Contig 007179:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022D15Sequence654007179 (6)ref|XP_006362757.1|7e-24PREDICTED: uncharacterized protein LOC102580693 isoform X1 [Solanum tuberosum] 738007179 (6)ref|XP_009790699.1|332PREDICTED: uncharacterized protein LOC104238114 [Nicotiana sylvestris]
JMSF036O13Sequence617007179 (6)ref|XP_006362757.1|2e-41PREDICTED: uncharacterized protein LOC102580693 isoform X1 [Solanum tuberosum] 732007179 (6)ref|XP_009790699.1|323PREDICTED: uncharacterized protein LOC104238114 [Nicotiana sylvestris]
JMSF051N02Sequence632007179 (6)ref|XP_006362757.1|2e-69PREDICTED: uncharacterized protein LOC102580693 isoform X1 [Solanum tuberosum] 693007179 (6)ref|XP_009790699.1|328PREDICTED: uncharacterized protein LOC104238114 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF022D15-                                                            GGGCCGTATCC
                      ____________________________________________________________
consensus                                                              GGGCCGTATCC
 
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JMSF022D15-           AACTTTCTTTCCCAATCTCTCTCTCTAGCTAGTCTATATCTAGAAGCGAGCCCAAAAGAC
                      ____________________________________________________________
consensus             AACTTTCTTTCCCAATCTCTCTCTCTAGCTAGTCTATATCTAGAAGCGAGCCCAAAAGAC
 
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JMSF022D15-           AAAGATCATACTGGATTGAGGGAGGTTTCGAGTTCTGTTGCTCTCTCTCTCTCCCTCGCG
                      ____________________________________________________________
consensus             AAAGATCATACTGGATTGAGGGAGGTTTCGAGTTCTGTTGCTCTCTCTCTCTCCCTCGCG
 
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JMSF022D15-           AGAAGTTATCCATGAAGAAGACAACCTTTAGGGAAAATTCGATATATTTCAGTTAATCTG
                      ____________________________________________________________
consensus             AGAAGTTATCCATGAAGAAGACAACCTTTAGGGAAAATTCGATATATTTCAGTTAATCTG
 
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JMSF022D15-           ACCGGGGGGACTGAGCTTGTAGTTTTGGTAGGTGATGTTGATGGGAGATTTGAAGCAATT
                      ____________________________________________________________
consensus             ACCGGGGGGACTGAGCTTGTAGTTTTGGTAGGTGATGTTGATGGGAGATTTGAAGCAATT
 
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JMSF022D15-           CGATTGATATTGTTTATGAAAGAGGTCCACTGCTCTTATAACTTCTGGTGGCTAAAGTAC
JMSF036O13-                                 AGGTCCACTGCTCTTATAACTTCTGGTGGCTAAAGTAC
JMSF051N02-                                 AGGTCCACTGCTCTTATAACTTCTGGTGGCTAAAGTAC
                      ____________________________________________________________
consensus             CGATTGATATTGTTTATGAAAGAGGTCCACTGCTCTTATAACTTCTGGTGGCTAAAGTAC
 
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JMSF022D15-           ATGTGCTTCGAACATCATACATATATAGCAATGGCTTCTTGGTTTCTTGATAACCTCCCA
JMSF036O13-           ATGTGCTTCGAACATCATACATATATAGCAATGGCTTCTTGGTTTCTTGATAACCTCCCA
JMSF051N02-           ATGTGCTTCGAACATCATACATATATAGCAATGGCTTCTTGGTTTCTTGATAACCTCCCA
                      ____________________________________________________________
consensus             ATGTGCTTCGAACATCATACATATATAGCAATGGCTTCTTGGTTTCTTGATAACCTCCCA
 
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JMSF022D15-           TGGTTCAGACCTCTCTCTAAACAGGATGTGGCATCTACCACTATTTCCACTACCATACTA
JMSF036O13-           TGGTTCAGACCTCTCTCTAAACAGGATGTGGCATCTACCACTATTTCCACTACCATACTA
JMSF051N02-           TGGTTCAGACCTCTCTCTAAACAGGATGTGGCATCTACCACTATTTCCACTACCATACTA
rJMSF051N02+                                                          ACTACCATACTA
rJMSF022D15+              TCAGACCTCTCTCTAAACAGGATGTGGCATCTACCACTATTTCCACTACCATACTA
rJMSF036O13+                                                          ACTACCATACTA
                      ____________________________________________________________
consensus             TGGTTCAGACCTCTCTCTAAACAGGATGTGGCATCTACCACTATTTCCACTACCATACTA
 
