Contig 007175:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF032P10-                                                              GGAGGCTGA
                      ____________________________________________________________
consensus                                                                GGAGGCTGA
 
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JMSF032P10-           GAAATTTCACGCGCGCCGGAACACAAAATTATGGAAGATGGAGAGAAGCAAGAGCCGAGC
                      ____________________________________________________________
consensus             GAAATTTCACGCGCGCCGGAACACAAAATTATGGAAGATGGAGAGAAGCAAGAGCCGAGC
 
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JMSF032P10-           AATCTAGCAATGTCAGCCGCCGCTGAACCGCCCACCGACCGGCCGGTTCGCGTCTATGCC
                      ____________________________________________________________
consensus             AATCTAGCAATGTCAGCCGCCGCTGAACCGCCCACCGACCGGCCGGTTCGCGTCTATGCC
 
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JMSF032P10-           GACGGAATATACGACCTCTTCCACTTTGGCCATGCCCGATCTCTCGAACAAGCCAAGAAA
                      ____________________________________________________________
consensus             GACGGAATATACGACCTCTTCCACTTTGGCCATGCCCGATCTCTCGAACAAGCCAAGAAA
 
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JMSF032P10-           CTGTTTCCAAACACATATCTTCTTGTTGGATGTTGCAATGATGAAGTCACTAACAAATTC
                      ____________________________________________________________
consensus             CTGTTTCCAAACACATATCTTCTTGTTGGATGTTGCAATGATGAAGTCACTAACAAATTC
 
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JMSF032P10-           AAGGGCAAGACTGTTATGACCGATAAGGAGCGATATGAATCTCTTCGTCACTGCAAGTGG
                      ____________________________________________________________
consensus             AAGGGCAAGACTGTTATGACCGATAAGGAGCGATATGAATCTCTTCGTCACTGCAAGTGG
 
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JMSF032P10-           GTTGATGAAGTTATTCCAGATGCACCTTGGGTGGTCACTCCCGAATTCCTTGAGAAACAT
                      ____________________________________________________________
consensus             GTTGATGAAGTTATTCCAGATGCACCTTGGGTGGTCACTCCCGAATTCCTTGAGAAACAT
 
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JMSF032P10-           CAGATTGATTATGTGGCTCATGATTCTCTTCCTTATGCTGATGCAAGCGGGGCTGGAAAC
rJMSF032P10+                                             TGCTGATGCCAGCGGGGCTGGAAAC
rJMSF036E04+                                             TGCTGATGCCAGCGGGGCTGGAAAC
                      ____________________________________________________________
consensus             CAGATTGATTATGTGGCTCATGATTCTCTTCCTTATGCTGATGCCAGCGGGGCTGGAAAC
 
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JMSF032P10-           GATGTTTATGAGTTTGTCAAGGCCGTTGGAAAATTCAAGGAGACAAAACGGACTGATGGA
rJMSF032P10+          GATGTTTATGAGTTTGTCAAGGCCGTTGGAAAATTCAAGGAGACAAAACGGACTGATGGA
rJMSF036E04+          GATGTTTATGAG-TTGTCAAGGCCGTTGGAAAATTCAAGGAGACAAAACGGACTGATGGA
                      ____________________________________________________________
consensus             GATGTTTATGAGTTTGTCAAGGCCGTTGGAAAATTCAAGGAGACAAAACGGACTGATGGA
 
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JMSF032P10-           ATATCCACATCAGATATAATAATGAGGATTATAAAAGATTACAATGAGTATGTGATGCGT
rJMSF032P10+          ATATCCACATCAGATATAATAATGAGGATTATAAAAGATTACAATGAGTATGTGATGCGT
rJMSF036E04+          ATATCCACATCAGATATAATAATGAGGATTATAAAAGATTACAATGAGTATGTGATGCGT
                      ____________________________________________________________
consensus             ATATCCACATCAGATATAATAATGAGGATTATAAAAGATTACAATGAGTATGTGATGCGT
 
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JMSF032P10-           AATTTGGACAGAGGATATTCAAGAAAGGATCTCGGTTTGAGTTATGTGAAGGAGAAAAGG
rJMSF032P10+          AATTTGGACAGAGGATATTCAAGAAAGGATCTCGGTTTGAGTTATGTGAAGGAGAAAAGG
rJMSF036E04+          AATTTGGACAGAGGATATTCAAGAAAAGATCTCGGTTTGAGTTATGTGAAGGAGAAAAGG
                      ____________________________________________________________
consensus             AATTTGGACAGAGGATATTCAAGAAAGGATCTCGGTTTGAGTTATGTGAAGGAGAAAAGG
 
