| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF007J05 | Sequence | 322 | 007157 (5) | 808 | 007157 (5) | ref|XP_002530954.1| | 9e-100 | Protein grpE, putative [Ricinus communis] gb|EEF31426.1| Protein grpE, putative | |||
| JMSF031G22 | Sequence | 536 | 007157 (5) | ref|XP_009592594.1| | 3e-05 | PREDICTED: grpE protein homolog, mitochondrial isoform X2 [Nicotiana tomentosif | 584 | 007157 (5) | gb|KDO46641.1| | 2e-67 | hypothetical protein CISIN_1g019043mg [Citrus sinensis] |
| JMSF033D06 | Sequence | 701 | 011768 (4) | ref|XP_009607690.1| | 1e-07 | PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X2 [Nicotian | 272 | 007157 (5) | gb|KDO46641.1| | 1e-32 | hypothetical protein CISIN_1g019043mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF031G22- GACCAATCCACCATACTCACCTGTCCA
____________________________________________________________
consensus GACCAATCCACCATACTCACCTGTCCA
. : . : . : . : . : . :
JMSF007J05- GTCCATTTCAATCCTCTCTCTCTCTCTCTCCCTCTTCATCCCATGGCCTC
JMSF031G22- ACTGCTTTCCGTCCATTTCAATCCTCTCTCTCTCTCTCTCCCTCTTCATCCCATGGCCTC
____________________________________________________________
consensus ACTGCTTTCCGTCCATTTCAATCCTCTCTCTCTCTCTCTCCCTCTTCATCCCATGGCCTC
. : . : . : . : . : . :
JMSF007J05- CACTGTCCTGAGGACGGCCTCCGCCTTGAGGGCGCCGCCGTCAGCTTCCCTCACCGCCAC
JMSF031G22- CACTGTCCTGAGGACGGCCTCCGCCTTGAGGGCGCCGCCGTCAGCTTCCCTCACCGCCAC
____________________________________________________________
consensus CACTGTCCTGAGGACGGCCTCCGCCTTGAGGGCGCCGCCGTCAGCTTCCCTCACCGCCAC
. : . : . : . : . : . :
JMSF007J05- CGCTAACTCTTCCACCTCACGCCATAATTTCTCCTGCGTCGTTTCCTTTCCCAGACGGAG
JMSF031G22- CGCTAACTCTTCCACCTCACGCCATAATTTCTCCTGCGTCGTTTCCTTTCCCAGACGGAG
____________________________________________________________
consensus CGCTAACTCTTCCACCTCACGCCATAATTTCTCCTGCGTCGTTTCCTTTCCCAGACGGAG
. : . : . : . : . : . :
JMSF007J05- ACGGGCTTCGTCACGCCTCCCTGCACGCTGTCGCGTCCACCACCACTCTTCTGGACCCGC
JMSF031G22- ACGGGCTTCGTCACGCCTCCCTGCACGCTGTCGCGTCCACCACCACTCTTCTGGACCCGC
____________________________________________________________
consensus ACGGGCTTCGTCACGCCTCCCTGCACGCTGTCGCGTCCACCACCACTCTTCTGGACCCGC
. : . : . : . : . : . :
JMSF007J05- AATTCGACTGCCCGTGAGCCGCTCATCGGGGAAATTCTCGCTCTTTGCTTCTGATGGAGA
JMSF031G22- AATTCGACTGCCCGTGAGCCGCTCATCGGGGAAATTCTCGCTCTTTGCTTCTGATGGAGA
____________________________________________________________
consensus AATTCGACTGCCCGTGAGCCGCTCATCGGGGAAATTCTCGCTCTTTGCTTCTGATGGAGA
. : . : . : . : . : . :
JMSF007J05- CGTTGCGGAGACTGCTCAGACTGAACCTCA
JMSF031G22- CGTTGCGGAGACTGCTCAGACTGAACCTCAGGAACAGGACCAAGTTCAAGACTCTGAGGT
____________________________________________________________
consensus CGTTGCGGAGACTGCTCAGACTGAACCTCAGGAACAGGACCAAGTTCAAGACTCTGAGGT
. : . : . : . : . : . :
JMSF031G22- AGAGGACAATCAAGATGTTGCTCCGGGAAGTGATGATATTTCAAATGAGGCTGATACTAC
____________________________________________________________
consensus AGAGGACAATCAAGATGTTGCTCCGGGAAGTGATGATATTTCAAATGAGGCTGATACTAC
. : . : . : . : . : . :
JMSF031G22- AACTTCAGAGGAAACTGCTTCAATTGTTATGATGGCTTTGAAGTCATATAGAGATGCGTT
rJMSF007J05+ TTGAAGTCATATAGAGATGCGTT
____________________________________________________________
consensus AACTTCAGAGGAAACTGCTTCAATTGTTATGATGGCTTTGAAGTCATATAGAGATGCGTT
. : . : . : . : . : . :
JMSF031G22- GGATACTAATGACGAGTCTAAAATTGCAG
rJMSF007J05+ GGATACTAATGACGAGTCTAAAATTGCAGAATTAGAAGCTTTTCTCAAGTCTATAGAGGA
____________________________________________________________
consensus GGATACTAATGACGAGTCTAAAATTGCAGAATTAGAAGCTTTTCTCAAGTCTATAGAGGA
. : . : . : . : . : . :
rJMSF007J05+ TGAGAAAGTCAATCTTGAGAGAAAACTGCTGTTATTAACCGAAGAGCTCTCAAATGAGAA
____________________________________________________________
consensus TGAGAAAGTCAATCTTGAGAGAAAACTGCTGTTATTAACCGAAGAGCTCTCAAATGAGAA