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JMSF022D15-           ATACAGACTCCTAAACAAAGGGCACATATTGATATCAACTTTTGGCAATGGCCTATATTT
JMSF036O13-           ATACAGACTCCTAAACAAAGGGCACATATTGATATCAACTTTTGGCAATGGCCTATATTT
JMSF051N02-           ATACAGACTCCTAAACAAAGGGCACATATTGATATCAACTTTTGGCAATGGCCTATATTT
rJMSF051N02+          ATACAGACTCCTAAACAAAGGGCACATATTGATATCAACTTTTGGCAATGGCCTATATTT
rJMSF022D15+          ATACAGACTCCTAAACAAAGGGCACATATTGATATCAACTTTTGGCAATGGCCTATATTT
rJMSF036O13+          ATACAGACTCCTNAACAAAGGGCACATATTGATATCAACTTTTGGCAATGGCCTATATTT
                      ____________________________________________________________
consensus             ATACAGACTCCTAAACAAAGGGCACATATTGATATCAACTTTTGGCAATGGCCTATATTT
 
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JMSF022D15-           TCAATTATTCCTTGGGTAATTGATGCAAGGAATAAAATTCAAATGCCAGCTACTGTCAAC
JMSF036O13-           TCAATTATTCCTTGGGTAATTGATGCAAGGAATAAAATTCAAATGCCAGCTACTGTCAAC
JMSF051N02-           TCAATTATTCCTTGGGTAATTGATGCAAGGAATAAAATTCAAATGCCAGCTACTGTCAAC
rJMSF051N02+          TCAATTATTCCTTGGGTAATTGATGCAAGGAATAAAATTCAAATGCCAGCTACTGTCAAC
rJMSF022D15+          TCAATTATTCCTTGGGTAATTGATGCAAGGAATAAAATTCAAATGCCAGCTACTGTCAAC
rJMSF036O13+          TCAATTATTCCTTGGGTAATTGATGCAAGGAATAAAATTCAAATGCCAGCTACTGTCAAC
                      ____________________________________________________________
consensus             TCAATTATTCCTTGGGTAATTGATGCAAGGAATAAAATTCAAATGCCAGCTACTGTCAAC
 
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JMSF022D15-           CGCAAGTTCAAAATCAGCTCACAGTCTCGTGACAGAACTGAACTTGTTGCTCAAAACTCT
JMSF036O13-           CGCAAGTTCAAAATCAGCTCACAGTCTCGTGACAGAACTGAACTTGTTGCTCAAAACTCT
JMSF051N02-           CGCAAGTTCAAAATCAGCTCACAGTCTCGTGACAGAACTGAACTTGTTGCTCAAAACTCT
rJMSF051N02+          CGCAAGTTCAAAATCAGCTCACAGTCTCGTGACAGAACTGAACTTGTTGCTCAAAACTCT
rJMSF022D15+          CGCAAGTTCAAAATCAGCTCACAGTCTCGTGACAGAACTGAACTTGTTGCTCAAAACTCT
rJMSF036O13+          CGCAAGTTCAAAATCAGCTCACAGTCTCGTGACAGAACTGAACTTGTTGCTCAAAACTCT
                      ____________________________________________________________
consensus             CGCAAGTTCAAAATCAGCTCACAGTCTCGTGACAGAACTGAACTTGTTGCTCAAAACTCT
 
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JMSF022D15-           ATACGCTTCAGACCATATGTTTCCAAGGTTCCATGGCACACAG                 
JMSF036O13-           ATACGCTTCAGACCATATGTTTCCAAGGTTCCATGGCACACAGGTACAAGAGGTTTTCTA
JMSF051N02-           ATACGCTTCAGACCATATGTTTCCAAGGTTCCATGGCACACAGGTACAAGAGGTTTTCTA
rJMSF051N02+          ATACGCTTCAGACCATATGTTTCCAAGGTTCCATGGCACACAGGTACAAGAGGTTTTCTA
rJMSF022D15+          ATACGCTTCAGACCATATGTTTCCAAGGTTCCATGGCACACAGGTACAAGAGGTTTTCTA
rJMSF036O13+          ATACGCTTCAGACCATATGTTTCCAAGGTTCCATGGCACACAGGTACAAGAGGTTTTCTA
                      ____________________________________________________________
consensus             ATACGCTTCAGACCATATGTTTCCAAGGTTCCATGGCACACAGGTACAAGAGGTTTTCTA
 
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JMSF036O13-           TCTCAGTTGTTTCCACGATATGGGCATTACTGTGGCCCCAATTGGTCAAGTGGGA     
JMSF051N02-           TCTCAGTTGTTTCCACGATATGGGCATTACTGTGGCCCCAATTGGTCAAGTGGGAAAGAC
rJMSF051N02+          TCTCAGTTGTTTCCACGATATGGGCATTACTGTGGCCCCAATTGGTCAAGTGGGAAAGAC
rJMSF022D15+          TCTCAGTTGTTTCCACGATATGGGCATTACTGTGGCCCCAATTGGTCAAGTGGGAAAGAC
rJMSF036O13+          TCTCAGTTGTTTCCACGATATGGGCATTACTGTGGCCCCAATTGGTCAAGTGGGAAAGAC
                      ____________________________________________________________
consensus             TCTCAGTTGTTTCCACGATATGGGCATTACTGTGGCCCCAATTGGTCAAGTGGGAAAGAC
 
