Contig 007167:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046A13-                                                                      G
                      ____________________________________________________________
consensus                                                                        G
 
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JMSF046A13-           GGACCGTTCACGGCGGCGGACGCCATACCCGGACTATGAAAATCCGACGAGAACACTCAC
                      ____________________________________________________________
consensus             GGACCGTTCACGGCGGCGGACGCCATACCCGGACTATGAAAATCCGACGAGAACACTCAC
 
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JMSF046A13-           CGTAGCGCCACAGAATCAATAAACAGACTGCAAAACCCCAGTTCATGGGAAGGTGGAGAG
JMSF033M18-                 GCCACAGAATCAATAAACAGACTGCAAAACCCCAGTTCATGGGAAGGTGGAGAG
                      ____________________________________________________________
consensus             CGTAGCGCCACAGAATCAATAAACAGACTGCAAAACCCCAGTTCATGGGAAGGTGGAGAG
 
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JMSF046A13-           CTGCTGCTCTCACTCTCTCACGCATAGCCACCAAGCCCAAACCAACCGATCCCAACTCCC
JMSF033M18-           CTGCTGCTCTCACTCTCTCACGCATAGCCACCAAGCCCAAACCAACCGATCCCAACTCCC
                      ____________________________________________________________
consensus             CTGCTGCTCTCACTCTCTCACGCATAGCCACCAAGCCCAAACCAACCGATCCCAACTCCC
 
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JMSF046A13-           CCGCGAACCCGCCTCGCAGGTTCGCAGATTTTGCATCCTCAGCTTCAGCGCCCATATTTC
JMSF033M18-           CCGCGAACCCGCCTCGCAGGTTCGCAGATTTTGCATCCTCAGCTTCAGCGCCCATATTTC
                      ____________________________________________________________
consensus             CCGCGAACCCGCCTCGCAGGTTCGCAGATTTTGCATCCTCAGCTTCAGCGCCCATATTTC
 
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JMSF046A13-           GATTGCTGAATTTGAAGTCGTTTTCCGCCGCCCCGTGGCCGTCTCCTCTCTACATCGATG
JMSF033M18-           GATTGCTGAATTTGAAGTCGTTTTCCGCCGCCCCGTGGCCGTCTCCTCTCTACATCGATG
JMSF051O20+                                                               CATCGATG
                      ____________________________________________________________
consensus             GATTGCTGAATTTGAAGTCGTTTTCCGCCGCCCCGTGGCCGTCTCCTCTCTACATCGATG
 
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JMSF046A13-           AATTCGACTGCAATCCTGTTGATTTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
JMSF033M18-           AATTCGACTGCAATCCTGTTGATTTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
JMSF051O20+           AATTCGACTGCAATCCTGTTGA-TTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
                      ____________________________________________________________
consensus             AATTCGACTGCAATCCTGTTGATTTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
 
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JMSF046A13-           CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
JMSF033M18-           CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
JMSF051O20+           CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
                      ____________________________________________________________
consensus             CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
 
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JMSF046A13-           AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
JMSF033M18-           AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
JMSF051O20+           AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
                      ____________________________________________________________
consensus             AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
 
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JMSF046A13-           TCA                                                         
JMSF033M18-           TCAGATTTCGGAACTTTCCATTATCCACTGCCATTGGAATTGGAGAAAATGCAGACTGCT
JMSF051O20+           TCAGATTTCGGAACTTTCCATTATCCACTGCCATTGGAATTGGAGAAAATGCAGACTGCT
                      ____________________________________________________________
consensus             TCAGATTTCGGAACTTTCCATTATCCACTGCCATTGGAATTGGAGAAAATGCAGACTGCT
 
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JMSF033M18-           TCCACCACATGGTTGTCTTCCAGTATGGTTCAGCTGTCCTGTTCAATGTCGATGATGATG
JMSF051O20+           TCCACCACATGGTTGTCTTCCAGTATGGTTCAGCTGTCCTGTTCAATGTCGATGATGATG
                      ____________________________________________________________
consensus             TCCACCACATGGTTGTCTTCCAGTATGGTTCAGCTGTCCTGTTCAATGTCGATGATGATG
 
