| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP004H01 | Sequence | 609 | 007187 (9) | ref|XP_006346696.1| | 3e-111 | PREDICTED: methylthioribose-1-phosphate isomerase-like [Solanum tuberosum] | |||||
| JMCP005D04 | Sequence | 613 | 007187 (9) | ref|XP_009627128.1| | 1e-111 | PREDICTED: methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_031 | |||||
| JMCP006D12 | Sequence | 609 | 007187 (9) | ref|XP_009627128.1| | 1e-111 | PREDICTED: methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_031 | |||||
| JMFS048H07 | Sequence | 220 | 007187 (9) | ref|XP_010412762.1| | 1e-24 | PREDICTED: methylthioribose-1-phosphate isomerase-like [Camelina sativa] | |||||
| JMSF028B07 | Sequence | 646 | 007187 (9) | ref|XP_010666847.1| | 3e-45 | PREDICTED: methylthioribose-1-phosphate isomerase [Beta vulgaris subsp. vulgari | 780 | 007187 (9) | ref|XP_006346696.1| | 2e-76 | PREDICTED: methylthioribose-1-phosphate isomerase-like [Solanum tuberosum] |
| JMSF038A02 | Sequence | 699 | 007187 (9) | ref|XP_010666847.1| | 2e-90 | PREDICTED: methylthioribose-1-phosphate isomerase [Beta vulgaris subsp. vulgari | 886 | 007187 (9) | ref|XP_006346696.1| | 6e-93 | PREDICTED: methylthioribose-1-phosphate isomerase-like [Solanum tuberosum] |
| JMSF041O18 | Sequence | 163 | 007187 (9) | ref|XP_010666847.1| | 2e-15 | PREDICTED: methylthioribose-1-phosphate isomerase [Beta vulgaris subsp. vulgari | |||||
This contig is upended
. : . : . : . : . : . :
JMSF028B07- GATGCAGTTTCCCGGTCGCACAAACGTCGT
____________________________________________________________
consensus GATGCAGTTTCCCGGTCGCACAAACGTCGT
. : . : . : . : . : . :
JMSF028B07- TCCCTTCTTCGCACGACCTCCGCAGCAGAACTAGCTTCGCAACTCTGCCTCCGCCGCCAA
____________________________________________________________
consensus TCCCTTCTTCGCACGACCTCCGCAGCAGAACTAGCTTCGCAACTCTGCCTCCGCCGCCAA
. : . : . : . : . : . :
JMSF028B07- GAAACGACCCTCTGCTGCCGGTTCTCCCACCTCCGCCTCCTCGCTACCAGCTGTCGCACC
____________________________________________________________
consensus GAAACGACCCTCTGCTGCCGGTTCTCCCACCTCCGCCTCCTCGCTACCAGCTGTCGCACC
. : . : . : . : . : . :
JMSF028B07- ACCCCTGCCGCCGTCCCTCTTCCCGACCGATCTGCTGCCGTCTCCTCTTTCGGACTCGCA
____________________________________________________________
consensus ACCCCTGCCGCCGTCCCTCTTCCCGACCGATCTGCTGCCGTCTCCTCTTTCGGACTCGCA
. : . : . : . : . : . :
JMSF028B07- CCAAACCCTAATCCTTAATTATCTACAGTTGATTTTGAAGTGACTAATGGCGAACGGAGC
