| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003I24 | Sequence | 273 | 009337 (3) | gb|AFK39154.1| | 3e-18 | unknown [Lotus japonicus] | 532 | 007130 (3) | ref|XP_011008292.1| | 3e-26 | PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like [Populus |
| JMSF024O05 | Sequence | 660 | 009337 (3) | ref|XP_006354953.1| | 4e-50 | PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like [Solanum | 672 | 007130 (3) | ref|XP_004236775.1| | 3e-43 | PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase isoform X3 [So |
| JMSF026L12 | Sequence | 675 | 009337 (3) | ref|XP_006354953.1| | 2e-50 | PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like [Solanum | 751 | 007130 (3) | ref|XP_004236775.1| | 9e-52 | PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase isoform X3 [So |
This contig is upended
. : . : . : . : . : . :
rJMSF024O05+ TTCAAAAGGAGCAATTTCATGAACTTGTTTTA
rJMSF026L12+ TCAAAAGGAGCAATTTCATGAACTTGTTTTA
____________________________________________________________
consensus TTCAAAAGGAGCAATTTCATGAACTTGTTTTA
. : . : . : . : . : . :
rJMSF024O05+ GGGCTTGAACTCACCGGCCTACCGTTTNTGGTCGCCGTCAGGCCNCCGGAGGGATCATCG
rJMSF026L12+ GGGCTTGAACTCACCGGCCTACCGTTTCTGGTCGCCATCAAGCCGCCGGAGGGATCATCG
____________________________________________________________
consensus GGGCTTGAACTCACCGGCCTACCGTTTCTGGTCGCCGTCAGGCCGCCGGAGGGATCATCG
. : . : . : . : . : . :
rJMSF003I24+ TATAGAAGAAGCCTTGCCAGNGGGATTTGAAGNGNGAATAAAAGGAAAGGCAATAGTT
rJMSF024O05+ TCTATAGAAGAAGCCTTGCCAGNGGGATTTGAAGNGAGAATAAAAGGAAAGGCAATAGTT
rJMSF026L12+ TCTATAGAAGACGCCTTGCCGGAGGGATTTGAAGAGAGAATAAAAGGAAAGGCAATAGTT
____________________________________________________________
consensus TCTATAGAAGAAGCCTTGCCAGAGGGATTTGAAGAGAGAATAAAAGGAAAGGCAATAGTT
. : . : . : . : . : . :
rJMSF003I24+ CNTGGNGGTTGGGTGCAGCNATNTTTGATTTTGNGGCATAAAGCCGTCGGGTATTTCGTG
rJMSF024O05+ CATGGNGGTTGGGNGCAGCNATNTNTGATTTTGNGGCATAAAGCCGTCGGGTATTTCGTG
rJMSF026L12+ CATGGAGGTTGGGTGCCGCAATCTATGATTTTGAGGCATAAAGCCGTCGGGTATTTCGTG
____________________________________________________________
consensus CATGGAGGTTGGGTGCAGCAATCTTTGATTTTGAGGCATAAAGCCGTCGGGTATTTCGTG
. : . : . : . : . : . :
rJMSF003I24+ AACCCCGGNGGATTTGCGTCAATGTGGGAGTCGTTGGCGTGCCNTTGCCGGATAATTGNG
rJMSF024O05+ AACCCCGGNGGATTTGCGTCAATGTGGGAGTCGTTGGCGTGCCNTTGCCGGATAATTGNG
rJMSF026L12+ AACCACGGCGGATCTGCGTCAATGCGGGAGTCGTTGGCCAGCCAGTGCCGGATAATTGTG
____________________________________________________________
consensus AACCCCGGCGGATTTGCGTCAATGTGGGAGTCGTTGGCGTGCCATTGCCGGATAATTGTG
. : . : . : . : . : . :
