| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF001K05 | Sequence | 365 | 002043 (5) | ref|XP_011079740.1| | 5e-44 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Sesamum indicum] | 733 | 007168 (5) | gb|ADL70207.1| | 2e-75 | transport inhibitor response 1 [Arabidopsis thaliana] gb|ADL70211.1| transport i |
| JMSF001L05 | Sequence | 392 | 002043 (5) | ref|XP_011082496.1| | 1e-49 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Sesamum indicum] ref|XP | 737 | 007168 (5) | gb|ADL70207.1| | 2e-75 | transport inhibitor response 1 [Arabidopsis thaliana] gb|ADL70211.1| transport i |
| JMSF031N17 | Sequence | 623 | 002043 (5) | gb|AFP19451.1| | 1e-91 | transport inhibitor response 1 [Camellia sinensis] | 734 | 007168 (5) | gb|ADL70207.1| | 2e-67 | transport inhibitor response 1 [Arabidopsis thaliana] gb|ADL70211.1| transport i |
| JMSF034F04 | Sequence | 707 | 002043 (5) | ref|XP_011082496.1| | 3e-112 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Sesamum indicum] ref|XP | 725 | 007168 (5) | gb|ADL70207.1| | 5e-72 | transport inhibitor response 1 [Arabidopsis thaliana] gb|ADL70211.1| transport i |
| JMSF044F03 | Sequence | 791 | 002043 (5) | ref|XP_011082496.1| | 5e-135 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Sesamum indicum] ref|XP | 675 | 007168 (5) | gb|ADL70207.1| | 8e-76 | transport inhibitor response 1 [Arabidopsis thaliana] gb|ADL70211.1| transport i |
This contig is upended
. : . : . : . : . : . :
rJMSF044F03+ ACTGATCGGGTGTTTGAGTAT
rJMSF001L05+ CCTCACTGATCGGGTGTTTGAGTAT
rJMSF001K05+ ACTGATCGGGTGTTTGAGTAT
rJMSF031N17+ ACTGATCGGGTGTTNGAGTAT
rJMSF034F04+ GAGTAT
____________________________________________________________
consensus CCTCACTGATCGGGTGTTTGAGTAT
. : . : . : . : . : . :
rJMSF044F03+ ATTGGGACTTACGCGAAGAAGTTAGAGATGCTTTCTATAGCCTTTGCTGGGGATAGTGAC
rJMSF001L05+ ATTGGGACTTACGCGAAGAAGTTAGAGATGCTTTCTATAGCCTTTGCTGGGGATAGTGAC
rJMSF001K05+ ATTGGGACTTACGCGAAGAAGTTAGAGATGCTTTCTATAGCCTTTGCTGGGGATAGTGAC
rJMSF031N17+ ATT-GGACTTACGCGAAGAAGTTAGAGATGCTTTCTATAGCCTTTGCTGGGGATAGTGAC
rJMSF034F04+ ATTGGGACTTACGCGAAGAAGTTAGAGATGCTTTCTATAGCCTTTGCTGGGGATAGTGAC
____________________________________________________________
consensus ATTGGGACTTACGCGAAGAAGTTAGAGATGCTTTCTATAGCCTTTGCTGGGGATAGTGAC
. : . : . : . : . : . :
rJMSF044F03+ TTGGGCCTCAACCACGTGCTGTCAGGTTGTGAAAGCCTCCGAAAGTTGGAGATAAGAGAC
rJMSF001L05+ TTGGGCCTCAACCACGTGCTGTCAGGTTGTGAAAGCCTCCGAAAGTTGGAGATAAGAGAC
rJMSF001K05+ TTGGGCCTCAACCACGTGCTGTCAGGTTGTGAAAGCCTCCGAAAGTTGGAGATAAGAGAC
rJMSF031N17+ TTGGGCCTCAACCACGTGCTGTCAGGTTGTGAAAGCCTCCGAAAGTTGGAGATAAGAGAC
rJMSF034F04+ TTGGGCCTCAACCACGTGCTGTCAGGTTGTGAAAGCCTCCGAAAGTTGGAGATAAGAGAC