____________________________________________________________
consensus CCAAACCCTAATCCTTAATTATCTACAGTTGATTTTGAAGTGACTAATGGCGAACGGAGC
. : . : . : . : . : . :
JMSF028B07- TCATTCTGAAGATAAAACTCTACAAGCCATCTGCTACAAACGCGGCTCTCTTCAGCTCCT
____________________________________________________________
consensus TCATTCTGAAGATAAAACTCTACAAGCCATCTGCTACAAACGCGGCTCTCTTCAGCTCCT
. : . : . : . : . : . :
JMSF028B07- TGATCAGAGGAAGCTTCCATTACAGACGATTTATTTGGATATAAAAAATGCAAAAGACGG
____________________________________________________________
consensus TGATCAGAGGAAGCTTCCATTACAGACGATTTATTTGGATATAAAAAATGCAAAAGACGG
. : . : . : . : . : . :
JMSF028B07- ATGGGATGCAATAAAAGAAATGGTAGTCCGCGGGGCACCTGCAATTGCGATAGCTGCTGC
JMSF038A02- GGGATGCAATAAAAGAAATGGTAGTCCGCGGGGCACCTGCAATTGCGATAGCTGCTGC
____________________________________________________________
consensus ATGGGATGCAATAAAAGAAATGGTAGTCCGCGGGGCACCTGCAATTGCGATAGCTGCTGC
. : . : . : . : . : . :
JMSF028B07- ACTCTCTTTGGCTGTAGAAGCGTCTAACTTAGAGACCTTTAATGGGACAGCTCAAGATGC
JMSF038A02- ACTCTCTTTGGCTGTAGAAGCGTCTAACTTAGAGACCTTTAATGGGACAGCTCAAGATGC
____________________________________________________________
consensus ACTCTCTTTGGCTGTAGAAGCGTCTAACTTAGAGACCTTTAATGGGACAGCTCAAGATGC
. : . : . : . : . : . :
JMSF028B07- GGTATCTTTCCTTAGCCAGAAATTAGAATATCTTGTCTCAAGCCGGCCTACAGCTGTCAA
JMSF038A02- GGTATCTTTCCTTAGCCAGAAATTAGAATATCTTGTCTCAAGCCGGCCTACAGCTGTCAA
____________________________________________________________
consensus GGTATCTTTCCTTAGCCAGAAATTAGAATATCTTGTCTCAAGCCGGCCTACAGCTGTCAA
. : . : . : . : . : . :
JMSF028B07- TCTTTCAGATGCTGCTACAAAGCTTAACGAAGTTATTACGAAGGAAGCTTCCACTGCTTC
rJMSF041O18- TCAGATGCTGCTACAAANCTGAACGAAGTTATTACGAAGGAAGCTTCCACTGCTTC
JMSF038A02- TCTTTCAGATGCTGCTACAAAGCTTAACGAAGTTATTACGAAGGAAGCTTCCACTGCTTC
____________________________________________________________
consensus TCTTTCAGATGCTGCTACAAAGCTTAACGAAGTTATTACGAAGGAAGCTTCCACTGCTTC
. : . : . : . : . : . :
JMSF028B07- AGAAGCCAAGACTATT
rJMSF041O18- NGAAGCCAAGACTATTTTTGAGGCTTATATTATGGCAGCTGAAATNATGCTCGAGGATGA
JMSF038A02- AGAAGCCAAGACTATTTTTGAGGCTTATATTATGGCAGCTGAAATTATGCTCGAGGATGA
rJMCP006D12+ GGCAGCTGAAATTATGCTCGAGGATGA
rJMCP004H01+ GGCAGCTGAAATTATGCTCGAGGATGA
JMCP005D04+ TTATGGCAGCTGAAATTATGCTCGAGGATGA
____________________________________________________________
consensus AGAAGCCAAGACTATTTTTGAGGCTTATATTATGGCAGCTGAAATTATGCTCGAGGATGA
. : . : . : . : . : . :
rJMSF041O18- TGTTGCTTCCAATAAAGCAATTGGGTCGCACGGAGCTTCTCNTCTCC
JMSF038A02- TGTTGCTTCCAATAAAGCAATTGGGTCGCACGGAGCTTCTCTTCTCCAAAATCAGCTGGT
