACGTGC
rJMSF043P22+ GAAACAGATACAAAACGTGC
rJMSF040L14+ -GAAAAAAAGGATTCTCCTCATGCCAAAAATTCTTCCTCGGAAACAGATACAAAACGTGC
rJMSF039G15+ GGAAAAAAAGGATTCTCCTCATGCCAAAAATTCTTCCTCGGAAACAGATACAAAACGTGC
____________________________________________________________
consensus GGAAAAAAAGGATTCTCCTCATGCCAAAAATTCTTCCTCGGAAACAGATACAAAACGTGC
. : . : . : . : . : . :
rJMSF050N05+ AAAGCAGCAATTTGCTCAACGTTCACGAGTTCGGAAGCTTCAATACATAGCTGAGCTGGA
rJMSF043P22+ AAAGCAGCAATTTGCTCAACGTTCACGAGTTCGGAAGCTTCAATACATAGCTGAGCTGGA
rJMSF040L14+ AAAGCAGCAATTTGCTCAACGTTCACGAGTTCGGAAGCTTCAATACATAGCTGAGCTGGA
rJMSF039G15+ AAAGCAGCAATTTGCTCAACGTTCACGAGTTCGGAAGCTTCAATACATAGCTGAGCTGG-
____________________________________________________________
consensus AAAGCAGCAATTTGCTCAACGTTCACGAGTTCGGAAGCTTCAATACATAGCTGAGCTGGA
. : . : . : . : . : . :
rJMSF050N05+ AAGAAATGTCCAAGCTCTACAGGCTGAAGGTTCTGAAGTTTCTGCTGAGCTCGAATTCCT
rJMSF043P22+ AAGAAATGTCCAAGCTCTACAGGCTGAAGGTTCTGAAGTTTCTGCTGAGCTCGAATTCCT
rJMSF040L14+ AAGAAATGTCCAAGCTCTACAGGCTGAAGGTTCTGAAGTTTCTGCTGAGCTCGAATTCCT
rJMSF039G15+ -ATAAATGTCCAAGCTCTACAGGCTGAAGGTTCTGAAGTTTCTGCTGAGCTCGAATTCCT
____________________________________________________________
consensus AAGAAATGTCCAAGCTCTACAGGCTGAAGGTTCTGAAGTTTCTGCTGAGCTCGAATTCCT
. : . : . : . : . : . :
rJMSF050N05+ TAACCAGCAAAATCTTATTTTAAACATGGAGAATAAAGCTCTAAAGCAGCGTCTAGAAAG
rJMSF043P22+ TAACCAGCAAAATCTTATTTTAAACATGGAGAATAAAGCTCTAAAGCAGCGTCTAGAAAG
rJMSF040L14+ TAACCAGCAAAATCTTATTTTAAACATGGAGAATAAAGCTCTAAAGCAGCGTCTAGAAAG
rJMSF039G15+ TAACCAGCAAAATCTTATTTTAAACATGGAGAATAAAGCTCTAAAGCAGCGTCTAGAAAG
____________________________________________________________
consensus TAACCAGCAAAATCTTATTTTAAACATGGAGAATAAAGCTCTAAAGCAGCGTCTAGAAAG
. : . : . : . : . : . :
rJMSF050N05+ TTTAGCTCAAGAACAGCTAATAAAGTATTTTGAGCAAGAAGTATTAGAGCGAGAAAGAGG
rJMSF043P22+ TTTAGCTCAAGAACAGCTAATAAAGTATTTTGAGCAAGAAGTATTAGAGCGAGAAAGAGG
rJMSF040L14+ TTTAGCTCAAGAACAGCTAATAAAGTATTTTGAGCAAGAAGTATTAGAGCGAGAAAGAGG
rJMSF039G15+ TTTAGCTCAAGAACAGCTAATAAAGTATTTTGAGCAAGAAGTATTAGAGCGAGAAAGAGG
____________________________________________________________
consensus TTTAGCTCAAGAACAGCTAATAAAGTATTTTGAGCAAGAAGTATTAGAGCGAGAAAGAGG
. : . : . : . : . : . :
rJMSF050N05+ GCGACTTCGGGCCTTGTACCAGCAGCAGAAAACACAAGCAAATCAACAACCGCCATCTTC
rJMSF043P22+ GCGACTTCGGGCCTTGTACCAGCAGCAGAAAACACAAGCAAATCAACAACCGCCATCTTC
rJMSF040L14+ GCGACTTCGGGCCTTGTACCAGCAGCAGAAAACACAAGCAAATCAACAACCGCCATCTTC
rJMSF039G15+ GCGACTTCGGGCCTTGTACCAGCAGCAGAAAACACAAGCAAATCAACAACCGCCATCTTC
____________________________________________________________
consensus GCGACTTCGGGCCTTGTACCAGCAGCAGAAAACACAAGCAAATCAACAACCGCCATCTTC
. : . : . : . : . : . :
rJMSF050N05+ TGGGCATCGACGCGCCAAAAGTAGAGATCTCGACCAACAATTTGCAAACCTGTCGTTGAA
rJMSF043P22+ TGGGCATCGACGCGCCAAAAGTAGAGATCTCGACCAACAATTTGCAAACCTGTCGTTGAA
rJMSF040L14+ TGGGCATCGACGCGCCAAAAGTAGAGATCTCGACCAACAATTTGCAAACCTGTCGTTGAA