rJMSF003I24+ GCNCCTCCAAACAGATATGACTTCGCTTTGAATGCTCGTCTCNTGACGGAAGAACTTGAG
rJMSF024O05+ GCNCCTCCAAACAGATATGACTTCGCTTTGAATGCTCGTCTCNTGACGGAAGAACTTGAG
rJMSF026L12+ GCACCTCCAAATAGATATGACCTCACTTTGAATGCTCGTCTCATGGCGGAGGAACTTGAG
____________________________________________________________
consensus GCACCTCCAAACAGATATGACTTCGCTTTGAATGCTCGTCTCATGACGGAAGAACTTGAG
. : . : . : . : . : . :
rJMSF003I24+ GCCGCTGTTGAGGTTCAAACGGATGAAAATGGTAGATTTTTCAAGGAAAATNTGNGCAAT
rJMSF024O05+ GCCGCTGTTGAGGTTCAAACGGATGAAAATGGTAGATTTTTCAAGGAAAATNTGTGCAAT
rJMSF026L12+ GCCGCTGTTGAGGTTCAAAGGGATGAAAATGGCAGATTTTTCAAGGAAAATCTGTGCAAT
____________________________________________________________
consensus GCCGCTGTTGAGGTTCAAACGGATGAAAATGGTAGATTTTTCAAGGAAAATCTGTGCAAT
. : . : . : . : . : . :
rJMSF003I24+ GCTATCAAATNTGTGATGGGGGGAAATATCCNGAAGGNGAATCATAAGAAATGGAAGGAT
rJMSF024O05+ GCTATCAAATNTGTGATGGGGGGAAATATCCNGAAGGNGAATCNTAAGAAATGGAAGGAT
rJMSF026L12+ GCTATCAAATCTGTGATGGGGGAAAATATCCAGAAGGTGAATCATAAGAAATGGAAGGAT
____________________________________________________________
consensus GCTATCAAATCTGTGATGGGGGGAAATATCCAGAAGGTGAATCATAAGAAATGGAAGGAT
. : . : . : . : . : . :
rJMSF003I24+ TTACTACATAATCCTAACTTCGCNGATGNTTACATAGNCAATTTCNTTCNCNATCTGTAC
rJMSF024O05+ TTACTACATAATCCTAACTTCGCNGATGATTACATAGACAATTTCNTTCCCNATCTGTAC
rJMSF026L12+ TTACTACATAATCCTAACTTCGCAGATAATTACATAGACAATTTCATTCACAATCTGTAC
____________________________________________________________
consensus TTACTACATAATCCTAACTTCGCAGATGATTACATAGACAATTTCATTCCCAATCTGTAC
. : . : . : . : . : . :
rJMSF003I24+ GAGCTCTTGGCAAAATAAATATGTAATGC
rJMSF024O05+ GAGCTCTTGGCAAAATAAATATGTAATGC
rJMSF026L12+ GAGCTCTTGGCAAAATAAATATGTAATGCACACAAAATATGCAGAGGTTTTCAAAAGTTT
____________________________________________________________
consensus GAGCTCTTGGCAAAATAAATATGTAATGCACACAAAATATGCAGAGGTTTTCAAAAGTTT
. : . : . : . : . : . :
rJMSF026L12+ GTTTCTTCCAATTATTTTACTATTATTATTTTCAAGTTAATTGAGCTTACACCATCCTTA
____________________________________________________________
consensus GTTTCTTCCAATTATTTTACTATTATTATTTTCAAGTTAATTGAGCTTACACCATCCTTA
. : . : . : . : . : . :
rJMSF026L12+ TTGTAAGACCAGGATTCACAGTTCACAGTGGACCTTGATGGATTTGTATGTCTTTTGCGT
____________________________________________________________
consensus TTGTAAGACCAGGATTCACAGTTCACAGTGGACCTTGATGGATTTGTATGTCTTTTGCGT
. : . : . : . : . : . :
rJMSF026L12+ CTTGTGTTATAAAAATTTGTAACTTAAGAGTATGAGGTGTGTACTGAAACAAATTAGTAA
____________________________________________________________
consensus CTTGTGTTATAAAAATTTGTAACTTAAGAGTATGAGGTGTGTACTGAAACAAATTAGTAA