rJMCP006D12+ TGTTGCTTCCAATAAAGCAATTGGGTCGCACGGAGCTTCTCTTCTCCAAAATCAGCTGGT
rJMCP004H01+ TGTTGCTTCCAATAAAGCAATTGGGTCGCACGGAGCTTCTCTTCTCCAAAATCAGCTGGT
JMCP005D04+ TGTTGCTTCCAATAAAGCAATTGGGTCGCACGGAGCTTCTCTTCTCCAAAATCAGCTGGT
____________________________________________________________
consensus TGTTGCTTCCAATAAAGCAATTGGGTCGCACGGAGCTTCTCTTCTCCAAAATCAGCTGGT
. : . : . : . : . : . :
JMSF038A02- GGGCTCCAAGAAGATATCGATATTAACCCATTGCAACACTGGCAGCCTGGCAACGGCTGG
rJMCP006D12+ GGGCTCCAAGAAGATATCGATATTAACCCATTGCAACACTGGCAGCCTGGCAACGGCTGG
rJMCP004H01+ GGGCTCCAAGGAGATATCGATATTAACCCATTGCAACACTGGCAGCCTGGCAACGGCTGG
JMFS048H07+ TGGCAACGGCTGG
JMCP005D04+ GGGCTCCAAGAAGATATCGATATTAACCCATTGCAACACTGGCAGCCTGGCAACGGCTGG
____________________________________________________________
consensus GGGCTCCAAGAAGATATCGATATTAACCCATTGCAACACTGGCAGCCTGGCAACGGCTGG
. : . : . : . : . : . :
JMSF038A02- GTATGGAACTGCTCTTGGTGTGATTCGGGCTGTCAATACTGCAGGGTTTTTGGAAAAGGG
rJMCP006D12+ GTATGGAACTGCTCTTGGTGTGATTCGGGCTGTCAATACTGCAGGGTTTTTGG-AAAGGG
rJMCP004H01+ GTATGGAACTGCTCTTGGTGTGATTCGGGCTGTCAATACTGCAGGGTTTTTGG-AAAGGG
JMFS048H07+ GTATGGAACTGCTCTTGGTGTGATTCGGGCTGTCAATACTGCAGGGTTTTTGG-AAAGGG
JMCP005D04+ GTATGGAACTGCTCTTGGTGTGATTCGGGCTGTCAATACTGCAGGGTTTTTGG-AAAGGG
rJMSF038A02+ TTGGTGTGATTCGGGCTGTCAATACTGCAGGGTTTTTGGAAAAGGG
____________________________________________________________
consensus GTATGGAACTGCTCTTGGTGTGATTCGGGCTGTCAATACTGCAGGGTTTTTGG-AAAGGG
. : . : . : . : . : . :
JMSF038A02- CTTATTGCACTGAAACACGC
rJMCP006D12+ CTTATTGCACTGAAACACGCCCTTTCAACCAGGGATCCAGACTGACAGCATTTGAGTTGG
rJMCP004H01+ CTTATTGCACTGAAACACGCCCTTTCAACCAGGGATCCAGACTGACAGCATTTGAGTTGG
JMFS048H07+ CTTATTGCACTGAAACACGCCCTTTCAACCAGGGATCCAGACTGACAGCATTTGAGTTGG
JMCP005D04+ CTTATTGCACTGAAACACGCCCTTTCAACCAGGGATCCAGACTGACAGCATTTGAGTTGG
rJMSF028B07+ TTGAGTTGG
rJMSF038A02+ CTTATTGCACTGAAACACGCCCTTTCAACCAGGGATCCAGACTGACAGCATTTGAGTTGG
____________________________________________________________
consensus CTTATTGCACTGAAACACGCCCTTTCAACCAGGGATCCAGACTGACAGCATTTGAGTTGG
. : . : . : . : . : . :
rJMCP006D12+ TTACCGAGAACATTCCTGCCACCCTCATAGCAGATTCTGCTGCAGCCGCGTTGATGAAAG
rJMCP004H01+ TTACCGAGAACATTCCTGCCACCCTCATAGCAGATTCTGCTGCAGCCGCGTTGATGAAAG
JMFS048H07+ TTACCGAGAACATTCCTGCCACCCTCATAGCAG
JMCP005D04+ TTACCGAGAACATTCCTGCCACCCTCATAGCAGATagTGCTGCAGCCGCGTTGATGAAAG
rJMSF028B07+ TTACCGAGAACATTCCTGCCACCCTCATAGCAGATTCTGCTGCAGCCGCGTTGATGAAAG
rJMSF038A02+ TTACCGAGAACATTCCTGCCACCCTCATAGCAGATTCTGCTGCAGCCGCGTTGATGAAAG