rJMSF039G15+ TGGGCATCGACGCGCCAAAAGTAGAGATCTCGACCAACAATTTGCAAACCTGTCGTTGAA
____________________________________________________________
consensus TGGGCATCGACGCGCCAAAAGTAGAGATCTCGACCAACAATTTGCAAACCTGTCGTTGAA
. : . : . : . : . : . :
rJMSF050N05+ AAACAAGGAAGCTGGCTCTGACCACGAACCCATCTCGGGCCAACTGCAAATTTGACCATT
rJMSF043P22+ AAACAAGGAAGCTGGCTCTGACCACGAACCCATCTCGGGCCAACTGCAAATTTGACCATT
rJMSF040L14+ AAACAAGGAAGCTGGCTCTGACCACGAACCCATCTCGGGCCAACTGCAAATTTGACCATT
rJMSF039G15+ AAACAAGGAAGCTGGCTCTGACCACGAACCCATCTCGGGCCAACTGCAAATTTGACCATT
____________________________________________________________
consensus AAACAAGGAAGCTGGCTCTGACCACGAACCCATCTCGGGCCAACTGCAAATTTGACCATT
. : . : . : . : . : . :
rJMSF050N05+ CTTTAGCTAGAACCTCCATAACATCCTCTGACCGTTCCTCATTGCGTGCGATATGATTAG
rJMSF043P22+ CTTTAGCTAGAACCTCCATAACATCCTCTGACCGTTCCTCATTGCGTGCGATATGATTAG
rJMSF040L14+ CTTTAGCTAGAACCTCCATAACATCCTCTGACCGTTCCTCATTGCGTGCGATATGATTAG
rJMSF039G15+ CTTTAGCTAGAACCTCCATAACATCCTCTGACCGTTCCTCATTGCGTGCGATATGATTAG
____________________________________________________________
consensus CTTTAGCTAGAACCTCCATAACATCCTCTGACCGTTCCTCATTGCGTGCGATATGATTAG
. : . : . : . : . : . :
rJMSF050N05+ CTCCCCAAATCCTGTGCTTCTCAGACTGCTTTGCCTTTGCTACTAGCTTCACATAGAAAC
rJMSF043P22+ CTCCCCAAATCCTGTGCTTCTCAGACTGCTTTGCCTTTGCTACTAGCTTCACATAGAAAC
rJMSF040L14+ CTCCCCAAATCCTGTGCTTCTCAGACTGCTTTGCCTTTGCTACTAGCTTCACATAGAAAC
rJMSF039G15+ CTCCCCAAATCCTGTGCTTCTCAGACTGCTTTGCCTTTGCTACTAGCTTCACATAGAAAC
____________________________________________________________
consensus CTCCCCAAATCCTGTGCTTCTCAGACTGCTTTGCCTTTGCTACTAGCTTCACATAGAAAC
. : . : . : . : . : . :
rJMSF050N05+ TCTAATTTCGGTTGTTGTTGTATCGTTTAAAACCTTTTTCTTTGTCAACGATGCTAGTAA
rJMSF043P22+ TCTAATTTCGGTTGTTGTTGTATCGTTTAAAACCTTTTTCTTTGTCAACGATGCTAGTAA
rJMSF040L14+ TCTAATTTCGGTTGTTGTTGTATCGTTTAAAACCTTTTTCTTTGTCAACGATGCTAGTAA
rJMSF039G15+ TCTAATTTCGGTTGTTGTTGTATCGTTTAAAACCTTTTTCTTTGTCAACGATGCTAGTAA
____________________________________________________________
consensus TCTAATTTCGGTTGTTGTTGTATCGTTTAAAACCTTTTTCTTTGTCAACGATGCTAGTAA
. : . : . : . : . : . :
rJMSF050N05+ TCTTTTTTCATGTGCACCTGGCAGTTGCTTGCCTGAGGTGATTGGTTTCAAGCATGATTC
rJMSF043P22+ TCTTTTTTCATGTGCACCTGGCAGTTGCTTGCCTGAGGTGATTGGTTTCAAGCATGATTC
rJMSF040L14+ TCTTTTTTCATGTGCACCTGGCAGTTGCTTGCCTGAGGTGATTGGTTTCAAGCATGATTC
rJMSF039G15+ TCTTTTTTCATGTGCACCTGGCAGTTGCTTGCCTGAGGTGATTGGTTTCAAGCATGATTC
____________________________________________________________
consensus TCTTTTTTCATGTGCACCTGGCAGTTGCTTGCCTGAGGTGATTGGTTTCAAGCATGATTC
. : . : . : . : . : . :
rJMSF050N05+ TTCCTTCCACTTTGTGTATGTTC
rJMSF043P22+ TTCCTTCCACTTTGTGTATGTTC
rJMSF040L14+ TTCCTTCCACTTTGTGTATGTTC
rJMSF039G15+ TTCCTTCCACTTTGTGTATGTTCAAGCTGTGATTAAAAACCCTTGTGTACTTCTGCTTAT
____________________________________________________________
consensus TTCCTTCCACTTTGTGTATGTTCAAGCTGTGATTAAAAACCCTTGTGTACTTCTGCTTAT