Contig 007119:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042N02Sequence632000755 (2)ref|XP_009791857.1|3e-78PREDICTED: uncharacterized protein At1g01500 [Nicotiana sylvestris]586007119 (2)ref|XP_004248060.1|1e-35PREDICTED: uncharacterized protein At1g01500 isoform X2 [Solanum lycopersicum]
JMSF024M04Sequence670000755 (2)ref|XP_009791857.1|9e-81PREDICTED: uncharacterized protein At1g01500 [Nicotiana sylvestris]755007119 (2)ref|XP_009791857.1|1e-49PREDICTED: uncharacterized protein At1g01500 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF024M04+                                   TCAGGTTAGCCCNCGAAAGAAGNTGTTGAGGCAGG
                      ____________________________________________________________
consensus                                      TCAGGTTAGCCCNCGAAAGAAGNTGTTGAGGCAGG
 
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rJMFF042N02+                                               GAAGGATCAAAGGAGTGTTAATG
rJMSF024M04+          GGATGCTGGATGCTATTCCGGAGGATGAGGAAATCTGGAAGGATCAAAGGAGTGTTAATG
                      ____________________________________________________________
consensus             GGATGCTGGATGCTATTCCGGAGGATGAGGAAATCTGGAAGGATCAAAGGAGTGTTAATG
 
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rJMFF042N02+          GATTGGTTCTACAACGTAAAACACCGATAGCAGAGGCAGATATGGATGATTACGGTTTAG
rJMSF024M04+          GATTGGTTCTACAACGTAAAACACCGATAGCAGAGGCAGATATGGATGATTACGGTTTAG
                      ____________________________________________________________
consensus             GATTGGTTCTACAACGTAAAACACCGATAGCAGAGGCAGATATGGATGATTACGGTTTAG
 
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rJMFF042N02+          ATGAGAAAGCTGTACATGGCTCATATTATGACGGAATGTACCCTGGTGAAGATGGGCAAT
rJMSF024M04+          ATGAGAAAGCTGTACATGGCTCATATTATGACGGAATGTACCCTGGTGAAGATGGGCAAT
                      ____________________________________________________________
consensus             ATGAGAAAGCTGTACATGGCTCATATTATGACGGAATGTACCCTGGTGAAGATGGGCAAT
 
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rJMFF042N02+          TGTCCTGGTTTAATGCTGGCTTGAGGGTTGGCGTTGGAATAGGCCTTGGGATGTGCGTAG
rJMSF024M04+          TGTCCTGGTTTAATGCTGGCTTGAGGGTTGGCGTTGGAATAGGCCTTGGGATGTGCGTAG
                      ____________________________________________________________
consensus             TGTCCTGGTTTAATGCTGGCTTGAGGGTTGGCGTTGGAATAGGCCTTGGGATGTGCGTAG
 
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rJMFF042N02+          GCGTTGGTATTGGTGTAGGACTTCTTATGCGATCTTATCAAGCAACCACCAAGAACCTAC
rJMSF024M04+          GCGTTGGTATTGGTGTAGGACTTCTTATGCGATCTTATCAAGCAACCACCAAGAACCTAC
                      ____________________________________________________________
consensus             GCGTTGGTATTGGTGTAGGACTTCTTATGCGATCTTATCAAGCAACCACCAAGAACCTAC
 
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rJMFF042N02+          GAAGGAGGTTTTTCTAGATCTGCTGGTTTCAATGCTAAGAGTGGTAATATCCCATCCAGA
rJMSF024M04+          GAAGGAGGTTTTTCTAGATCTGCTGGTTTCAATGCTAAGAGTGGTAATATCCCATCCAGA
                      ____________________________________________________________
consensus             GAAGGAGGTTTTTCTAGATCTGCTGGTTTCAATGCTAAGAGTGGTAATATCCCATCCAGA
 
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rJMFF042N02+          TTGGAATTGTAAACCTTTTCTGATCTTTTTTGAGTATTAGCAAGCATCAAAGTGGCTCTG
rJMSF024M04+          TTGGAATTGTAAACCTTTTCTGATCTTTTTTGAGTATTAGCAAGCATCAAAGTGGCTCTG
                      ____________________________________________________________
consensus             TTGGAATTGTAAACCTTTTCTGATCTTTTTTGAGTATTAGCAAGCATCAAAGTGGCTCTG
 
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rJMFF042N02+          AGGACATGAAGATTGGAAATGTGATCATTTTGGACATGTTTTGGCAGCTGCTCAAGTCTT
rJMSF024M04+          AGGACATGAAGATTGGAAATGTGATCATTTTGGACATGTTTTGGCAGCTGCTCAAGTCTT
                      ____________________________________________________________
consensus             AGGACATGAAGATTGGAAATGTGATCATTTTGGACATGTTTTGGCAGCTGCTCAAGTCTT
 
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rJMFF042N02+          CAACCTTATATTGTAAGTTGGCTATAGTGAAAGGATAGTAGGCAGCAAATAATAGCAATG
rJMSF024M04+          CAACCTTATATTGTAAGTTGGCTATAGTGAAAGGATAGTAGGCAGCAAATAATAGCAATG
                      ____________________________________________________________
consensus             CAACCTTATATTGTAAGTTGGCTATAGTGAAAGGATAGTAGGCAGCAAATAATAGCAATG
 
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rJMFF042N02+          ATGTTAGTAGTGGGGTTGTTTAAAGTGTATGTAGTTGAGCATTTGTGTAAATATTTGCTT
rJMSF024M04+          ATGTTAGTAGTGGGGTTGTTTAAAGTGTATGTAGTTGAGCATTTGTGTAAATATTTGCTT
                      ____________________________________________________________
consensus             ATGTTAGTAGTGGGGTTGTTTAAAGTGTATGTAGTTGAGCATTTGTGTAAATATTTGCTT
 
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rJMFF042N02+          GGTTAGAAGAGTGTTTTTGTTGT                                     
rJMSF024M04+          GGTTAGAAGAGTGTTTTTGTTGTTAGTGCCATTCTCTTGTGATTGGGTTTGCATAGCTTA
                      ____________________________________________________________
consensus             GGTTAGAAGAGTGTTTTTGTTGTTAGTGCCATTCTCTTGTGATTGGGTTTGCATAGCTTA
 
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rJMSF024M04+          CATTTGTGATTCAATTTTCCCCTTAAAAAAGTGATGAGGTAGGGTAAAGTGTGTGAAGCT
                      ____________________________________________________________
consensus             CATTTGTGATTCAATTTTCCCCTTAAAAAAGTGATGAGGTAGGGTAAAGTGTGTGAAGCT