. : . : . : . : . : . :
rJMSF007J05+ GGACCGAGTTCTTAGAATTAGTGCTGATTTTGACAATTTCCGGAAGAGAACTGAGAGGGA
____________________________________________________________
consensus GGACCGAGTTCTTAGAATTAGTGCTGATTTTGACAATTTCCGGAAGAGAACTGAGAGGGA
. : . : . : . : . : . :
rJMSF007J05+ ACGACTTTCTTCGTTTACAAATGCGCAAGGGGAAGTTGTTGAGAAACTTTTACCGGTGTT
rJMSF031G22+ GGGGAAGTTGNTGAGAAACTTTTACCGGTGTT
____________________________________________________________
consensus ACGACTTTCTTCGTTTACAAATGCGCAAGGGGAAGTTGTTGAGAAACTTTTACCGGTGTT
. : . : . : . : . : . :
rJMSF007J05+ GGATAACTTTGATAGAGCGAAAACCCAAATCAAGGTGGAAAGTGAGGGAGAGGAGAAAAT
rJMSF031G22+ GGATAACTTTGATAGAGCGAAAACCCAAATCAAGGTGGAAAGTGAGGGAGAGGAGAAAAT
____________________________________________________________
consensus GGATAACTTTGATAGAGCGAAAACCCAAATCAAGGTGGAAAGTGAGGGAGAGGAGAAAAT
. : . : . : . : . : . :
rJMSF033D06+ GTTTGTGGAAATTCTAGGATCTCTTGGTGT
rJMSF007J05+ CAATAACAGCTACCAGAGCATCTCTAAACAGTTTGTGGAAATTCTAGGATCTCTTGGTGT
rJMSF031G22+ CAATAACAGCTACCAGAGCATCTCTAAACAGTTTGTGGAAATTCTAGGATCTCTTGGTGT
____________________________________________________________
consensus CAATAACAGCTACCAGAGCATCTCTAAACAGTTTGTGGAAATTCTAGGATCTCTTGGTGT
. : . : . : . : . : . :
rJMSF033D06+ TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
rJMSF007J05+ TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
rJMSF031G22+ TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
____________________________________________________________
consensus TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
. : . : . : . : . : . :
rJMSF033D06+ CGAAGATTCNGTGGAATTCGATGAAGGNGTCATTATACAAGAATTTCGCANGGGTTTCCA
rJMSF007J05+ TGAAGATTCAGTGGAATTCGATGAAGGCGTCATTATACAAGAATTTCGCAAGGGTTTCCA
rJMSF031G22+ TGAAGATTCAGTGGAATTCGATGAAGGCGTCATTATACAAGAATTTCGCAAGGGTTTCCA
____________________________________________________________
consensus TGAAGATTCAGTGGAATTCGATGAAGGCGTCATTATACAAGAATTTCGCAAGGGTTTCCA
. : . : . : . : . : . :
rJMSF033D06+ ACTTGGAGAAAGANTCTTGCNCCCNTCAATGGCGANGGNNTGNGCTNNTCCTGGGCCNGC
rJMSF007J05+ ACTTGGAGAAAGACTCTTGCGCCCCTCAATGGTGAAGGTGTCTGCTGGTCCTGGGCCTGC
rJMSF031G22+ ACTTGGAGAAAGACTCTTGCGCCCCTCAATGGTGAAGGTGTCTGCTGGTCCTGGGCCTGC
____________________________________________________________
consensus ACTTGGAGAAAGACTCTTGCGCCCCTCAATGGTGAAGGTGTCTGCTGGTCCTGGGCCTGC
. : . : . : . : . : . :
rJMSF033D06+ AAAGCCGGAGNCATCGNACCNTGCAGACGAACAAGGNGGTTTTNTTGAGACAGCTGAGG
rJMSF007J05+ AAAGCCGGAGACATCGGACCCTGCAGAAGAACAAGGGGGTTTTATTGAGACAGCTGAGGA
rJMSF031G22+ AAAGCCGGAGACATCGGACCCTGCAGAAGAACAAGGGGGTTTTATTGAGACAGCTGAGGA
____________________________________________________________
consensus AAAGCCGGAGACATCGGACCCTGCAGAAGAACAAGGGGGTTTTATTGAGACAGCTGAGGA
. : . : . : . : . : . :
rJMSF007J05+ AGGTGGTAGTCAGCCAGAGGGTGCTAATGAGACTGGTTAGGAGAGTAACTCTATACAAGG
rJMSF031G22+ AGGTGGTAGTCAGCCAGAGGGTGCTAATGAGACTGGTTAGGAGAGTAACTCTATACAAGG
____________________________________________________________
consensus AGGTGGTAGTCAGCCAGAGGGTGCTAATGAGACTGGTTAGGAGAGTAACTCTATACAAGG
. : . : . : . : . : . :
rJMSF007J05+ CCCACCTTTATGACCAAAACAAAATTCACTTTTTCTTAAAATTTTGTATGAGTAAACCAA
rJMSF031G22+ CCCACCTTTATGACCAAAACAAAATTCACTTTTTCTTAAAATTTTGTATGAGTAAACCAA
____________________________________________________________
consensus CCCACCTTTATGACCAAAACAAAATTCACTTTTTCTTAAAATTTTGTATGAGTAAACCAA
. : . : . : . : . : . :
rJMSF007J05+ AATCCCTTGTAGCTATAAGTTGAGTTTTTGGTCTGTTTGAAGGGTTGATCTTT
rJMSF031G22+ AATCCCTTGTAGCTATAAGTTGAGTTTTTGGTCTGTTTGAAGGGTTGATCTTTGATGAGT
____________________________________________________________
consensus AATCCCTTGTAGCTATAAGTTGAGTTTTTGGTCTGTTTGAAGGGTTGATCTTTGATGAGT