Contig 007188:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038H01+                                   CGAAGAAGAAAGCTCGGCCCCCCAGATCTGAGCTC
                      ____________________________________________________________
consensus                                      CGAAGAAGAAAGCTCGGCCCCCCAGATCTGAGCTC
 
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rJMSF038E21+          TCAAGAGGATGGGCTCGAGTGGCTCCCTCTTCTAGCTGCGGTTTCCGTGTATAATTCTCC
rJMSF038H01+          TCAAGAGGATGGGCTCGAGTGGCTCCCTCTTCTAGCTGCGGTTTCCGTGTATAATTCTCC
                      ____________________________________________________________
consensus             TCAAGAGGATGGGCTCGAGTGGCTCCCTCTTCTAGCTGCGGTTTCCGTGTATAATTCTCC
 
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rJMSF038E21+          CAGAAGGATGAACTCGAAGAAATCTTCAATCTGCACAGTGGGGCAGCACTCCATTCCTTA
rJMSF038H01+          CAGAAGGATGAACTCGAAGAAATCTTCAATCTGCACAGTGGGGCAGCACTCCATTCCTTA
                      ____________________________________________________________
consensus             CAGAAGGATGAACTCGAAGAAATCTTCAATCTGCACAGTGGGGCAGCACTCCATTCCTTA
 
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rJMSF038E21+          ACTTTCCTCTTCCGCACTTCTATTCGGTCAAATGGGAGGATGTAGAAATAAAAAATCCCA
rJMSF038H01+          ACTTTCCTCTTCCGCACTTCTATTCGGTCAAATGGGAGGATGTAGAAATAAAAAATCCCA
                      ____________________________________________________________
consensus             ACTTTCCTCTTCCGCACTTCTATTCGGTCAAATGGGAGGATGTAGAAATAAAAAATCCCA
 
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rJMSF038E21+          GTGAGAAGTGCCCAAAAATTTCTCTCTTGCTCAACAAAAAATTGCACAAAAGTTCTACTC
rJMSF038H01+          GTGAGAAGTGCCCAAAAATTTCTCTCTTGCTCAACAAAAAATTGCACAAAAGTTCTACTC
                      ____________________________________________________________
consensus             GTGAGAAGTGCCCAAAAATTTCTCTCTTGCTCAACAAAAAATTGCACAAAAGTTCTACTC
 
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rJMSF038E21+          TTTCCAGTTTAGTTCAGGTTGTTTTCCTGAAATCTTGAAGACACGGGGGATTTAATATAT
rJMSF038H01+          TTTCCAGTTTAGTTCAGGTTGTTTTCCTGAAATCTTGAAGACACGGGGGATTTAATATAT
                      ____________________________________________________________
consensus             TTTCCAGTTTAGTTCAGGTTGTTTTCCTGAAATCTTGAAGACACGGGGGATTTAATATAT
 
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rJMSF038E21+          TGACAGAGGAAGGAGAAGCAATTTCTGTCGCCAGTGGGCAGCAAGGATGCTATAAGATTC
rJMSF038H01+          TGACAGAGGAAGGAGAAGCAATTTCTGTCGCCAGTGGGCAGCAAGGATGCTATAAGATTC
                      ____________________________________________________________
consensus             TGACAGAGGAAGGAGAAGCAATTTCTGTCGCCAGTGGGCAGCAAGGATGCTATAAGATTC
 
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rJMSF038E21+          CCTAAAGAAAATGGAAATAGCAAGGAAAAAGGTGTTATACTTGAAAAACTCAAGCACTCA
rJMSF038H01+          CCTAAAGAAAATGGAAATAGCAAGGAAAAGGGTGTTATACTTGAAAAACTCAAGCACTCA
                      ____________________________________________________________
consensus             CCTAAAGAAAATGGAAATAGCAAGGAAAAGGGTGTTATACTTGAAAAACTCAAGCACTCA
 
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rJMSF038E21+          AAGAGTCAAAGGGGGAAGAACATGGCGATAGAGGTAGTGGTTGTGATGAAAAGCTGTGAT
rJMSF038H01+          AAGAGTCAAAGGGGGAAGAACATGGCGATAGAGGTAGTGGTTGTGATGAAAAGCTGTGAT
                      ____________________________________________________________
consensus             AAGAGTCAAAGGGGGAAGAACATGGCGATAGAGGTAGTGGTTGTGATGAAAAGCTGTGAT
 
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rJMSF038E21+          TTCTAGCATAGAAGAGAAGAAATGTGTTTGAAGGTGTCAAGTCCATCACCCCAAGGGCAA
rJMSF038H01+          TTCTAGCATAGAAGAGAAGAAATGTGTTTGAAGGTGTCAAGTCCATCACCCCAAGGGCAA
                      ____________________________________________________________
consensus             TTCTAGCATAGAAGAGAAGAAATGTGTTTGAAGGTGTCAAGTCCATCACCCCAAGGGCAA
 
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rJMSF038E21+          ACTATATTAAGAGAACCCTAGCTGGAGAATATCTCACATCTGCCTTAAATGATTTTGGTC
rJMSF038H01+          ACTATATTAAGAGAACCCTAGCTGGAGAATATCTCACATCTGCCTTAAATGATTTTGGTC
                      ____________________________________________________________
consensus             ACTATATTAAGAGAACCCTAGCTGGAGAATATCTCACATCTGCCTTAAATGATTTTGGTC
 
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rJMSF038E21+          CTGAACAATATGACAGCCTTGCTGGCTGCTGCTATATCTGATGGAGCAAACAAGCTTTTA
rJMSF038H01+          CTGAACAATATGACAGCCTTGCTGGCTGCTGCTATATCTGATGGAGCAAACAAGCTTTTA
                      ____________________________________________________________
consensus             CTGAACAATATGACAGCCTTGCTGGCTGCTGCTATATCTGATGGAGCAAACAAGCTTTTA
 
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rJMSF038E21+          ATGTTGGTATGGTTATTTTACTCTATCATATACTCATTTAGTAATTTTGACTAAAGTATG
rJMSF038H01+          ATGTTGGTATGGTTATTTTACTCTATCATATACTCATTTAGTAATTTTGACTAAAGTATG
                      ____________________________________________________________
consensus             ATGTTGGTATGGTTATTTTACTCTATCATATACTCATTTAGTAATTTTGACTAAAGTATG
 
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rJMSF038E21+          TGTTCCAACTCCAATTAAAGTTTAAGCTATTTGTAAGAATACACATGTCACAGCATTATC
rJMSF038H01+          TGTTCCAACTCCAATTAAAGTTTAAGCTATTTGTAAGAATACACATGTCACAGCATTATC
                      ____________________________________________________________
consensus             TGTTCCAACTCCAATTAAAGTTTAAGCTATTTGTAAGAATACACATGTCACAGCATTATC
 
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rJMSF038E21+          TTGTTTAGAGTAAGTAATCTTTAATTGTAGTTTTAGATCAAGAATGAAGTGTTCCATTCT
rJMSF038H01+          TTGTTTAGAGTAAGTAATCTTTAATTGTAGTTTTAGATCAAGAATGAAGTGTTCCATTCT
                      ____________________________________________________________
consensus             TTGTTTAGAGTAAGTAATCTTTAATTGTAGTTTTAGATCAAGAATGAAGTGTTCCATTCT