Contig 007182:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS130G04Sequence641007182 (9)ref|XP_009595542.1|1e-42PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform
JMFS140E05Sequence641007182 (9)ref|XP_006355390.1|4e-50PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [So
JMSF006B15Sequence235007182 (9)380007182 (9)
JMSF006P17Sequence270014586211007182 (9)
JMSF007B06Sequence796007182 (9)ref|XP_009595542.1|5e-12PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform
JMSF027K18Sequence379009375 (2)477007182 (9)ref|XP_009595542.1|8e-14PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform
JMSF029P20Sequence715000811 (2)ref|XP_009769022.1|1e-106PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform 772007182 (9)ref|XP_009769022.1|2e-11PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform
JMSF037G06Sequence296009375 (2)746007182 (9)ref|XP_009769022.1|4e-11PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform

Alignment

This contig is upended


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JMFS140E05-                           GTGCTTTGGAAAAGGAAGAGGAAGACTATTTCAACGAGGATAGC
                      ____________________________________________________________
consensus                             GTGCTTTGGAAAAGGAAGAGGAAGACTATTTCAACGAGGATAGC
 
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JMFS140E05-           GATGAAGAAGATTCCACATCAGTATCTGTGTCAAATGCTAATAGAGTTCAATCTCGGGAT
JMFS130G04-                                                 TAATAGAGTTCAATCTCGGGAT
                      ____________________________________________________________
consensus             GATGAAGAAGATTCCACATCAGTATCTGTGTCAAATGCTAATAGAGTTCAATCTCGGGAT
 
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JMFS140E05-           TCTCGGCGAGTCGTGGCTAATGGTTCTGCTCCGAGCTATCCAGCAGTTAGGTCCGGGGGT
JMFS130G04-           TCTCGGCGAGTCGTGGCTAATGGTTCTGCTCCGAGCTATCCAGCAGTTAGGTCCGGGGGT
                      ____________________________________________________________
consensus             TCTCGGCGAGTCGTGGCTAATGGTTCTGCTCCGAGCTATCCAGCAGTTAGGTCCGGGGGT
 
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JMFS140E05-           CTTGTTGATTATGATGATGATGAGGATGACGAGGATTATAAACCACTACCTAAGAAACAG
JMFS130G04-           CTTGTTGATTATGATGATGATGAGGATGACGAGGATTATAAACCACCACCTAAGAAACAG
                      ____________________________________________________________
consensus             CTTGTTGATTATGATGATGATGAGGATGACGAGGATTATAAACCACTACCTAAGAAACAG
 
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JMFS140E05-           TTGGATACTTCTGATGAAGATGGAGTAGAGTCATTCCCCTTGAAACGCAAACTAACCCAA
JMFS130G04-           TTGGATACTTCTGATGAAGATGGAGTAGAGTCATTCCCCTTGAAACGCAAACTAACCCAA
                      ____________________________________________________________
consensus             TTGGATACTTCTGATGAAGATGGAGTAGAGTCATTCCCCTTGAAACGCAAACTAACCCAA
 
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JMFS140E05-           AAGGAAGAGCCTAATCCAAAAAGGTTGCAGCGGGCTGCTAAGACCTCCTCGAAGTCACGT
JMFS130G04-           AAGGAAGAGCCTAATCCAAAAAGGTTGCAGCGGGCTGCTAAGACCTCCTCGAAGTCACGT
                      ____________________________________________________________
consensus             AAGGAAGAGCCTAATCCAAAAAGGTTGCAGCGGGCTGCTAAGACCTCCTCGAAGTCACGT
 
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JMFS140E05-           AACAGTGTCTTTGCTGCCTTGTGCTCGACCTTGAGCCAAGCAGTTTTGCCGAGTAGCATA
JMFS130G04-           AACAGTGTCTTTGCTGCCTTGTGCTCGACCTTGAGCCAAGCAGTTTTGCCGAGTAGCATA
rJMSF027K18+                                            GCCAAGCAGTTTNGCCGAGTAGCATA
rJMSF029P20+                                                      TTTGNCGAGTAGCATA
rJMSF007B06+                                            GCCAAGCAGGTTTGCCGAGTAGCATA
                      ____________________________________________________________
consensus             AACAGTGTCTTTGCTGCCTTGTGCTCGACCTTGAGCCAAGCAGTTTTGCCGAGTAGCATA
 