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JMSF032P10-           TTAAGAGTAAACAGGGGTTTGAAGACGTTGCAAGAGAGAGTAAAGAAGCACCAAGAGAGA
rJMSF032P10+          TTAAGAGTAAACAGGGGTTTGAAGACGTTGCAAGAGAGAGTAAAGAAGCAACAAGAGAGA
rJMSF036E04+          TTAAGAGTAAACAGGGGTTTGAAGACGTTGCAAGAGAGAGTAAAGAAGCAACAAGAGAGA
                      ____________________________________________________________
consensus             TTAAGAGTAAACAGGGGTTTGAAGACGTTGCAAGAGAGAGTAAAGAAGCAACAAGAGAGA
 
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JMSF032P10-           GTGG                                                        
rJMSF032P10+          GTGGAAGAGAAGATACAAACTGTGGCAAAAACAGCTCGGATGCGTCGTAATTTGTGGGTT
rJMSF036E04+          GTGGAAGAGAAGATACAAACTGTGGCAAAAACAGCTCGGATGCGTCGTAATTTGTGGGTT
                      ____________________________________________________________
consensus             GTGGAAGAGAAGATACAAACTGTGGCAAAAACAGCTCGGATGCGTCGTAATTTGTGGGTT
 
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rJMSF032P10+          GAGAATGCCGACCGATTAGTTGCTGGATTTCTCGAAATGTTTGAAGAAGGTTGCCACAAA
rJMSF036E04+          GAGAATGCCGACCGATTAGTTGCTGGATTTCTCGAAATGTTTGAAGAAGGTTGCCACAAA
                      ____________________________________________________________
consensus             GAGAATGCCGACCGATTAGTTGCTGGATTTCTCGAAATGTTTGAAGAAGGTTGCCACAAA
 
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rJMSF032P10+          ATGGGCACCGCCATCAGGGACCGAATCCAAGAACAGATAAGCACTACGAATATAAAAGAA
rJMSF036E04+          ATGGGCACCGCCATCAGGGACCGAATCCAAGAACAGATAAGCACTACGAATATAAAAGAA
                      ____________________________________________________________
consensus             ATGGGCACCGCCATCAGGGACCGAATCCAAGAACAGATAAGCACTACGAATATAAAAGAA
 
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rJMSF032P10+          CTGTTATATGATAATGAAGACGATGATGACTATTATGAGTACGAGTATTACTATGGTGAT
rJMSF036E04+          CTGTTATATGATAATGAAGACGATGATGACTATTATGAGTACGAGTATTACTATGGTGAT
                      ____________________________________________________________
consensus             CTGTTATATGATAATGAAGACGATGATGACTATTATGAGTACGAGTATTACTATGGTGAT
 
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rJMSF032P10+          AGCAGCGAAGAAGATGAAGATGAATACGAATATGGCAAGGGTGAAAAGCGGCCTTCCTTG
rJMSF036E04+          AGCAGCGAAGAAGATGAAGATGAATACGAATATGGCAAGGGTGAAAAGCGGCCTTCCTTG
                      ____________________________________________________________
consensus             AGCAGCGAAGAAGATGAAGATGAATACGAATATGGCAAGGGTGAAAAGCGGCCTTCCTTG
 
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rJMSF032P10+          GCCTGGGTGAGTTGATACGTGGAACCGGTTATGTTTACATGAAACAGCAAATGTTTGGCC
rJMSF036E04+          GCCTGGGTGAGTTGATACGTGGAACCGGTTATGTTTACATGAAACAGCAAATGTTTGGCC
                      ____________________________________________________________
consensus             GCCTGGGTGAGTTGATACGTGGAACCGGTTATGTTTACATGAAACAGCAAATGTTTGGCC
 
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rJMSF032P10+          TATGGTGAGACTATGATGTGTTTTATGTCAAGTTTCAAACTAGTTTTAGTGTGCCACTTT
rJMSF036E04+          TATGGTGAGACTATGATGTGTTTTATGTCAAGTTTCAAACTAGTTTTAGTGTGCCACTTT
                      ____________________________________________________________
consensus             TATGGTGAGACTATGATGTGTTTTATGTCAAGTTTCAAACTAGTTTTAGTGTGCCACTTT
 
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rJMSF032P10+          CACGTATAGGTGTGCTGTTTGTATGTAAATTTGTATCTATCGTGTGATGACACAACTATT
rJMSF036E04+          CACGTATAGGTGTGCTGTTTGTATGTAAATTTGTATCTATCGTGTGATGACACAACTATT
                      ____________________________________________________________
consensus             CACGTATAGGTGTGCTGTTTGTATGTAAATTTGTATCTATCGTGTGATGACACAACTATT