Contig 007136:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF015A10-                                                 TCTTTCGCCGACCCCCCAACCC
JMSF027I15-                                               GATCTTTCGCCGACCCCCCAACCC
                      ____________________________________________________________
consensus                                                 GATCTTTCGCCGACCCCCCAACCC
 
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JMSF015A10-           CCTTCTCCTCTATCCCACAACGCACGCAAAGTAGCAGAAGCGAAG------GAGAGAGAG
JMSF027I15-           CCTTCTCCTCTATCCCACAACGCACGCAAAGTAGCAGAAGCGAAGGAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             CCTTCTCCTCTATCCCACAACGCACGCAAAGTAGCAGAAGCGAAGGAGAGAGAGAGAGAG
 
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JMSF015A10-           AGAGAGGAGAGAGGAGAGAGGGGTGGGGCTTCACTTTCCCAATTATTCCATCTTCAGTTC
JMSF027I15-           AGAGAGGAGAGAGGAGAGAGGGGTGGGGCTTCACTTTCCCAATTATTCCATCTTCAGTTC
                      ____________________________________________________________
consensus             AGAGAGGAGAGAGGAGAGAGGGGTGGGGCTTCACTTTCCCAATTATTCCATCTTCAGTTC
 
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JMSF015A10-           AACCCAATCATATTCATCTTCTTCAGTAAGAGCAAAAATGAACTCCAGACCTAGTGAGAG
JMSF027I15-           AACCCAATCATATTCATCTTCTTCAGTAAGAGCAAAAATGAACTCCAGACCTAGTGAGAG
                      ____________________________________________________________
consensus             AACCCAATCATATTCATCTTCTTCAGTAAGAGCAAAAATGAACTCCAGACCTAGTGAGAG
 
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JMSF015A10-           CACCAATGGCCGCATCCCTCACCCGCCGCTTCCGAGCCACCATCACTACT          
JMSF027I15-           CACCAATGGCCGCATCCCTCACCCGCCGCTTCCGAGCCACCATCACTACTACCCGCCTCC
                      ____________________________________________________________
consensus             CACCAATGGCCGCATCCCTCACCCGCCGCTTCCGAGCCACCATCACTACTACCCGCCTCC
 
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JMSF027I15-           ACATTCCTCCTCTTCCTCCTCCAAGGCTTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCT
rJMSF015A10+                                     TTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCT
                      ____________________________________________________________
consensus             ACATTCCTCCTCTTCCTCCTCCAAGGCTTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCT
 
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JMSF027I15-           CCTCTTCACTTTCATGGCGTTGCTAGTCATTGCCGTCATTCTCGTTATTGTTCTCGCTCT
rJMSF015A10+          CCTCTTCACTTTCATGGCGTTGCTAGTCATNGCCGTCATTCTCGTTATTGTTCTCGCTCT
rJMSF027I15+              TTCACTTTCATGGCGGTGCTAGTCATNGCCGTCATTCTCGTTATTGNTCTCGCTCT
                      ____________________________________________________________
consensus             CCTCTTCACTTTCATGGCGTTGCTAGTCATTGCCGTCATTCTCGTTATTGTTCTCGCTCT
 
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JMSF027I15-           CAAGCCTAAGAAACCCCAATTTGATCTCCAGCAAGTTGGAGTCCAGTACGTCGGCATCTC
rJMSF015A10+          CAAGCCTAAGAAACCCCAATTTGATCTCCAGCAAGTTGGAGTCCAGTACGTCGGCATCTC
rJMSF027I15+          CAAGCCTAAGAAACCCCAATTTGATCTCCAGCAAGTTGGAGTCCAGTACGTCGGCATCTC
                      ____________________________________________________________
consensus             CAAGCCTAAGAAACCCCAATTTGATCTCCAGCAAGTTGGAGTCCAGTACGTCGGCATCTC
 
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JMSF027I15-           CTCCACCTCCGCCGCCGCCGCCGCGGCCTCCGCCTCCTTCTCCCTCAACATCCGCATGGT
rJMSF015A10+          CTCCACCTCCGCCGCCGCCGCCGCGGCCTCCGCCTCCTTCTCCCTCAACATCCGCATGGT
rJMSF027I15+          CTCCACCTCCGCCGCCGCCGCCGCGGCNTCCGCCTCCTTCTCCCTCAACATCCGCATGGT
                      ____________________________________________________________
consensus             CTCCACCTCCGCCGCCGCCGCCGCGGCCTCCGCCTCCTTCTCCCTCAACATCCGCATGGT
 
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JMSF027I15-           GTTCGCCGCCGCCAACGACAACNAGGTCGGAATCAAGTACGACGAGGCCCGATTCACCAT
rJMSF015A10+          GTTCGCCGCCGCCAACGACAACAAGGTCGGAATCAAGTACGACGAGGCCCGATTCACCAT
rJMSF027I15+          GTTCGCCGCCGCCAACGACAACAAGGTCGGAATCAAGTACGACGAGGCCCGATTCACCAT
                      ____________________________________________________________
consensus             GTTCGCCGCCGCCAACGACAACAAGGTCGGAATCAAGTACGACGAGGCCCGATTCACCAT
 