____________________________________________________________
consensus TTGGGCCTCAACCACGTGCTGTCAGGTTGTGAAAGCCTCCGAAAGTTGGAGATAAGAGAC
. : . : . : . : . : . :
rJMSF044F03+ TGCCCATTTGGGGATGATGCTCTCTTAGCCAACGCTGCAAAGCTGGAGACAATGCGATCC
rJMSF001L05+ TGCCCATTTGGGGATGATGCTCTCTTAGCCAACGCTGCAAAGCTGGAGACAATGCGATCC
rJMSF001K05+ TGCCCATTTGGGGATGATGCTCTCTTAGCCAACGCTGCAAAGCTGGAGACAATGCGATCC
rJMSF031N17+ TGCCCATTTGGGGATGATGCTCTCTTAGCCAACGCTGCAAAGCTGGTGACAATGCGATCC
rJMSF034F04+ TGCCCATTTGGGGATGATGCTCTCTTAGCCAACGCTGCAAAGCTGGAGACAATGCGATCC
____________________________________________________________
consensus TGCCCATTTGGGGATGATGCTCTCTTAGCCAACGCTGCAAAGCTGGAGACAATGCGATCC
. : . : . : . : . : . :
rJMSF044F03+ CTTTGGATGTCTTCTTGTTCGGTAAGTTTTGGAGCATGCAAGATGCTAGCTAAGAAGATG
rJMSF001L05+ CTTTGGATGTCTTCTTGTTCGGTAAGTTTTGGAGCATGCAAGATGCTAGCTAAGAAGATG
rJMSF001K05+ CTTTGGATGTCTTCTTGTTCGGTAAGTTTTGGAGCATGCAAGATGCTAGCTAAGAAGATG
rJMSF031N17+ CTTTGGATGTCTTCTTGTTCGGTAAGTTTTGGAGCATGCAAGATGCTAGCTAAGAAGATG
rJMSF034F04+ CTTTGGATGTCTTCTTGTTCGGTAAGTTTTGGAGCATGCAAGATGCTAGCTAAGAAGATG
____________________________________________________________
consensus CTTTGGATGTCTTCTTGTTCGGTAAGTTTTGGAGCATGCAAGATGCTAGCTAAGAAGATG
. : . : . : . : . : . :
rJMSF044F03+ CCCGGGCTTAACGTTGAAGTTATAGATGAAAGTGACCCTCCAGGTTCAAGGCTGGAAAGC
rJMSF001L05+ CCCGGGCTTAACGTTGAAGTTATAGATGAAAGTGACCCTCCAGGTTCAAGGCTGGAAAGC
rJMSF001K05+ CCCGGGCTTAACGTTGAAGTTATAGATGAAAGTGACCCTCCAGGTTCAAGGCTGGAAAGC
rJMSF031N17+ CCCGGGCTTAACGTTGAAGTTATAGATGAAAGTGACCCTCCAGGTTCAAGGCTGGAAAGC
rJMSF034F04+ CCCGGGCTTAACGTTGAAGTTATAGATGAAAGTGACCCTCCAGGTTCAAGGCTGGAAAGC
____________________________________________________________
consensus CCCGGGCTTAACGTTGAAGTTATAGATGAAAGTGACCCTCCAGGTTCAAGGCTGGAAAGC
. : . : . : . : . : . :
rJMSF044F03+ ATTCCTGTTGAGAGATTATACATATACCGAACAGTTTCAGGACCTAGGTTCGATAAGCCT
rJMSF001L05+ ATTCCTGTTGAGAGATTATACATATACCGAACAGTTTCAGGACCTAGGTTCGATAAGCCT
rJMSF001K05+ ATTCCTGTTGAGAGATTATACATATACCGAACAGTTTCAGGACCTAGGTTCGATAAGCCT
rJMSF031N17+ ATTCCTGTTGAGAGATTATACATATACCGAACAGTTTCAGGACCTAGGTTCGATAAGCCT
rJMSF034F04+ ATTCCTGTTGAGAGATTATACATATACCGAACAGTTTCAGGACCTAGGTTCGATAAGCCT
____________________________________________________________
consensus ATTCCTGTTGAGAGATTATACATATACCGAACAGTTTCAGGACCTAGGTTCGATAAGCCT
. : . : . : . : . : . :
rJMSF044F03+ GCCTTCGTTTGGATGATGGATAACGATGCAACACCAAGGTGTTCTTGACATTCTTCTTCT
rJMSF001L05+ GCCTTCGTTTGGATGATGGATAACGATGCAACACCAAGGTGTTCTTGACATTCTTCTTCT
rJMSF001K05+ GCCTTCGTTTGGATGATGGATAACGATGCAACACCAAGGTGTTCTTGACATTCTTCTTCT
rJMSF031N17+ GCCTTCGTTTGGATGATGGATAACGATGCAACACCAAGGTGTTCTTGACATTCTTCTTCT
rJMSF034F04+ GCCTTCGTTTGGATGATGGATAACGATGCAACACCAAGGTGTTCTTGACATTCTTCTTCT
