Contig 007122:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025I20Sequence661000379 (5)ref|XP_006341660.1|65.5PREDICTED: uncharacterized protein LOC102583258 [Solanum tuberosum]747007122 (2)ref|XP_009782273.1|315PREDICTED: uncharacterized protein LOC104231045 [Nicotiana sylvestris]
JMSF051M13Sequence704000379 (5)ref|XP_006341660.1|87.0PREDICTED: uncharacterized protein LOC102583258 [Solanum tuberosum]741007122 (2)ref|XP_009782273.1|315PREDICTED: uncharacterized protein LOC104231045 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF051M13+                                             TTCCAAGTGATAAGCGGGTCTTCAT
rJMSF025I20+                                           TCTTCCAAGTGATAAGCGGGTCTTCAT
                      ____________________________________________________________
consensus                                              TCTTCCAAGTGATAAGCGGGTCTTCAT
 
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rJMSF051M13+          CATGACTTTGATCATACATGGTGTNGGATATATAATTGTCCTTATTACCCATGCATCGTC
rJMSF025I20+          CATGACTTTGATCATACATGGTGTTGGATATATAATTGTCCTTATTACCCATGCATCGTC
                      ____________________________________________________________
consensus             CATGACTTTGATCATACATGGTGTTGGATATATAATTGTCCTTATTACCCATGCATCGTC
 
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rJMSF051M13+          TGATGTGACCCAGAAACCACTTCGAGCTGAACGTTATGTGGATTCAACCGGACATCTACA
rJMSF025I20+          TGATGTGACCCAGAAACCACTTCGAGCTGAACGTTATGTGGATTCAACCGGACATCTACA
                      ____________________________________________________________
consensus             TGATGTGACCCAGAAACCACTTCGAGCTGAACGTTATGTGGATTCAACCGGACATCTACA
 
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rJMSF051M13+          GACACTGCGAGGATGGGAAACTGAGCTGGAGGAGTACTCGGGTCTCATCCAAGATTTCTT
rJMSF025I20+          GACACTGCGAGGATGGGAAACTGAGCTGGAGGAGTACTCGGGTCTCATCCAAGATTTCTT
                      ____________________________________________________________
consensus             GACACTGCGAGGATGGGAAACTGAGCTGGAGGAGTACTCGGGTCTCATCCAAGATTTCTT
 
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rJMSF051M13+          TCTGCTTCCTCAAATTATTGGCAACTTCATTTGGCAGATAAATTGCAAGCCACTGAGAAA
rJMSF025I20+          TCTGCTTCCTCAAATTATTGGCAACTTCATTTGGCAGATAAATTGCAAGCCACTGAGAAA
                      ____________________________________________________________
consensus             TCTGCTTCCTCAAATTATTGGCAACTTCATTTGGCAGATAAATTGCAAGCCACTGAGAAA
 
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rJMSF051M13+          TCTATATTACATTGGGATAACATCACTTAGACTTCTCCCTCACCTGTATGATTACATCAG
rJMSF025I20+          TCTATATTACATTGGGATAACATCACTTAGACTTCTCCCTCACCTGTATGATTACATCAG
                      ____________________________________________________________
consensus             TCTATATTACATTGGGATAACATCACTTAGACTTCTCCCTCACCTGTATGATTACATCAG
 
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rJMSF051M13+          ATCTCCAGTTTCCAATCCTTATTTCTCAGAGGAATACGAGTTTGTGAACCCTCGCCTCGA
rJMSF025I20+          ATCTCCAGTTTCCAATCCTTATTTCTCAGAGGAATACGAGTTTGTGAACCCTCGCCTCGA
                      ____________________________________________________________
consensus             ATCTCCAGTTTCCAATCCTTATTTCTCAGAGGAATACGAGTTTGTGAACCCTCGCCTCGA
 
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rJMSF051M13+          CTTTTACACCAAGTTTGGTGACATCGCGATCCCAGTAGTAATGGTTCTTCTAACAGCTAT
rJMSF025I20+          CTTTTACACCAAGTTTGGTGACATCGCGATCCCAGTAGTAATGGTTCTTCTAACAGCTAT
                      ____________________________________________________________
consensus             CTTTTACACCAAGTTTGGTGACATCGCGATCCCAGTAGTAATGGTTCTTCTAACAGCTAT
 
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rJMSF051M13+          AGTCTACATTCAGCAGCGGTGGAGTTATGAGAAGATAAGCCGGACTCTTCAACTAGGCTC
rJMSF025I20+          AGTCTACATTCAGCAGCGGTGGAGTTATGAGAAGATAAGCCGGACTCTTCAACTAGGCTC
                      ____________________________________________________________
consensus             AGTCTACATTCAGCAGCGGTGGAGTTATGAGAAGATAAGCCGGACTCTTCAACTAGGCTC
 
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rJMSF051M13+          AATCAGGCTTCTACCGCAACCATCCAGAGCATACGAGAGGCTGCCTTCTGCATCATTTGA
rJMSF025I20+          AATCAGGCTTCTACCGCAACCATCCAGAGCATACGAGAGGCTGCCTTCTGCATCATTTGA
                      ____________________________________________________________
consensus             AATCAGGCTTCTACCGCAACCATCCAGAGCATACGAGAGGCTGCCTTCTGCATCATTTGA
 
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rJMSF051M13+          AGCTGAACTTTCATCTGCTGTCAGTAAAGATCATGATCCCGAATAATTAGGCTTTACTTC
rJMSF025I20+          AGCTGAACTTTCATCTGCTGTCAGTAAAGATCATGATCCCGAATAATTAGGCTTTACTTC
                      ____________________________________________________________
consensus             AGCTGAACTTTCATCTGCTGTCAGTAAAGATCATGATCCCGAATAATTAGGCTTTACTTC
 
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rJMSF051M13+          TCCCTAGAACTTGAGAAACTTTATGGTTTCAAGTGTACTGCTCTTCTCTGTTTCAAAACC
rJMSF025I20+          TCCCTAGAACTTGAGAAACTTTATGGTTTCAAGTGTACTGCTCTTCTCTGTTTCAAAACC
                      ____________________________________________________________
consensus             TCCCTAGAACTTGAGAAACTTTATGGTTTCAAGTGTACTGCTCTTCTCTGTTTCAAAACC
 
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rJMSF051M13+          TTTCATCTCGGATAACATTTACTTACTAGATTCTTCACTTGTTTCATGTCTGCCAT    
rJMSF025I20+          TTTCATCTCGGATAACATTTACTTACTAGATTCTTCACTTGTTTCATGTCTGCCATTCAC
                      ____________________________________________________________
consensus             TTTCATCTCGGATAACATTTACTTACTAGATTCTTCACTTGTTTCATGTCTGCCATTCAC