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JMSF027I15-           CATGTACCGCGGAATTCCACTGGGGCGGGGCATCGTCCCCGCTTTCTACCAGCCCGCCCA
rJMSF015A10+          CATGTACCGCGGAATTCCACTGGGGCGGGGCATCGTCCCCGCTTTCTACCAGCCCGCCCA
rJMSF027I15+          CATGTACCGCGGAATTCCACTGGGGCGGGGCATCGTCCCCGCTTTCTACCAGCCCGCCCA
                      ____________________________________________________________
consensus             CATGTACCGCGGAATTCCACTGGGGCGGGGCATCGTCCCCGCTTTCTACCAGCCCGCCCA
 
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JMSF027I15-           CAGTATCCGCCGGGTCCAGACCACCATCGTCGTGGAT                       
rJMSF015A10+          CAGTATCCGCCGGGTCCAGACCACCATCGTCGTGGATCGGGTCAGCTTGCTCCAAACTGA
rJMSF027I15+          CAGTATCCGCCGGGTCCAGACCACCATCGTCGTGGATCGGGTCAGCTTGCTCCAAACTGA
                      ____________________________________________________________
consensus             CAGTATCCGCCGGGTCCAGACCACCATCGTCGTGGATCGGGTCAGCTTGCTCCAAACTGA
 
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rJMSF015A10+          TGGCGATGCTTTGCTCCGCGACGCTACGGTTAACGACCGGGTCGAGTTGCGGGTCCTCGG
rJMSF027I15+          TGGCGATGCTTTGCTCCGCGACGCTACGGTTAACGACCGGGTCGAGTTGCGGGTCCTCGG
                      ____________________________________________________________
consensus             TGGCGATGCTTTGCTCCGCGACGCTACGGTTAACGACCGGGTCGAGTTGCGGGTCCTCGG
 
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rJMSF015A10+          CGATGTCGGCGCCAAAATCCGGATTCTCGGGTTCACTTCTCCCGGGGTCGAGGTGTCTGT
rJMSF027I15+          CGATGTCGGCGCCAAAATCCGGATTCTCGGGTTCACTTCTCCCGGGGTCGAGGTGTCTGT
                      ____________________________________________________________
consensus             CGATGTCGGCGCCAAAATCCGGATTCTCGGGTTCACTTCTCCCGGGGTCGAGGTGTCTGT
 
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rJMSF015A10+          GGATTGCACGATAGCAATCAGCCCAAGAAAACAAGCTCTCACATACAAGCAGTGTGGTTT
rJMSF027I15+          GGATTGCACGATAGCAATCAGCCCAAGAAAACAAGCTCTCACATACAAGCAGTGTGGTTT
                      ____________________________________________________________
consensus             GGATTGCACGATAGCAATCAGCCCAAGAAAACAAGCTCTCACATACAAGCAGTGTGGTTT
 
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rJMSF015A10+          TGATGGATTAAGTGTATGAATATGGCCTACAGTTACTTCTTCATTACACTCTCCTCTCTT
rJMSF027I15+          TGATGGATTAAGTGTATGAATATGGCCTACAGTTACTTCTTCATTACACTCTCCTCTCTT
                      ____________________________________________________________
consensus             TGATGGATTAAGTGTATGAATATGGCCTACAGTTACTTCTTCATTACACTCTCCTCTCTT
 
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rJMSF015A10+          GCTCCCAAGGATAGATAGAGAGAGAGAGAGGGGCTGAGCGTTTTTGCCCTCAGTCGCAGA
rJMSF028I15+          GCTCCCAAGGATANATAGAGAGAGAGAGAGGGGNTGAGCGTTTTTGCCCTCAGTCGCAGA
rJMSF027I15+          GCTCCCAAGGATAGATAGAGAGAGAGAGAGGGGCTGAGCGTTTTTGCCCTCAGTCGCAGA
                      ____________________________________________________________
consensus             GCTCCCAAGGATAGATAGAGAGAGAGAGAGGGGCTGAGCGTTTTTGCCCTCAGTCGCAGA
 
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rJMSF015A10+          TGGTAATAGATGCAGTGTTGCCTGGAAGATTAATCGGTCAGCCACAAATTGTATTTAAT 
rJMSF028I15+          TCGTAATAGANGCAGTGTTNCCTGGAAGANTAATCGGTCAGCCACAAATNGTATTTAAT 
rJMSF027I15+          TGGTAATAGATGCAGTGTTGCCTGGAAGATTAATCGGTCAGCCACAAATTGTATTTAATT
                      ____________________________________________________________
consensus             TGGTAATAGATGCAGTGTTGCCTGGAAGATTAATCGGTCAGCCACAAATTGTATTTAATT
 
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rJMSF027I15+          GAGTTTATGTATAACACCATTTTCGGGAAATTTTGATTTTGATCCTCGTGAAAGCGTGGA
                      ____________________________________________________________
consensus             GAGTTTATGTATAACACCATTTTCGGGAAATTTTGATTTTGATCCTCGTGAAAGCGTGGA