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JMFS140E05-           TCAGCAAATATTGCTCATGACGACGATTCTTGCTCAGGAGACCCGAAGGATTCAACTGAA
JMFS130G04-           TCAGCAAATATTGCTCATGACGACGATTCTTGCTCAGGAGACCCGAAGGATTCAACTGAA
rJMSF027K18+          TCAGCAAATANTGCTCATGACGACGATTCTTGCTCAGGAGACCCGAAGGATTCAACTGAA
rJMSF029P20+          TCAGCAAATATTGCTCATGACGACGATTC-TGCTCAGGAGACCCGAAGGATTCAACTGAA
rJMSF007B06+          TCAGCAAATATTGCTCATGACGACGATTCTTGCTCAGGAGACCCGAAGGATTCAACTGAA
rJMSF037G06+                                           TCAGGAGACCCGAAGGATTCAACTGAA
                      ____________________________________________________________
consensus             TCAGCAAATATTGCTCATGACGACGATTCTTGCTCAGGAGACCCGAAGGATTCAACTGAA
 
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JMFS140E05-           GCTGGTCACGAGAAAGGTAGCTTTTCTGACAGCAACGGAAGCGTGGAAGCTGAAAACCAT
JMFS130G04-           GCTGGTCACGAGAAAGGTAGCTTTTCTGACAGCAACGGAAGCGTGGAAGCTGAAAACCAT
rJMSF027K18+          GCTGGTCACGAGAAAGGTAGCTTTTCTGACAGCAACGGAAGCGTGGAAGCTGAAAACCAT
rJMSF029P20+          GCTGGTCACGAGAAAGGTAGCTTTTCTGACAGCAACGGAAGCGTGGAAGCTGAAAACCAT
rJMSF007B06+          GCTGGTCACGAGAAAGGTAGCTTTTCTGACAGCAACGGAAGCGTGGAAGCTGAAAACCAT
rJMSF037G06+          GCTGGTCACGAGAAAGGTAGCTTTTCTGACAGCAACGGAAGCGTGGAAGCTGAAAACCAT
                      ____________________________________________________________
consensus             GCTGGTCACGAGAAAGGTAGCTTTTCTGACAGCAACGGAAGCGTGGAAGCTGAAAACCAT
 
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JMFS140E05-           GTTGACAAGGAAGAGATTTCTCCTAAAAACTTTGCGGAAGGCTTATCCAACTCTCCGGAT
JMFS130G04-           GTTGACAAGGAAGAGATTTCTCCTAAAAACTTTGCGGAAGGCTTATCCAACTCTCCGGAT
rJMSF027K18+          GTTGACAAGGAAGAGATTTCTCCTAAAAACTTTGCGGAAGGCTTATCCAACTCTCCGGAT
rJMSF029P20+          GTTGACAAGGAAGAGATTTCTCCTAAAAACTTTGCGGAAGGCTTATCCAACTCTCCGGAT
rJMSF007B06+          GTTGACAAGGAAGAGATTTCTCCTNAAAACTTTGCGGAAGGCTTATCCAACTCTCCGGAT
rJMSF037G06+          GTTGACAAGGAAGAGATTTCTCCTAAAAACTTTGCGGAAGGCTTATCCAACTCTCCGGAT
                      ____________________________________________________________
consensus             GTTGACAAGGAAGAGATTTCTCCTAAAAACTTTGCGGAAGGCTTATCCAACTCTCCGGAT
 
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JMFS140E05-           AATAGGCAGTGGGGAGATGACGGCCCATTGATACAACANAATTCATCTCCCGAAATG   
JMFS130G04-           AATAGGCAGTGGGGAGATGACGGCCCATTGATACAACAAAATTCATCTCCCGAAATGGCT
rJMSF027K18+          AATAGGCAGTGGGGAGATGACGGCCCATTGATACAACAAAATTCATCTCCCGAAATGGCT
rJMSF029P20+          AATAGGCAGTGGGGAGATGACGGCCCATTGATACAACAAAATTCATCTCCCGAAATGGCT
rJMSF007B06+          AATAGGCAGTGGGGAGATGACGGCCCATTGATACAACAAAATTCATCTCCCGAAATGGCT
rJMSF037G06+          AATAGGCAGTGGGGAGATGACGGCCCATTGATACAACAAAATTCATCTCCCGAAATGGCT
                      ____________________________________________________________
consensus             AATAGGCAGTGGGGAGATGACGGCCCATTGATACAACAAAATTCATCTCCCGAAATGGCT
 
