Contig 007156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010I08Sequence260007156 (2)ref|XP_011082719.1|7e-44PREDICTED: ABC transporter I family member 17-like [Sesamum indicum]
JMSF031E01Sequence644002313 (5)ref|XP_004235874.1|1e-54PREDICTED: ABC transporter I family member 17 [Solanum lycopersicum]634007156 (2)ref|XP_010322648.1|2e-62PREDICTED: LOW QUALITY PROTEIN: ABC transporter I family member 17-like [Solanu

Alignment

This contig is upended


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rJMSF031E01+                                    CTTCGCTGCAAAGTCGGCATGCTCTTTCAGCTCC
                      ____________________________________________________________
consensus                                       CTTCGCTGCAAAGTCGGCATGCTCTTTCAGCTCC
 
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rJMSF031E01+          CTGCTCTCTTTGAAGGCACAGTTGCAGACAATATCAGATATGGGCCACTTTTAAGGGGGA
                      ____________________________________________________________
consensus             CTGCTCTCTTTGAAGGCACAGTTGCAGACAATATCAGATATGGGCCACTTTTAAGGGGGA
 
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rJMSF031E01+          AGAAGCTAAGTGATGATCAAGTCCTGAGATTGCTTAGTCTTGCAGACCTTGACTCCTCTT
                      ____________________________________________________________
consensus             AGAAGCTAAGTGATGATCAAGTCCTGAGATTGCTTAGTCTTGCAGACCTTGACTCCTCTT
 
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rJMSF031E01+          TCTGCAACAAGCCTGGTGGTGAACTGTCTGTTGGCCAAGCTCAGAGGGTTGCACTTGCTA
                      ____________________________________________________________
consensus             TCTGCAACAAGCCTGGTGGTGAACTGTCTGTTGGCCAAGCTCAGAGGGTTGCACTTGCTA
 
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rJMSF031E01+          GGACCTTAGCTAATGAGCCAGAGGTGAAGCTAGATTATGATGATGCAATTTTGCGGTTTA
                      ____________________________________________________________
consensus             GGACCTTAGCTAATGAGCCAGAGGTGAAGCTAGATTATGATGATGCAATTTTGCGGTTTA
 
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rJMSF010I08+                                                           AGGTTCTCCTG
rJMSF031E01+          ATGTATTTTGGCCTAACCCGAATGAAATCTTGTTCCATTTTTGAATTGAAGGTTCTCCTG
                      ____________________________________________________________
consensus             ATGTATTTTGGCCTAACCCGAATGAAATCTTGTTCCATTTTTGAATTGAAGGTTCTCCTG
 
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rJMSF010I08+          TTAGATGAGCCANCCAGTGCACTCGATCCNATATCGACACAGAATATTGAGGATGTTCTC
rJMSF031E01+          TTAGATGAGCCAACCAGTGCACTCGATCCAATATCGACACAGAATATTGAGGATGTTCTC
                      ____________________________________________________________
consensus             TTAGATGAGCCAACCAGTGCACTCGATCCAATATCGACACAGAATATTGAGGATGTTCTC
 
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rJMSF010I08+          GTCCGGTTGAAGAAGGAGAAGAGAATGACCATTGCAATGGTGTCTCACAGCATCAAGCAA
rJMSF031E01+          GTCCGGTTGAAGAAGGAGAAGAGAATGACCATTGCAATGGTGTCTCACAGCATCAAGCAA
                      ____________________________________________________________
consensus             GTCCGGTTGAAGAAGGAGAAGAGAATGACCATTGCAATGGTGTCTCACAGCATCAAGCAA
 
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rJMSF010I08+          ATNCAGAGAATAGCTGATGTGGTCTGCCTTCTTGTTGAGGGTGAGATTGTGGAGGTTCTG
rJMSF031E01+          ATACAGAGAATAGCTGATGTGGTCTGCCTTCTTGTTGAGGGTGAGATTGTGGAGGTTCTG
                      ____________________________________________________________
consensus             ATACAGAGAATAGCTGATGTGGTCTGCCTTCTTGTTGAGGGTGAGATTGTGGAGGTTCTG
 
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rJMSF010I08+          AAGCCTGATCAGCTCTCTCAAGCTAAGCATCCCATGGCACAAAGGTTTNTTCAA      
rJMSF031E01+          AAGCCTGATCAGCTCTCTCAAGCTAAGCATCCCATGGCACAAAGGTTTCTTCAACTAAGC
                      ____________________________________________________________
consensus             AAGCCTGATCAGCTCTCTCAAGCTAAGCATCCCATGGCACAAAGGTTTCTTCAACTAAGC
 
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rJMSF031E01+          TCATAGTTTTCTTTTGGTATGTATTGTGTGTTTATTATGTACGAAGGAAACAAAAACACT
                      ____________________________________________________________
consensus             TCATAGTTTTCTTTTGGTATGTATTGTGTGTTTATTATGTACGAAGGAAACAAAAACACT