____________________________________________________________
consensus GCCTTCGTTTGGATGATGGATAACGATGCAACACCAAGGTGTTCTTGACATTCTTCTTCT
. : . : . : . : . : . :
rJMSF044F03+ GCAGGGAGAGGGGAGATTTGTATTTTTCTCGGCATTAATTAGTAGTTCTTGTGGTGGTTG
rJMSF001L05+ GCAGGGAGAGGGGAGATTTGTATTTTTCTCGGCATTAATTAGTAGTTCTTGTGGTGGTTG
rJMSF001K05+ GCAGGGAGAGGGGAGATTTGTATTTTTCTCGGCATTAATTAGTAGTTCTTGTGGTGGTTG
rJMSF031N17+ GCAGGGAGAGGGGAGATTTGTATTTTTCTCGGCATTAATTAGTAGTTCTTGTGGTGGTTG
rJMSF034F04+ GCAGGGAGAGGGGAGATTTGTATTTTTCTCGGCATTAATTAGTAGTTCTTGTGGTGGTTG
____________________________________________________________
consensus GCAGGGAGAGGGGAGATTTGTATTTTTCTCGGCATTAATTAGTAGTTCTTGTGGTGGTTG
. : . : . : . : . : . :
rJMSF044F03+ AAGTGCTGAAAAGAGGCTACTCTAGGCATGAGGAGTTGAGAAGCCATATTATTTTAGCCT
rJMSF001L05+ AAGTGCTGAAAAGAGGCTACTCTAGGCATGAGGAGTTGAGAAGCCATATTATTTTAGCCT
rJMSF001K05+ AAGTGCTGAAAAGAGGCTACTCTAGGCATGAGGAGTTGAGAAGCCATATTATTTTAGCCT
rJMSF031N17+ AAGTGCTGAAAAGAGGCTACTCTAGGCATGAGGAGTTGAGAAGCCATATTATTTTAGCCT
rJMSF034F04+ AAGTGCTGAAAAGAGGCTACTCTAGGCATGAGGAGTTGAGAAGCCATATTATTTTAGCCT
____________________________________________________________
consensus AAGTGCTGAAAAGAGGCTACTCTAGGCATGAGGAGTTGAGAAGCCATATTATTTTAGCCT
. : . : . : . : . : . :
rJMSF044F03+ TGGCTGAGGTATTCCACAGAAATTAGCAACTCCCATAGACTAAAAGAGATTAAACTCTTC
rJMSF001L05+ TGGCTGAGGTATTCCACAGAAATTAGCAACTCCCATAGACTAAAAGAGATTAAACTCTTC
rJMSF001K05+ TGGCTGAGGTATTCCACAGAAATTAGCAACTCCCATAGACTAAAAGAGATTAAACTCTTC
rJMSF031N17+ TGGCTGAGGTATTCCACAGAAATTAGCAACTCCCATAGACTAAAAGAGATTAAACTCTTC
rJMSF034F04+ TGGCTGAGGTATTCCACAGAAATTAGCAACTCCCATAGACTAAAAGAGATTAAACTCTTC
____________________________________________________________
consensus TGGCTGAGGTATTCCACAGAAATTAGCAACTCCCATAGACTAAAAGAGATTAAACTCTTC
. : . : . : . : . : . :
rJMSF044F03+ ATATTGCANCTGTGTATCAATTGTTTTTTCTCTCATTTCCTCTCCAC
rJMSF001L05+ ATATTGCA-CTGTGTATCAATTGTTTTTTCTCTCATTTCCTCTCCACATCTCCCTATGTG
rJMSF001K05+ ATATTGCA-CTGTGTATCAATTGTTTTTTCTCTCATTTCCTCTCCACATCTCCCTATGTG
rJMSF031N17+ ATATTGCA-CTGTGTATCAATTGTTTTTTCTCTCATTTCCTCTCCACATCTCCCTATGTG
rJMSF034F04+ ATATTGCA-CTGTGTATCAATTGTTTTTTCTCTCATTTCCTCTCCACATCTCCCTATGTG
____________________________________________________________
consensus ATATTGCA-CTGTGTATCAATTGTTTTTTCTCTCATTTCCTCTCCACATCTCCCTATGTG
. : . : . : . : . : . :
rJMSF001L05+ TTATTGATAGACTTGCAGATCAGTTTCAGCTCTTTGCAGGGCCAAATGCAGAC
rJMSF001K05+ TTATTGATAGACTTGCAGATCAGTTTCAGCTCTTTGCAGGGCCAAATGCAGAC
rJMSF031N17+ TTATTGATAGACTTGCAGATCAGTTTCAGCTCTTTGCAGGGCCAAATGCAGAC
rJMSF034F04+ TTATTGATAGACTTGCAGATCAGTTTCAGCTCTTTGCAGGGCCAAATGCAGACTTGTGCT
____________________________________________________________
consensus TTATTGATAGACTTGCAGATCAGTTTCAGCTCTTTGCAGGGCCAAATGCAGACTTGTGCT