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JMFS130G04-           GTAAACGGATCATGACCCGTGCCCAAGAACCACACACGCCTGCCTCCGGTGGACAATTTG
rJMSF027K18+          GTAAACGGATCATGACCCGTGCCCAAGAACCACACACGCCTGCCTCCGGTGGACAATTTG
JMSF006B15-                CGGATCATGACCCGTGCCCAAGAACCACACACGCCTGCCTCCGGTGGACAATTTG
rJMSF029P20+          GTAAACGGATCATGACCCGTGCCCAAGAACCACACACGCCTGCCTCCGGTGGACAATTTG
rJMSF007B06+          GTAAACGGATCNTGACCCGTGCCCAAGAACCACNCNCGCCTGCCTCCGGTGGACAATTTG
rJMSF037G06+          GTAAACGGATCATGACCCGTGCCCAAGAACCACACACGCCTGCCTCCGGTGGACAATTTG
                      ____________________________________________________________
consensus             GTAAACGGATCATGACCCGTGCCCAAGAACCACACACGCCTGCCTCCGGTGGACAATTTG
 
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JMFS130G04-           TTACTTTGAGCACATGGTT                                         
rJMSF027K18+          TTACTTTGAGCACATGGTTGCCCGCAAACCAGCAGTTGGTTGCAAAAGCGAAAAAGGGAA
JMSF006B15-           TTACTTTGAGCACATGGTTGCCCGCAAACCAGCAGTTGGTTGCAAAAGCGAAAAAGGGAA
rJMSF029P20+          TTACTTTGAGCACATGGTTGCCCGCAAACCAGCAGTTGGTTGCAAAAGCGAAAAAGGGAA
rJMSF007B06+          TTACTTTGAGCACATGGTTGCCCGCAAACCAGCAGTTGGTNGCAAAAGCGAAAAAGGGAA
rJMSF037G06+          TTACTTTGAGCACATGGTTGCCCGCAAACCAGCAGTTGGTTGCAAAAGCGAAAAAGGGAA
                      ____________________________________________________________
consensus             TTACTTTGAGCACATGGTTGCCCGCAAACCAGCAGTTGGTTGCAAAAGCGAAAAAGGGAA
 
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rJMSF027K18+          AAACTGCTGTGATGCATGCCGTCG                                    
JMSF006B15-           AAACTGCTGTGATGCATGCCGTCGTGTACTGAAAGAGGATGATATGATAATGTACAGTGC
rJMSF029P20+          AAACTGCTGTGATGCATGCCGTCGTGTACTGAAAGAGGATGATATGATAATGTACAGTGC
rJMSF007B06+          AAANTGCTGTGANGCANGCCGTCGTGTACTGAAAGAGGATGATATGATAATGTACAGTGC
rJMSF006B15+                                    TACTGAAAGAGGATGATATGATAATGTACAGTGC
rJMSF037G06+          AAACTGCTGTGATGCATGCCGTCGTGTACTGAAAGAGGATGATATGATAATGTACAGTGC
                      ____________________________________________________________
consensus             AAACTGCTGTGATGCATGCCGTCGTGTACTGAAAGAGGATGATATGATAATGTACAGTGC
 
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JMSF006B15-           CGTTGCAAGCATGGGGAGAGATCTCCATGACGCTTTAAGCTTGAGTAAAATTATTTACC 
rJMSF029P20+          CGTTGCAAGCATGGGGAGAGATCTCCATGACGCTTTAAGCTTGAGTAAAATTATTTACCC
rJMSF007B06+          CGTTGCAAGCATGGGGAGAGATCTCCATGACGCTTTAAGCTTGAGTAAAATTATTTACCC
rJMSF006B15+          CGTNGCAAGCATGGGGAGAGATCTCCAGGACGCTTTAAGCTGGAGTAAAATTATNTACCC
rJMSF037G06+          CGTTGCAAGCATGGGGAGAGATCTCCATGACGCTTTAAGCTTGAGTAAAATTATTTACCC
                      ____________________________________________________________
consensus             CGTTGCAAGCATGGGGAGAGATCTCCATGACGCTTTAAGCTTGAGTAAAATTATTTACCC
 
