Contig 007132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026O02Sequence659007132 (2)ref|XP_008235492.1|3e-84PREDICTED: desumoylating isopeptidase 1 [Prunus mume]709007132 (2)gb|EYU46335.1|1e-66hypothetical protein MIMGU_mgv1a012018mg [Erythranthe guttata] gb|EYU46336.1| hy

Alignment

This contig is upended


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JMSF026O02-                 GAGCAGATCTTATACTTCGTCGCAGCTTCTTCACCCATTCGCGAACTTTCGATT
                      ____________________________________________________________
consensus                   GAGCAGATCTTATACTTCGTCGCAGCTTCTTCACCCATTCGCGAACTTTCGATT
 
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JMSF026O02-           TCAGGATTTCCTTCACCTATAACTCTTTTAGAATTTCCTTCTCCTATAACTCTTCATCCT
                      ____________________________________________________________
consensus             TCAGGATTTCCTTCACCTATAACTCTTTTAGAATTTCCTTCTCCTATAACTCTTCATCCT
 
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JMSF026O02-           TCTTCGGCTCGATCAATCGCTTGAAGGTCTTCATAGTTGTTGCAGTTCATTCTGCCAGCC
                      ____________________________________________________________
consensus             TCTTCGGCTCGATCAATCGCTTGAAGGTCTTCATAGTTGTTGCAGTTCATTCTGCCAGCC
 
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JMSF026O02-           CATCCATCAGCTCCTTTTACAGTGTTTTTCCTGCTAACTGACCTGATTTCAAGAAATTCT
                      ____________________________________________________________
consensus             CATCCATCAGCTCCTTTTACAGTGTTTTTCCTGCTAACTGACCTGATTTCAAGAAATTCT
 
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JMSF026O02-           TTTATATCGGAGTGTCGGAGATGGCTGAGGAGGGACACACGGTCTTGTTGAATGTGTATG
                      ____________________________________________________________
consensus             TTTATATCGGAGTGTCGGAGATGGCTGAGGAGGGACACACGGTCTTGTTGAATGTGTATG
 
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JMSF026O02-           ACTTAAGCCAAGGATTAGCTCGCCAGATGTCTGCTGCATTCTTGGGCAAAACCATTGAAG
                      ____________________________________________________________
consensus             ACTTAAGCCAAGGATTAGCTCGCCAGATGTCTGCTGCATTCTTGGGCAAAACCATTGAAG
 
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JMSF026O02-           GCATATGGCACACTGGAGTAGTTGTTTATGGTAATGAATATTATTTTGGCGGCGGGATAC
                      ____________________________________________________________
consensus             GCATATGGCACACTGGAGTAGTTGTTTATGGTAATGAATATTATTTTGGCGGCGGGATAC
 
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JMSF026O02-           AACATGCTCCTGTGGGTACTACACCCTATGGGACTCCTATTCGAGTTGTGGAACTCGGTG
                      ____________________________________________________________
consensus             AACATGCTCCTGTGGGTACTACACCCTATGGGACTCCTATTCGAGTTGTGGAACTCGGTG
 
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JMSF026O02-           TCACACATCTTCCAAAGGATGTTTTTGAATCATATTTGCAGGAGATTAGCCCCCGTTACA
rJMSF026O02+                        AAGGATGTTTTTGAATCATATTTGCAGGAGATTAGCCCCCGTTACN
                      ____________________________________________________________
consensus             TCACACATCTTCCAAAGGATGTTTTTGAATCATATTTGCAGGAGATTAGCCCCCGTTACA
 
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JMSF026O02-           CTGCAGAGACCTATAGTTTACTGACCCATAACTGCAATAATTTCAGCAATGAGGTCGCTC
rJMSF026O02+          CTGCAGAGACCTATAGTTTACTGACCCATAACTGCAATAATTTCAGCAATGAGGTCGCTC
                      ____________________________________________________________
consensus             CTGCAGAGACCTATAGTTTACTGACCCATAACTGCAATAATTTCAGCAATGAGGTCGCTC
 
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JMSF026O02-           AGTTTTTGGTGGGTGCAACCATTCCAGAATATATTCTGAACCTTCCTAATGAGGTCATGA
rJMSF026O02+          NGTTTTTGGTGGGTGCNACCNTTCCAGAATATATTTTGAACCTTCCTAATGAGGTCNTGA
                      ____________________________________________________________
consensus             AGTTTTTGGTGGGTGCAACCATTCCAGAATATATTTTGAACCTTCCTAATGAGGTCATGA
 
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JMSF026O02-           GC                                                          
rJMSF026O02+          GCNGCCCNATGGGTGCTNTCATGTTGCCNATGATNCAACNGATGGNGGNTACNTTAAGGG
                      ____________________________________________________________
consensus             GCNGCCCNATGGGTGCTNTCATGTTGCCNATGATNCAACNGATGGNGGNTACNTTAAGGG
 
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rJMSF026O02+          TTGGTGCAGTTCCTCAAGCTCCTGTNTTCAAACCTTCAACAACAGCTCCTNTTGCTTNCC
                      ____________________________________________________________
consensus             TTGGTGCAGTTCCTCAAGCTCCTGTNTTCAAACCTTCAACAACAGCTCCTNTTGCTTNCC
 
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rJMSF026O02+          NTTNGGGAAGCNACNAGAGTGTNTNGGAAGACNCNATAAAAGAGGGTGTTGATTNGGGAT
                      ____________________________________________________________
consensus             NTTNGGGAAGCNACNAGAGTGTNTNGGAAGACNCNATAAAAGAGGGTGTTGATTNGGGAT
 
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rJMSF026O02+          NGGGAGTGAAAAATGGAAAGAGCGATGAAGTTGCNGGTGCNGTCAATCCTGTGGATCCTT
                      ____________________________________________________________
consensus             NGGGAGTGAAAAATGGAAAGAGCGATGAAGTTGCNGGTGCNGTCAATCCTGTGGATCCTT
 
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rJMSF026O02+          TGGGAGACNCCCGGAGCNAGATNCAAGGGGAGATCCCTAGAGAGTTTGCTGCAATTATGG
                      ____________________________________________________________
consensus             TGGGAGACNCCCGGAGCNAGATNCAAGGGGAGATCCCTAGAGAGTTTGCTGCAATTATGG
 
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rJMSF026O02+          CNACCGGGACNTTGCGTGCAAGTGAGGNTGCGGCNTTGGCAACTAAAAGAGTCNTGCAAA
                      ____________________________________________________________
consensus             CNACCGGGACNTTGCGTGCAAGTGAGGNTGCGGCNTTGGCAACTAAAAGAGTCNTGCAAA
 
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rJMSF026O02+          GATATGGGCNCCCNAGTGTTGCNCAGAGTTGAGATAAAAACTGAATTACNTTATATTTGT
                      ____________________________________________________________
consensus             GATATGGGCNCCCNAGTGTTGCNCAGAGTTGAGATAAAAACTGAATTACNTTATATTTGT
 
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rJMSF026O02+          TGTGTGTATTACNTTACNTNTAATCCTTGGTCGTCGGAGGAAAATGGCTTCCCCCTTGGG
                      ____________________________________________________________
consensus             TGTGTGTATTACNTTACNTNTAATCCTTGGTCGTCGGAGGAAAATGGCTTCCCCCTTGGG
 
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rJMSF026O02+          TTTATGTTATCTTAGCGATTTTAATATTTAATTTGAAATGTATTACGNGACTTCAATTGG
                      ____________________________________________________________
consensus             TTTATGTTATCTTAGCGATTTTAATATTTAATTTGAAATGTATTACGNGACTTCAATTGG