____________________________________________________________
consensus TTACCGAGAACATTCCTGCCACCCTCATAGCAGATTCTGCTGCAGCCGCGTTGATGAAAG
. : . : . : . : . : . :
rJMCP006D12+ CTGGACGTGTGAATGCTGTCATTGTTGGAGCTGATCGCATAGCTGCAAATGGTGATACTG
rJMCP004H01+ CTGGACGTGTGAATGCTGTCATTGTTGGAGCTGATCGCATAGCTGCAAATGGTGATACTG
JMCP005D04+ CTGGACGTGTGAATGCTGTCATTGTTGGAGCTGATCGCATAGCTGCAAATGGTGATACTG
rJMSF028B07+ CTGGACGTGTGAATGCTGTCATTGTTGGAGCTGATCGCATAGCTGCAAATGGTGATACTG
rJMSF038A02+ CTGGACGTGTGAATGCTGTCATTGTTGGAGCTGATCGCATAGCTGCAAATGGTGATACTG
____________________________________________________________
consensus CTGGACGTGTGAATGCTGTCATTGTTGGAGCTGATCGCATAGCTGCAAATGGTGATACTG
. : . : . : . : . : . :
rJMCP006D12+ CCAACAAGATCGGGACTTACAGCCTTGCTGTTTGTGCTATGCATCATGGTGTACCGTTTT
rJMCP004H01+ CCAACAAGATCGGGACTTACAGCCTTGCTGTTTGTGCTATGCATCATGGTGTACCGTTTT
JMCP005D04+ CCAACAAGATCGGGACTTACAGCCTTGCTGTTTGTGCTATGCATCATGGTGTACCGTTTT
rJMSF028B07+ CCAACAAGATCGGGACTTACAGCCTTGCTGTTTGTGCTATGCATCATGGTGTACCGTTTT
rJMSF038A02+ CCAACAAGATCGGGACTTACAGCCTTGCTGTTTGTGCTATGCATCATGGTGTACCGTTTT
____________________________________________________________
consensus CCAACAAGATCGGGACTTACAGCCTTGCTGTTTGTGCTATGCATCATGGTGTACCGTTTT
. : . : . : . : . : . :
rJMCP006D12+ ATGTGGCCGCTCCCCTAACTTCTGTTGATCTCTCCTTGTCTTCTGGACAACAAATTGTGA
rJMCP004H01+ ATGTGGCCGCTCCCCTAACTTCTGTTGATCTCTCCTTGTCTTCTGGACAACAAATTGTGA
JMCP005D04+ ATGTGGCCGCTCCCCTAACTTCTGTTGATCTCTCCTTGTCTTCTGGACAACAAATTGTGA
rJMSF028B07+ ATGTGGCCGCTCCCCTAACTTCTGTTGATCTCTCCTTGTCTTCTGGACAACAAATTGTGA
rJMSF038A02+ ATGTGGCCGCTCCCCTAACTTCTGTTGATCTCTCCTTGTCTTCTGGACAACAAATTGTGA
____________________________________________________________
consensus ATGTGGCCGCTCCCCTAACTTCTGTTGATCTCTCCTTGTCTTCTGGACAACAAATTGTGA
. : . : . : . : . : . :
rJMCP006D12+ TAGAAGAAAGATCTCCGAAAGAACTGTTGCATACGCATGGAGGACTGGGTGAACAAATCG
rJMCP004H01+ TAGAAGAAAGATCTCCGAAAGAACTGTTGCATACGCATGGAGGACTGGGTGAACAAATCG
JMCP005D04+ TAGAAGAAAGATCTCCGAAAGAACTGTTGCATACGCATGGAGGACTGGGTGAACAAATCG
rJMSF028B07+ TAGAAGAAAGATCTCCGAAAGAACTGTTGCATACGCATGGAGGACTGGGTGAACAAATCG
rJMSF038A02+ TAGAAGAAAGATCTCCGAAAGAACTGTTGCATACGCATGGAGGACTGGGTGAACAAATCG
____________________________________________________________
consensus TAGAAGAAAGATCTCCGAAAGAACTGTTGCATACGCATGGAGGACTGGGTGAACAAATCG
. : . : . : . : . : . :
rJMCP006D12+ CTGCTTCGGGTATTTCTGTTTGGAATCCAGCATTTGATGTTAC
rJMCP004H01+ CTGCTTCGGGTATTTCTGTTTGGAATCCAGCATTTGATGTTAC
