Contig 007129:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042C12Sequence648013129 (99)emb|CDY71259.1|1e-68BnaAnng36730D [Brassica napus]594007129 (3)ref|XP_009610723.1|125PREDICTED: uncharacterized protein LOC104104364 [Nicotiana tomentosiformis]
JMSF026K12Sequence663000858 (2)ref|XP_009610723.1|280PREDICTED: uncharacterized protein LOC104104364 [Nicotiana tomentosiformis]674007129 (3)ref|XP_009786123.1|174PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris]
JMSF035F05Sequence628000858 (2)ref|XP_011073597.1|251PREDICTED: uncharacterized protein LOC105158512 [Sesamum indicum]773007129 (3)ref|XP_009786123.1|261PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF035F05+                                                      AACNGGGTACAATTCN
                      ____________________________________________________________
consensus                                                         AACNGGGTACAATTCN
 
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rJMSF035F05+          ATGCACCACTGCAAGATTGAATACAGTGTGGAGCCTTGTTCCACTGCAGCAGCTAAGAGT
                      ____________________________________________________________
consensus             ATGCACCACTGCAAGATTGAATACAGTGTGGAGCCTTGTTCCACTGCAGCAGCTAAGAGT
 
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rJMSF035F05+          GGATGTGTTCATACTAAAAGATTAAGTGTGAGTTTTCCAAGTGGTGGGGATGTTATCTAT
                      ____________________________________________________________
consensus             GGATGTGTTCATACTAAAAGATTAAGTGTGAGTTTTCCAAGTGGTGGGGATGTTATCTAT
 
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rJMSF035F05+          GGTGTTGCACACCAGCACACAGGGGGTACTGGTTCTACTCTTTACGGGGAGGATGGACGG
rJMSF026K12+                                                       GGGGAGGATGGACGG
                      ____________________________________________________________
consensus             GGTGTTGCACACCAGCACACAGGGGGTACTGGTTCTACTCTTTACGGGGAGGATGGACGG
 
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rJMSF035F05+          GCCATATGCTCATCGCTTCCAATCTATGGAGAAGGAATGGAACCGGGAAATGAATCTGGC
rJMFF042C12+                                                                     C
rJMSF026K12+          GCCATATGCTCATCGCTTCCAATCTATGGAGAAGGAATGGAACCGGGAAATGAATCTGGC
                      ____________________________________________________________
consensus             GCCATATGCTCATCGCTTCCAATCTATGGAGAAGGAATGGAACCGGGAAATGAATCTGGC
 
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rJMSF035F05+          TATATTGTAGGAATGACAACCTGCTATCCTCAACCTGGCACGGTCAAGATTGCTGACGGG
rJMFF042C12+          TATATTGTAGGAATGACAACCTGCTATCCTCAACCTGGCACGGTCAAGATTGCTGACGGG
rJMSF026K12+          TATATTGTAGGAATGACAACCTGCTATCCTCAACCTGGCACGGTCAAGATTGCNGACGGG
                      ____________________________________________________________
consensus             TATATTGTAGGAATGACAACCTGCTATCCTCAACCTGGCACGGTCAAGATTGCTGACGGG
 
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rJMSF035F05+          GAGTCTCTGACCATTGTGTCTAATTATAGCAGCCATCAAAGCCATACCGGAGTCATGGGG
rJMFF042C12+          GAGTCTCTGACCATTGTGTCTAATTATAGCAGCCATCAAAGCCATACCGGAGTCATGGGG
rJMSF026K12+          GAGTCTCTGACCATTGTGTCTAATTATAGCAGCCATCAAAGCCATACCGGAGTCATGGGG
                      ____________________________________________________________
consensus             GAGTCTCTGACCATTGTGTCTAATTATAGCAGCCATCAAAGCCATACCGGAGTCATGGGG
 
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rJMSF035F05+          CTTTTCTACATTTTAGTTGCTGATCCGGTACCAGAATCTCGTTCTTTCCTTCGTTCTCAA
rJMFF042C12+          CTTTTCTACATTTTAGTTGCTGATCCGGTACCAGAATCTCGTTCTTTCCTTCGTTCTCAA
rJMSF026K12+          CTTTTCTACATTTTAGTTGCTGATCCGGTACCAGAATCTCGTTCTTTCCTTCGTTCTCAA
                      ____________________________________________________________
consensus             CTTTTCTACATTTTAGTTGCTGATCCGGTACCAGAATCTCGTTCTTTCCTTCGTTCTCAA
 