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JMSF033M18-           AAGCCGAATGCTACCTTCAAACAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
JMSF051O20+           AAGCCGAATGCTACCTTCAAACAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
rJMSF046A13+                                                              GGAGATGA
rJMSF033M18+           AGCCGAATGCTACCTTCAANCAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
                      ____________________________________________________________
consensus             AAGCCGAATGCTACCTTCAAACAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
 
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JMSF033M18-           AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
JMSF051O20+           AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
rJMSF046A13+          AAAAAGATGATTATGCAGTAAANGAGAAGCCATCATTGATTGAGGATATGGAGGGGACGC
rJMSF033M18+          AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
                      ____________________________________________________________
consensus             AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
 
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JMSF033M18-           CCGGACTACATTGTTCTGA                                         
JMSF051O20+           CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
rJMSF046A13+          CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
rJMSF033M18+          CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
                      ____________________________________________________________
consensus             CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
 
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JMSF051O20+           CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
rJMSF046A13+          CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
rJMSF033M18+          CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
                      ____________________________________________________________
consensus             CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
 
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JMSF051O20+           TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
rJMSF046A13+          TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
rJMSF033M18+          TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
                      ____________________________________________________________
consensus             TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
 
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JMSF051O20+           CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
rJMSF046A13+          CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
rJMSF033M18+          CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
                      ____________________________________________________________
consensus             CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
 
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JMSF051O20+           CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATA         
rJMSF046A13+          CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATACTCGAGTAC
rJMSF033M18+          CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATACTCGAGTAC
                      ____________________________________________________________
consensus             CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATACTCGAGTAC
 
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rJMSF046A13+          CTGTCTGAGGAATATGAGGTGACACAACGCTTTGCCAACCTTAACTTCAAACTCAAATTT
rJMSF033M18+          CTGTCTGAGGAATATGAGGTGACACAACGCTTTGCCAACCTTAACTTCAAACTCAAATTT
                      ____________________________________________________________
consensus             CTGTCTGAGGAATATGAGGTGACACAACGCTTTGCCAACCTTAACTTCAAACTCAAATTT
 
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rJMSF046A13+          GTTGAGCATAACATTCATTTTCTTCAGGAAGTTCTTCAAAACAGAAAGTCGGATCTACTA
rJMSF033M18+          GTTGAGCATAACATTCATTTTCTTCAGGAAGTTCTTCAAAACAGAAAGTCGGATCTACTA
                      ____________________________________________________________
consensus             GTTGAGCATAACATTCATTTTCTTCAGGAAGTTCTTCAAAACAGAAAGTCGGATCTACTA
 
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rJMSF046A13+          GAGTGGGTCATCATAGTTTTACTGGCCATAGACAACATTGTTTCTGTATATGAGATTCTT
rJMSF033M18+          GAGTGGGTCATCATAGTTTTACTGGCCATAGACAACATTGTTTCTGTATATGAGATTCTT
                      ____________________________________________________________
consensus             GAGTGGGTCATCATAGTTTTACTGGCCATAGACAACATTGTTTCTGTATATGAGATTCTT
 
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rJMSF046A13+          CGCGAGTCGACTGCTGTTCCTATGTGAACATCATATATATGCACTAATCATATTCTTTTT
rJMSF033M18+          CGCGAGTCGACTGCTGTTCCTATGTGAACATCATATATATGCACTAATCATATTCTTTTT
                      ____________________________________________________________
consensus             CGCGAGTCGACTGCTGTTCCTATGTGAACATCATATATATGCACTAATCATATTCTTTTT
 
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rJMSF046A13+          AGCCTATAACATTGATACAGAACACCCTCAAAGAAAGGGGATGTATTTTT          
rJMSF033M18+          AGCCTATAACATTGATACAGAACACCCTCAAAGAAAGGGGATGTATTTTTTGTTTCATCT
                      ____________________________________________________________
consensus             AGCCTATAACATTGATACAGAACACCCTCAAAGAAAGGGGATGTATTTTTTGTTTCATCT