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rJMSF006P17+            GCGAAAAAACGTTCCGATAGCCATAGTTTTTGCGATTTTATNGAATCTCATATTTGCG
rJMSF029P20+          TTGCGAAAAAACGTTCCGATAGCCATAGTTTTTGCGATTTTATCGAATCTCATATTTGCG
rJMSF007B06+          NTGCGAAAAAACGNTCCGATAGCCATAGTTTTTGCGATTTTATCGAATCTCATATTTGCG
rJMSF006B15+          TTGCGAAAAAACGTTCCGATAGCCATAGTTTTTGCGATTTTATCGAATCTCATATTTGCG
rJMSF037G06+          TTGCGAAAAAACGTTCCGATAGCCATAGTTTTTGCGATTTTATCGAATCTCATATTTGCG
                      ____________________________________________________________
consensus             TTGCGAAAAAACGTTCCGATAGCCATAGTTTTTGCGATTTTATCGAATCTCATATTTGCG
 
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rJMSF006P17+          CTCTCCATTTTGCTTCCCTCANTTCAGTTTCNTCTTCTTCTTCTTCTATGTGAATCTCTT
rJMSF029P20+          CTCTCCATTTTGCTTCCCTCAGTTCAGTTTCTTCTTCTTCTTCTTCTATGTGAATCTCTT
rJMSF007B06+          CTNTCCATNTTGCTTCCCTCAGTTCAGTTTCTTCTTCTTCTTCTTCTATGTGAATCTCTT
rJMSF006B15+          CTCTCCATTTTGCTTCCCTCAGTTCAGTTTCTTCTTCTTCTTCTTCTATGTGAATCTCTT
rJMSF037G06+          CTCTCCATTTTGCTTCCCTCAGTTCAGTTTCTTCTTCTTCTTCTTCTATGTGAATCTCTT
                      ____________________________________________________________
consensus             CTCTCCATTTTGCTTCCCTCAGTTCAGTTTCTTCTTCTTCTTCTTCTATGTGAATCTCTT
 
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rJMSF006P17+          AAGTCA-CTGACTCTCTCTCGTCTTAGTTCNTANNGGNGGCAATATCTTCACCCTGCAAG
rJMSF029P20+          AAGTCA-CTGACTCTCTCTCGTCTTAGTTCTTATTGGTGGCAATATCTTCACCCTGCAAG
rJMSF007B06+          AAGTCATCTGACTCTCTCTCGTCTTAGTTCTTATCGGTGGCAATATCTTCACCCTGCNAG
rJMSF006B15+          AAGTCA-CTGACTCTCTCTCGTCTTAGTTCTTATTGGTGGCAATATCTTCACCCTGCAAG
rJMSF037G06+          AAGTCA-CTGACTCTCTCTCGTCTTAGTTCTTATTGGTGGCAATATCTTCACCCTGCAAG
                      ____________________________________________________________
consensus             AAGTCA-CTGACTCTCTCTCGTCTTAGTTCTTATTGGTGGCAATATCTTCACCCTGCAAG
 
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rJMSF006P17+          CNTTTGANNATATNGAAATGA                                       
rJMSF029P20+          CTTTTGATTATATTGAAATGAAATTTTGAAAATTGTGGGTGTAACACTAGGGGATGTCAG
rJMSF007B06+          CTTTTGATTATATTGAAATGAAATTTTGAAAATTGTGGGTGNAACACTAGGGGATGTCAG
rJMSF006B15+          CTTTTGATTATATTGAAATGAAATTTTGAAAATTGTGGGTGTAACACTAGGGGATGTCAG
rJMSF037G06+          CTTTTGATTATATTGAAATGAAATTTTGAAAATTGTGGGTGTAACACTAGGGGATGTCAG
                      ____________________________________________________________
consensus             CTTTTGATTATATTGAAATGAAATTTTGAAAATTGTGGGTGTAACACTAGGGGATGTCAG
 
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rJMSF029P20+          TGCTGTCGTCCTTCAATGTTATG                                     
rJMSF007B06+          TGCTGTCGTCCTNCAATGTTATGNAANGTAACTT                          
rJMSF006B15+          TGCTGTCGTCCTTCAATGTTATGTAATGTAAC                            
rJMSF037G06+          TGCTGTCGTCCTTCAATGTTATGTAATGTAACTTTAAATAGAAAAGAATTGTACATTATG
                      ____________________________________________________________
consensus             TGCTGTCGTCCTTCAATGTTATGTAATGTAACTTTAAATAGAAAAGAATTGTACATTATG