Contig 007147:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN010I19Sequence627007147 (2)ref|XP_009595332.1|1e-70PREDICTED: nudix hydrolase 1 [Nicotiana tomentosiformis]
JMSF029M16Sequence687014693emb|CDP00554.1|2e-09unnamed protein product [Coffea canephora]731007147 (2)ref|XP_009595332.1|5e-48PREDICTED: nudix hydrolase 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-                                    TCCGTTGCTTTTATCGATTTTGGACAGTCAACAAT
                      ____________________________________________________________
consensus                                      TCCGTTGCTTTTATCGATTTTGGACAGTCAACAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           GACCTGCAAAATGGAAAATGGCGACGCATCGCCGCCGTCGCCACCGCCGGTGCCTAAGGT
                      ____________________________________________________________
consensus             GACCTGCAAAATGGAAAATGGCGACGCATCGCCGCCGTCGCCACCGCCGGTGCCTAAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           AGGGGTGGCGGTGTTTTTATTAAATGGAAATAAGGTGCTGTTAGGCCGTCGCCTCTCTTC
                      ____________________________________________________________
consensus             AGGGGTGGCGGTGTTTTTATTAAATGGAAATAAGGTGCTGTTAGGCCGTCGCCTCTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           CATCGGCTACAACACCTTCGCCCTCCCCGGCGGACACCTAGAGTTCGGAGAAAGTTTTGA
rJMSF029M16+                                                        GGAGAAAGTTTTGA
                      ____________________________________________________________
consensus             CATCGGCTACAACACCTTCGCCCTCCCCGGCGGACACCTAGAGTTCGGAGAAAGTTTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           AGAATGTGCAGCCAGGGAGGTGAAGGAGGAGACCGGATTGGATATTGATAAAACCGAGCT
rJMSF029M16+          AGAATGTGCAGCCAGGGAGGTGAAGGAGGAGACCGGATTGGATATTGATAAAACCGAGCT
                      ____________________________________________________________
consensus             AGAATGTGCAGCCAGGGAGGTGAAGGAGGAGACCGGATTGGATATTGATAAAACCGAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           CTTAACAGTTGTCAACAATGTGATCACAGAGAAAGTGCACGTTGTTTGCGTCCTATTACG
rJMSF029M16+          CTTAACAGTTGTCAACAATGTGATCACAGAGAAAGTGCACGTTGTTTGCGTCCTATTACG
                      ____________________________________________________________
consensus             CTTAACAGTTGTCAACAATGTGATCACAGAGAAAGTGCACGTTGTTTGCGTCCTATTACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           AGCAATCCTGGTTGATCCTGCTCAGGTTCCGCAAAATCTTGAGCCTGAGAAGTGTGGTGG
rJMSF029M16+          AGCAATCCTGGTTGATCCTGCTCAGGTTCCGCAAAATCTTGAGCCTGAGAAGTGTGGTGG
                      ____________________________________________________________
consensus             AGCAATCCTGGTTGATCCTGCTCAGGTTCCGCAAAATCTTGAGCCTGAGAAGTGTGGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           TTGGGAATGGTATGATTGGAACGAGCTCCCAAAGCCACTCTTTGGACCTTTGGAGGATGT
rJMSF029M16+          TTGGGAATGGTATGATTGGAACGAGCTCCCAAAGCCACTCTTTGGACCTTTGGAGGATGT
                      ____________________________________________________________
consensus             TTGGGAATGGTATGATTGGAACGAGCTCCCAAAGCCACTCTTTGGACCTTTGGAGGATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           GGTTCAGGCTGGGTTTAATCCATTCCCTACAAACTAAAACCATTTCCTTAGATTATCGCA
rJMSF029M16+          GGTTCAGGCTGGGTTTAATCCATTCCCTACAAACTAAAACCATTTCCTTAGATTATCGCA
                      ____________________________________________________________
consensus             GGTTCAGGCTGGGTTTAATCCATTCCCTACAAACTAAAACCATTTCCTTAGATTATCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           GATTTTCAGACGGATCAAACCTCCATTTGCTGCTGCAAATGAAAATGGAAAATCACATAT
rJMSF029M16+          GATTTTCAGACGGATCAAACCTCCATTTGCTGCTGCAAATGAAAATGGAAAATCACATAT
                      ____________________________________________________________
consensus             GATTTTCAGACGGATCAAACCTCCATTTGCTGCTGCAAATGAAAATGGAAAATCACATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN010I19-           CAATGTTCGGGTGTAAAACTAAAAAGCACGATCCATTTATTATCATGTTCGT        
rJMSF029M16+          CAATGTTCGGGTGTAAAACTAAAAAGCACGATCCATTTATTATCATGTTCGTAGTCTCCA
                      ____________________________________________________________
consensus             CAATGTTCGGGTGTAAAACTAAAAAGCACGATCCATTTATTATCATGTTCGTAGTCTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029M16+          ATCTATTCGGGAAAAAATTTATGAAAACTAATATTATGTACACTCTGATTTAATTTGTAG
                      ____________________________________________________________
consensus             ATCTATTCGGGAAAAAATTTATGAAAACTAATATTATGTACACTCTGATTTAATTTGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029M16+          CCTATCTAGTTTAGTATTTAGGTGGATCCACTTTGCTGGTTGCTACAAGTATTTTGCTGT
                      ____________________________________________________________
consensus             CCTATCTAGTTTAGTATTTAGGTGGATCCACTTTGCTGGTTGCTACAAGTATTTTGCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029M16+          GGGTATAGTTTATGTTTCTGTGTATATGTTTGAATTGTTCACTACCAAGATTCCATGTAT
                      ____________________________________________________________
consensus             GGGTATAGTTTATGTTTCTGTGTATATGTTTGAATTGTTCACTACCAAGATTCCATGTAT