JMCP005D04+ CTGCTTCGGGTATTTCTGTTTGGAATCCAGCATTTGATGTTAC
rJMSF028B07+ CTGCTTCGGGTATTTCTGTTTGGAATCCAGCATTTGATGTTACCCCGGCCAGTTTAATAA
rJMSF038A02+ CTGCTTCGGGTATTTCTGTTTGGAATCCAGCATTTGATGTTACCCCGGCCAGTTTAATAA
____________________________________________________________
consensus CTGCTTCGGGTATTTCTGTTTGGAATCCAGCATTTGATGTTACCCCGGCCAGTTTAATAA
. : . : . : . : . : . :
rJMSF028B07+ GTGGCATAATTACCGAAAAGGGCGTCATCTCAAAGGACGGGAATGATGCTTTTGATATTA
rJMSF038A02+ GTGGCATAATTACCGAAAAGGGCGTCATCTCAAAGGACGGGAATGATGCTTTTGATATTA
____________________________________________________________
consensus GTGGCATAATTACCGAAAAGGGCGTCATCTCAAAGGACGGGAATGATGCTTTTGATATTA
. : . : . : . : . : . :
rJMSF028B07+ CTGGTTTTGTACACAAGGTCTCGGGAAATGTATAATACACCTCTCCCTGACCGAGCTACC
rJMSF038A02+ CTGGTTTTGTACACAAGGTCTCGGGAAATGTATAATACACCTCTCCCTGACCGAGCTACC
____________________________________________________________
consensus CTGGTTTTGTACACAAGGTCTCGGGAAATGTATAATACACCTCTCCCTGACCGAGCTACC
. : . : . : . : . : . :
rJMSF028B07+ TACTCATACTGCGGTGAGGCAATCTTCGTTGGTAAATAAGGTTCCAGTTGTATTGCATTG
rJMSF038A02+ TACTCATACTGCGGTGAGGCAATCTTCGTTGGTAAATAAGGTTCCAGTTGTATTGCATTG
____________________________________________________________
consensus TACTCATACTGCGGTGAGGCAATCTTCGTTGGTAAATAAGGTTCCAGTTGTATTGCATTG
. : . : . : . : . : . :
rJMSF028B07+ AACGACTCGGTGTTGGATGCACTTGTTTAATTTGAATAAACCATCATCCATACAAGGTCA
rJMSF038A02+ AACGACTCGGTGTTGGATGCACTTGTTTAATTTGAATAAACCATCATCCATACAAGGTCA
____________________________________________________________
consensus AACGACTCGGTGTTGGATGCACTTGTTTAATTTGAATAAACCATCATCCATACAAGGTCA
. : . : . : . : . : . :
rJMSF028B07+ CTTGTGTTGTACTTGACATGTTTAAGTGATTCTTGAGGAATCTGGCTTTGTGAGCTACTT
rJMSF038A02+ CTTGTGTTGTACTTGACATGTTTAAGTGATTCTTGAGGAATCTGGCTTTGTGAGCTACTT
____________________________________________________________
consensus CTTGTGTTGTACTTGACATGTTTAAGTGATTCTTGAGGAATCTGGCTTTGTGAGCTACTT
. : . : . : . : . : . :
rJMSF028B07+ TGTGTTTCTTTATTGCTTTTTGAATTTAGATGTGTATCTGCCATTTATCAAATCTCATAT
rJMSF038A02+ TGTGTTTCTTTATTGCTTTTTGAATTTAGATGTGTATCTGCCATTTATCAAATCTCATAT
____________________________________________________________
consensus TGTGTTTCTTTATTGCTTTTTGAATTTAGATGTGTATCTGCCATTTATCAAATCTCATAT
. : . : . : . : . : . :
rJMSF028B07+ TCCTTTGGGTTTATTAATAGCAGAAAAGCTATG
rJMSF038A02+ TCCTTTGGGTTTATTAATAGCAGAAAAGCTATGTGCCCAAAAACTCTACTATCTGAATAC
____________________________________________________________
consensus TCCTTTGGGTTTATTAATAGCAGAAAAGCTATGTGCCCAAAAACTCTACTATCTGAATAC