Contig 007149:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN044C12Sequence573007149 (5)ref|XP_006353730.1|132PREDICTED: uncharacterized protein LOC102603191 [Solanum tuberosum]
JMSF024O10Sequence641007149 (5)ref|XP_006353730.1|138PREDICTED: uncharacterized protein LOC102603191 [Solanum tuberosum]600007149 (5)ref|XP_006353730.1|138PREDICTED: uncharacterized protein LOC102603191 [Solanum tuberosum]
JMSF030F22Sequence647007149 (5)ref|XP_006353730.1|139PREDICTED: uncharacterized protein LOC102603191 [Solanum tuberosum]679007149 (5)ref|XP_006353730.1|138PREDICTED: uncharacterized protein LOC102603191 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF024O10+                                                       TGATTTCCAACTCTC
JMSF030F22-                                         GGAGTCTGTATTTGCTGATTTCCAACTCTC
JMSF024O10-                                                        TGATTTCCAACTCTC
                      ____________________________________________________________
consensus                                           GGAGTCTGTATTTGCTGATTTCCAACTCTC
 
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rJMSF024O10+          TCTACACTCTCGACTCCACTCCGCGAACTCAACAGATCTCCCTCTGATGGCGGCGGCGGA
JMSF030F22-           TCTACACTCTCGACTCCACTCCGCGAACTCAACAGATCTCCCTCTGATGGCGGCGGCGGA
JMSF024O10-           TCTACACTCTCGACTCCACTCCGCGAACTCAACAGATCTCCCTCTGATGGCGGCGGCGGA
rJMSF030F22+                                                      TGATGGCGGCGGCGGA
                      ____________________________________________________________
consensus             TCTACACTCTCGACTCCACTCCGCGAACTCAACAGATCTCCCTCTGATGGCGGCGGCGGA
 
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rJMSF024O10+          CTGTCACAGCGGCGGTGGCGCACCCCTGGTGATGGTGGTAGAGTACTTGGAGACCACCAT
JMSF030F22-           CTGTCACAGCGGCGGTGGCGCACCCCTGGTGATGGTGGTAGAGTACTTGGAGACCACCAT
JMSF024O10-           CTGTCACAGCGGCGGTGGCGCACCCCTGGTGATGGTGGTAGAGTACTTGGAGACCACCAT
JMFN044C12+                                  CCCTGGTGATGGTGGTAGAGTACTTGGAGACCACCAT
rJMSF030F22+          CTGTCACAGCGGCGGTGGCGCACCCCTGGTGATGGTGGTAGAGTACTTGGAGACCACCAT
                      ____________________________________________________________
consensus             CTGTCACAGCGGCGGTGGCGCACCCCTGGTGATGGTGGTAGAGTACTTGGAGACCACCAT
 
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rJMSF024O10+          GTCGAGAGATCTACTCTGCAAGTTTCCGGACAACTCCGCCTTCGACTTCGACTACTCTCA
JMSF030F22-           GTCGAGAGATCTACTCTGCAAGTTTCCGGACAACTCCGCCTTCGACTTCGACTACTCTCA
JMSF024O10-           GTCGAGAGATCTACTCTGCAAGTTTCCGGACAACTCCGCCTTCGACTTCGACTACTCTCA
JMFN044C12+           GTCGAGAGATCTACTCTGCAAGTTTCCGGACAACTCCGCCTTCGACTTCGACTACTCTCA
rJMSF030F22+          GTCGAGAGATCTACTCTGCAAGTTTCCGGACAACTCCGCCTTCGACTTCGACTACTCTCA
                      ____________________________________________________________
consensus             GTCGAGAGATCTACTCTGCAAGTTTCCGGACAACTCCGCCTTCGACTTCGACTACTCTCA
 
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rJMSF024O10+          GAGCGCAATCTGGTCCCCCATGGTGGCCCGCCCCCTGATCCCCGTCTCCGGCCGCGGCAA
JMSF030F22-           GAGCGCAATCTGGTCCCCCATGGTGGCCCGCCCCCTGATCCCCGTCTCCGGCCGCGGCAA
JMSF024O10-           GAGCGCAATCTGGTCCCCCATGGTGGCCCGCCCCCTGATCCCCGTCTCCGGCCGCGGCAA
JMFN044C12+           GAGCGCAATCTGGTCCCCCATGGTGGCCCGCCCCCTGATCCCCGTCTCCGGCCGCGGCAA
rJMSF030F22+          GAGCGCAATCTGGTCCCCCATGGTGGCCCGCCCCCTGATCCCCGTCTCCGGCCGCGGCAA
                      ____________________________________________________________
consensus             GAGCGCAATCTGGTCCCCCATGGTGGCCCGCCCCCTGATCCCCGTCTCCGGCCGCGGCAA
 
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rJMSF024O10+          TCTCGGCTCCGGCCTCCGGAGAAAGCTGACGTACGCGGAAACCAGGACCAATTTCAAGGA
JMSF030F22-           TCTCGGCTCCGGCCTCCGGAGAAAGCTGACGTACGCGGAAACCAGGACCAATTTCAAGGA
JMSF024O10-           TCTCGGCTCCGGCCTCCGGAGAAAGCTGACGTACGCGGAAACCAGGACCAATTTCAAGGA
JMFN044C12+           TCTCGGCTCCGGCCTCCGGAGAAAGCTGACGTACGCGGAAACCAGGACCAGTTTCAAGGA
rJMSF030F22+          TCTCGGCTCCGGCCTCCGGAGAAAGCTGACGTACGCGGAAACCAGGACCAATTTCAAGGA
                      ____________________________________________________________
consensus             TCTCGGCTCCGGCCTCCGGAGAAAGCTGACGTACGCGGAAACCAGGACCAATTTCAAGGA
 