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rJMSF035F05+          ATTAAGGGTGGTGAGATGATGATACTACCAAATGCTATTTTGATTTTAGCATTTGTTGGA
rJMFF042C12+          ATTAAGGGTGGTGAGATGATGATACTACCAAATGCTATTTTGATTTTAGCATTTGTTGGA
rJMSF026K12+          ATTAAGGGTGGTGAGATGATGATACTACCAAATGCTATTTTGATTTTAGCATTTGTTGGA
                      ____________________________________________________________
consensus             ATTAAGGGTGGTGAGATGATGATACTACCAAATGCTATTTTGATTTTAGCATTTGTTGGA
 
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rJMSF035F05+          ATTGCAGTGCTTGGTGTTGCTGTTATTATGAGTCGGCGTCGGGGTGAAAGGGAGAATGAT
rJMFF042C12+          ATTGCAGTGCTTGGTGTTGCTGTTATTATGAGTCGGCGTCGGGGTGAAAGGGAGAATGAT
rJMSF026K12+          ATTGCAGTGCTTGGTGTTGCTGTTATTATGAGTCGGCGTCGGGGTGAAAGGGAGAATGAT
                      ____________________________________________________________
consensus             ATTGCAGTGCTTGGTGTTGCTGTTATTATGAGTCGGCGTCGGGGTGAAAGGGAGAATGAT
 
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rJMSF035F05+          TATGAACCTATAGTGATGTGAGGGAGGCTTTGCCTTAGATTGAGAATTGATGCTTAATTA
rJMFF042C12+          TATGAACCTATAGTGATGTGAGGGAGGCTTTGCCTTAGATTGAGAATTGATGCTTAATTA
rJMSF026K12+          TATGAACCTATAGTGATGTGAGGGAGGCTTTGCCTTAGATTGAGAANTGATGCTTAATTA
                      ____________________________________________________________
consensus             TATGAACCTATAGTGATGTGAGGGAGGCTTTGCCTTAGATTGAGAATTGATGCTTAATTA
 
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rJMSF035F05+          AATCCAATCCAACATGTGATGTGTTTAGCACTTTGTTAATCACATGTAAGTTAGTTTTAT
rJMFF042C12+          AATCCAATCCAACATGTGATGTGTTTAGCACTTTGTTAATCACATGTAAGTTAGTTTTAT
rJMSF026K12+          AATCCAATCCAACATGTGATGTGTTTAGCACTTTGTTAATCACATGTAAGTTAGTTTTAT
                      ____________________________________________________________
consensus             AATCCAATCCAACATGTGATGTGTTTAGCACTTTGTTAATCACATGTAAGTTAGTTTTAT
 
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rJMSF035F05+          AATAAGGTGGATTGCAATGTCATATATTTTGTATTCTGTAAGTTGTATAAAGTTGTATGC
rJMFF042C12+          AATAAGGTGGATTGCAATGTCATATATTTTGTATTCTGTAAGTTGTAT-AAGTTGTATGC
rJMSF026K12+          AATAAGGTGGATTGCAATGTCATATATTTTGTATTCTGTAAGTNGTAT-AAGTTGTATGC
                      ____________________________________________________________
consensus             AATAAGGTGGATTGCAATGTCATATATTTTGTATTCTGTAAGTTGTAT-AAGTTGTATGC
 
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rJMSF035F05+          TTTCTTTTATATACCTCTCTAC                                      
rJMFF042C12+          TTTCTTTTATATACCTCTCTACAAAGTACGAGATACAACTTTACAGAACACATAAAAAAA
rJMSF026K12+          TTTCTTTTATATACCTCTCTACAAAGTACGAGATACAACTTTACAGAACACATAAAAAAA
                      ____________________________________________________________
consensus             TTTCTTTTATATACCTCTCTACAAAGTACGAGATACAACTTTACAGAACACATAAAAAAA
 
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rJMFF042C12+          TTTCGGTAATTTCCTTAAAATGTACGGAGTAATGTATAAAGAGTTGTCTTTGAG      
rJMSF026K12+          TTTCGGTAATTTCCTTAAAATGTACGGAGTAATGTATAAAGAGTNGTCTTTGAGAATTGC
                      ____________________________________________________________
consensus             TTTCGGTAATTTCCTTAAAATGTACGGAGTAATGTATAAAGAGTTGTCTTTGAGAATTGC