Contig 007120:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024P12Sequence644013404 (2)ref|XP_006343987.1|2e-57PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]785007120 (2)gb|AFP93564.1|5e-68GCS [Cestrum nocturnum]
JMSF029C21Sequence647013404 (2)ref|XP_006343987.1|2e-57PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]687007120 (2)gb|AFP93564.1|2e-55GCS [Cestrum nocturnum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024P12+ GGTGA
                      ____________________________________________________________
consensus GGTGA
 
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rJMSF024P12+ GACTTAAAAGATACTTGGAGATGAGGGGTGCTGACNGAGGANCCGTGGAGGCGGCTATGT
                      ____________________________________________________________
consensus GACTTAAAAGATACTTGGAGATGAGGGGTGCTGACNGAGGANCCGTGGAGGCGGCTATGT
 
. : . : . : . : . : . :
rJMSF029C21+ ATACGATGAGATATCTTTACAAGCTGTTCTG
rJMSF024P12+ GCATTGCCCGCTTTTTGGGTGGGGCTATTATACGATGAGATATCTTTACAAGCTGTTCTG
                      ____________________________________________________________
consensus GCATTGCCCGCTTTTTGGGTGGGGCTATTATACGATGAGATATCTTTACAAGCTGTTCTG
 
. : . : . : . : . : . :
rJMSF029C21+ GACATGACAGCCGATTGGACTTTGGAAGAACGAGAGATGTTGAGGAAGAAGGTGCCAGTA
rJMSF024P12+ GACATGACAGCCGATTGGACTTTGGAAGAACGAGAGATGTTGAGGAAGAAGGTGCCAGTA
                      ____________________________________________________________
consensus GACATGACAGCCGATTGGACTTTGGAAGAACGAGAGATGTTGAGGAAGAAGGTGCCAGTA
 
. : . : . : . : . : . :
rJMSF029C21+ ACTGGTCTAAAGACGCCATTTCGTGATGGGTTGCTGAAGCACGTTGCTCAAGATGTTCTA
rJMSF024P12+ ACTGGTCTAAAGACGCCATTTCGTGATGGGTTGCTGAAGCACGTTGCTCAAGATGTTCTA
                      ____________________________________________________________
consensus ACTGGTCTAAAGACGCCATTTCGTGATGGGTTGCTGAAGCACGTTGCTCAAGATGTTCTA
 
. : . : . : . : . : . :
rJMSF029C21+ AAGCTGGCAAAGGAAGGCTTAGAAAGAAGAGGCTTTAAAGAAACGGGATTTTTGAATGAA
rJMSF024P12+ AAGCTGGCAAAGGAAGGCTTAGAAAGAAGAGGCTTTAAAGAAACGGGATTTTTGAATGAA
                      ____________________________________________________________
consensus AAGCTGGCAAAGGAAGGCTTAGAAAGAAGAGGCTTTAAAGAAACGGGATTTTTGAATGAA
 
. : . : . : . : . : . :
rJMSF029C21+ ATAACCGAGGTTGTCAATACAGGTATTACACCAGCCGAGAAGCTCTTGGACTTGTACCAC
rJMSF024P12+ ATAACCGAGGTTGTCAATACAGGTATTACACCAGCCGAGAAGCTCTTGGACTTGTACCAC
                      ____________________________________________________________
consensus ATAACCGAGGTTGTCAATACAGGTATTACACCAGCCGAGAAGCTCTTGGACTTGTACCAC
 
. : . : . : . : . : . :
rJMSF029C21+ AGGAAGTGGGGACAAAATGTCGATCCAGTATTCGAGGAGCTGCTCTATTGAGGCGCCCGA
rJMSF024P12+ AGGAAGTGGGGACAAAATGTCGATCCAGTATTCGAGGAGCTGCTCTATTGAGGCGCCCGA
                      ____________________________________________________________
consensus AGGAAGTGGGGACAAAATGTCGATCCAGTATTCGAGGAGCTGCTCTATTGAGGCGCCCGA
 
. : . : . : . : . : . :
rJMSF029C21+ GGGTCTCAGGCACAGTATGTACCCCGATACATTTCTGTATTGCGAGTTTGCGACCATCCA
rJMSF024P12+ GGGTCTCAGGCACAGTATGTACCCCGATACATTTCTGTATTGCGAGTTTGCGACCATCCA
                      ____________________________________________________________
consensus GGGTCTCAGGCACAGTATGTACCCCGATACATTTCTGTATTGCGAGTTTGCGACCATCCA
 
. : . : . : . : . : . :
rJMSF029C21+ TCTTTAACACCTAGAGAAATTACCCCCATGCTAACTTTTCTCGATTGCTTTCCGGTAAAG
rJMSF024P12+ TCTTTAACACCTAGAGAAATTACCCCCATGCTAACTTTTCTCGATTGCTTTCCGGTAAAG
                      ____________________________________________________________
consensus TCTTTAACACCTAGAGAAATTACCCCCATGCTAACTTTTCTCGATTGCTTTCCGGTAAAG
 
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rJMSF029C21+ ATTACACAATCCATCTCTGCTATAGCACGATAATGAAACAATGCAGTTGCAATAATACGA
rJMSF024P12+ ATTACACAATCCATCTCTGCTATAGCACGATAATGAAACAATGCAGTTGCAATAATACGA
                      ____________________________________________________________
consensus ATTACACAATCCATCTCTGCTATAGCACGATAATGAAACAATGCAGTTGCAATAATACGA
 
. : . : . : . : . : . :
rJMSF029C21+ GTTTCCCAGAAGATGGGGTTCATTTCTCGTGGGTCGTTTTATGGTCTTTTGCTGTTATTA
rJMSF024P12+ GTTTCCCAGAAGATGGGGTTCATTTCTCGTGGGTCGTTTTATGGTCTTTTGCTGTTATTA
                      ____________________________________________________________
consensus GTTTCCCAGAAGATGGGGTTCATTTCTCGTGGGTCGTTTTATGGTCTTTTGCTGTTATTA
 
. : . : . : . : . : . :
rJMSF029C21+ TTTTTGTCGCTGTTTATGGTGGTTCTGTGATCTGAGCTGAACAATCTGTTGGTGGTTTTG
rJMSF024P12+ TTTTTGTCGCTGTTTATGGTGGTTCTGTGATCTGAGCTGAACAATCTGTTGGTGGTTTTG
                      ____________________________________________________________
consensus TTTTTGTCGCTGTTTATGGTGGTTCTGTGATCTGAGCTGAACAATCTGTTGGTGGTTTTG
 
. : . : . : . : . : . :
rJMSF029C21+ GTGAAGATTACAATCTTCTGTATTTCAAATAGGGTTTTGAAGTTGTTGTTAGAGAT
rJMSF024P12+ GTGAAGATTACAATCTTCTGTATTTCAAATAGGGTTTTGAAGTTGTTGTTAGAGATTGAT
                      ____________________________________________________________
consensus GTGAAGATTACAATCTTCTGTATTTCAAATAGGGTTTTGAAGTTGTTGTTAGAGATTGAT