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JMSF051N02-           GGTGGATCTCCAATTTGGGATAGAAGACCAATTGATTGGCTGGACTTCTGTTGCTATTGC
rJMSF051N02+          GGTGGATCTCCAATTTGGGATAGAAGACCAATTGATTGGCTGGACTTCTGTTGCTATTGC
rJMSF022D15+          GGTGGATCTCCAATTTGGGATAGAAGACCAATTGATTGGCTGGACTTCTGTTGCTATTGC
rJMSF036O13+          GGTGGATCTCCAATTTGGGATAGAAGACCAATTGATTGGCTGGACTTCTGTTGCTATTGC
                      ____________________________________________________________
consensus             GGTGGATCTCCAATTTGGGATAGAAGACCAATTGATTGGCTGGACTTCTGTTGCTATTGC
 
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JMSF051N02-           CATGACATTGGTTACGATAGTCATGACCAGG                             
rJMSF051N02+          CATGACATTGGTTACGATAGTCATGACCAGGCTGAGCTTCTAAAGGCAGACCTAGCTTTC
rJMSF022D15+          CATGACATTGGTTACGATAGTCATGACCAGGCTGAGCTTCTAAAGGCAGACCTAGCTTTC
rJMSF036O13+          CATGACATTGGTTACGATAGTCATGACCAGGCTGAGCTTCTAAAGGCAGACCTAGCTTTC
                      ____________________________________________________________
consensus             CATGACATTGGTTACGATAGTCATGACCAGGCTGAGCTTCTAAAGGCAGACCTAGCTTTC
 
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rJMSF051N02+          CTCGAGTGCTTGGAGAAGCCTCACATGAGTACCAAGGGGGATCCTAACATCGCTACCCTC
rJMSF022D15+          CTCGAGTGCTTGGAGAAGCCTCACATGAGTACCAAGGGGGATCCTAACATCGCTACCCTC
rJMSF036O13+          CTCGAGTGCTTGGAGAAGCCTCACATGAGTACCAAGGGGGATCCTAACATCGCTACCCTC
                      ____________________________________________________________
consensus             CTCGAGTGCTTGGAGAAGCCTCACATGAGTACCAAGGGGGATCCTAACATCGCTACCCTC
 
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rJMSF051N02+          TACAAAACAATGTGTATATCTGGTCTCAGGAATGTACTGATACCTTACAGGCAACAACTG
rJMSF022D15+          TACAAAACAATGTGTATATCTGGTCTCAGGAATGTACTGATACCTTACAGGCAACAACTG
rJMSF036O13+          TACAAAACAATGTGTATATCTGGTCTCAGGAATGTACTGATACCTTACGGGCAACAACTG
                      ____________________________________________________________
consensus             TACAAAACAATGTGTATATCTGGTCTCAGGAATGTACTGATACCTTACAGGCAACAACTG
 
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rJMSF051N02+          GTGAAGTTACAATCAGGGCAATTATCTTATCAGTTTGGATGGTTAAGCGGTGTTAAATGG
rJMSF022D15+          GTGAAGTTACAATCAGGGCAATTATCTTATCAGTTTGGATGGTTAAGCGGTGTTAAATGG
rJMSF036O13+          GTGAAGTTACAATCAGGGCAATTATCTTATCAGTTTGGATGGTTAAGCGGTGTTAAATGG
                      ____________________________________________________________
consensus             GTGAAGTTACAATCAGGGCAATTATCTTATCAGTTTGGATGGTTAAGCGGTGTTAAATGG
 
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rJMSF051N02+          AAATGGCCGAAGCTTCAGAATACTTGAAGAGAAGAATAAAGATGTAGCTTGTATCCTATT
rJMSF022D15+          AAATGGCCGAAGCTTCAGAATACTTGAAGAGAAGAATAAAGATGTAGCTTGTATCCTATT
rJMSF036O13+          AAATGGCCGAAGCTTCAGAATACTTGAAGAGAAGAATAAAGATGTAGCTTGTATCCTATT
                      ____________________________________________________________
consensus             AAATGGCCGAAGCTTCAGAATACTTGAAGAGAAGAATAAAGATGTAGCTTGTATCCTATT
 
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rJMSF051N02+          ATTATGAAATGATC                                              
rJMSF022D15+          ATTATGAAATGATC                                              
rJMSF036O13+          ATTATGAAATGATCAATGTAATGTCCTCGGAAACTGATGCTTCTGTATATTAAAAAAATT
                      ____________________________________________________________
consensus             ATTATGAAATGATCAATGTAATGTCCTCGGAAACTGATGCTTCTGTATATTAAAAAAATT