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rJMSF024O10+          AGTGACGGCCAAATTCAAGAGGAAGTTTCTAGATGCCGTGTCCTGCAATGTCCGTTATCA
JMSF030F22-           AGTGACGGCCAAATTCAAGAGGAAGTTTCTAGATGCCGTGTCCTGCAATGTCCGTTATCA
JMSF024O10-           AGTGACGGCCAAATTCAAGAGGAAGTTTCTAGATGCCGTGTCCTGCAATGTCCGTTATCA
JMFN044C12+           AGTGACGGCCAAATTCAAGAGGAAGTTTCTAGATGCCGTGTCCTGCAATGTCCGTTATCA
rJMSF030F22+          AGTGACGGCCAAATTCAAGAGGAAGTTTCTAGATGCCGTGTCCTGCAATGTCCGTTATCA
                      ____________________________________________________________
consensus             AGTGACGGCCAAATTCAAGAGGAAGTTTCTAGATGCCGTGTCCTGCAATGTCCGTTATCA
 
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rJMSF024O10+          ACAGTTGAAGAAGAGGAAGAAGAGGGATTTTGATTTCTCTCCGATCCCTTCTTCTTCTAA
JMSF030F22-           ACAGTTGAAGAAGAGGAAGAAGAGGGATTTTGATTTCTCTCCGATCCCTTCTTCTTCTAA
JMSF024O10-           ACAGTTGAAGAAGAGGAAGAAGAGGGATTTTGATTTCTCTCCGATCCCTTCTTCTTCTAA
JMFN044C12+           ACAGTTGAAGAAGAGGAAGAAGAGGGATTTTGATTTCTCTCCAATCCCTTCTTCTTCTAA
rJMSF030F22+          ACAGTTGAAGAAGAGGAAGAAGAGGGATTTTGATTTCTCTCCGATCCCTTCTTCTTCTAA
                      ____________________________________________________________
consensus             ACAGTTGAAGAAGAGGAAGAAGAGGGATTTTGATTTCTCTCCGATCCCTTCTTCTTCTAA
 
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rJMSF024O10+          GCTCACAAATACTCCACGAAAGGGATGGGCAAAGGTATTGAAAGCTGCTTCAAAGAATTT
JMSF030F22-           GCTCACAAATACTCCACGAAAGGGATGGGCAAAGGTATTGAAAGCTGCTTCAAAGAATTT
JMSF024O10-           GCTCACAAATACTCCACGAAAGGGATGGGCAAAGGTATTGAAAGCTGCTTCAAAGAATTT
JMFN044C12+           GCTCACAAATACTCCACGAAAGGGATGGGCAAAGGTATTGAAAGCTGCTTCAAAGAATTT
rJMSF030F22+          GCTCACAAATACTCCACGAAAGGGATGGGCAAAGGTATTGAAAGCTGCTTCAAAGAATTT
                      ____________________________________________________________
consensus             GCTCACAAATACTCCACGAAAGGGATGGGCAAAGGTATTGAAAGCTGCTTCAAAGAATTT
 
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rJMSF024O10+          CAAGAAGAGCAAGAAGAAACCTCAAATAATGTGACTTCGTCCTCTATTTAAATTATTATG
JMSF030F22-           CAAGAAGAGCAAGAAGAAACCTCAAATAATGTGACTTCGTCCTCTATTTAAATTATTATG
JMSF024O10-           CAAGAAGAGCAAGAAGAAACCTCAAATAATGTGACTTCGTCCTCTATTTAAATTATTATG
JMFN044C12+           CAAGAAGAGCAAGAAGAAACCTCAAATAATGTGACTTCGTCCTCTATTTAAATTATTATG
rJMSF030F22+          CAAGAAGAGCAAGAAGAAACCTCAAATAATGTGACTTCGTCCTCTATTTAAATTATTATG
                      ____________________________________________________________
consensus             CAAGAAGAGCAAGAAGAAACCTCAAATAATGTGACTTCGTCCTCTATTTAAATTATTATG
 
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rJMSF024O10+          TGTACTATTACCCACGATGTTAATGGGATTTGTAATTTGAGTC                 
JMSF030F22-           TGTACTATTACCCACGATGTTAATGGGATTTGTAATTTGAGTCACATGTATTTTCAATCA
JMSF024O10-           TGTACTATTACCCACGATGTTAATGGGATTTGTAATTTGAGTCACATGTATTTTCAATCA
JMFN044C12+           TGTACTATTACCCACGATGTTAATGGGATTTGTAATTTGAGTCACATGTATTTTCAATCA
rJMSF030F22+          TGTACTATTACCCACGATGTTAATGGGATTTGTAATTTGAGTCACATGTATTTTCAATCA
                      ____________________________________________________________
consensus             TGTACTATTACCCACGATGTTAATGGGATTTGTAATTTGAGTCACATGTATTTTCAATCA
 
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JMSF030F22-           ATCCCATGAGGCTTTGT                                           
JMSF024O10-           ATCCCATGAGGCTTTGT                                           
JMFN044C12+           ATCCCATGAGGCTTTGTTTATT                                      
rJMSF030F22+          ATCCCATGAGGCTTTGTTTATTAATGCAATATTCTCTAATTATTTTTTGTCAATTCATGA
                      ____________________________________________________________
consensus             ATCCCATGAGGCTTTGTTTATTAATGCAATATTCTCTAATTATTTTTTGTCAATTCATGA
 
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rJMSF030F22+          GGTGTTCTGAACCGTCTTAAACGGGGTAGGATGTACCTTTTAAGCTCGTACCCACTCAGA
                      ____________________________________________________________
consensus             GGTGTTCTGAACCGTCTTAAACGGGGTAGGATGTACCTTTTAAGCTCGTACCCACTCAGA