Contig 007114:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023B01Sequence684007114 (2)ref|XP_009592874.1|1e-104PREDICTED: uncharacterized protein LOC104089633 isoform X2 [Nicotiana tomentosi724007114 (2)ref|XP_006363542.1|144PREDICTED: uncharacterized protein LOC102594748 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF023B01-                                  TGACAAGTGCAGTTTAACAACAATGGAAGTGGGAATT
                      ____________________________________________________________
consensus                                    TGACAAGTGCAGTTTAACAACAATGGAAGTGGGAATT
 
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JMSF023B01-           CTTAACTACCTCATTCCGTTGAACCTAGATCCGCAACGGCCCCGGAATTCCCGCCGTGTC
                      ____________________________________________________________
consensus             CTTAACTACCTCATTCCGTTGAACCTAGATCCGCAACGGCCCCGGAATTCCCGCCGTGTC
 
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JMSF023B01-           CCCTCTTTCCGGCGCTATGTTACCGTTAAAGCTTCTCTCAACAATTCTCAGGGAGGAAGT
                      ____________________________________________________________
consensus             CCCTCTTTCCGGCGCTATGTTACCGTTAAAGCTTCTCTCAACAATTCTCAGGGAGGAAGT
 
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JMSF023B01-           TTCAGAGGGCCGGAGCCGAAGAGGGAATGGGTGGCGGATTGGGTATCCAACAACGACAGT
                      ____________________________________________________________
consensus             TTCAGAGGGCCGGAGCCGAAGAGGGAATGGGTGGCGGATTGGGTATCCAACAACGACAGT
 
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JMSF023B01-           TTCGTCCGGAGCTTGCCGATATACGTCGGAGCGCTCTCCTTATTGGCCGTTCTCGTCAAC
                      ____________________________________________________________
consensus             TTCGTCCGGAGCTTGCCGATATACGTCGGAGCGCTCTCCTTATTGGCCGTTCTCGTCAAC
 
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JMSF023B01-           CGCGCCGTCTCCGGCATCGCTCCGGTCGCTGACGCCGGCAGTTCACAATCTAGAGCAGAT
                      ____________________________________________________________
consensus             CGCGCCGTCTCCGGCATCGCTCCGGTCGCTGACGCCGGCAGTTCACAATCTAGAGCAGAT
 
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JMSF023B01-           CTATTAACACTTGGATTAGCTGTTACCAACATCTTGAACGGTCTGGTGTGGCTTTCAATC
                      ____________________________________________________________
consensus             CTATTAACACTTGGATTAGCTGTTACCAACATCTTGAACGGTCTGGTGTGGCTTTCAATC
 
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JMSF023B01-           AAACCGAAATCTATATCTGTTGTAGATCCTATAGGTGTGGACTGCCAAAGAATTGCTTCT
                      ____________________________________________________________
consensus             AAACCGAAATCTATATCTGTTGTAGATCCTATAGGTGTGGACTGCCAAAGAATTGCTTCT
 
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JMSF023B01-           GATCTTCCTGAATTTGTAATTTCTGAATTGTTCTGGACATGGGATTCTCTATCAAATGCA
                      ____________________________________________________________
consensus             GATCTTCCTGAATTTGTAATTTCTGAATTGTTCTGGACATGGGATTCTCTATCAAATGCA
 
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JMSF023B01-           ACACGCTGCAGGTCTCTGGTTATTGTTTATGATAGCAAATGTATCCTTCAAATTGGAGTT
rJMSF023B01+                                                                  AGTT
                      ____________________________________________________________
consensus             ACACGCTGCAGGTCTCTGGTTATTGTTTATGATAGCAAATGTATCCTTCAAATTGGAGTT
 
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JMSF023B01-           GCTGCTGTTTCTTCATCTGATGATGCAGTCCTTGTAGATGCTAATAAATTGATGCAAGGA
rJMSF023B01+          GCTGCTGTTTCTTCATCTGATGATGCAGTCCTTGTAGATGCTAATAAATTGATGCAAGGA
                      ____________________________________________________________
consensus             GCTGCTGTTTCTTCATCTGATGATGCAGTCCTTGTAGATGCTAATAAATTGATGCAAGGA
 
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JMSF023B01-           TCACTTTATCAAGATGTTACAAAATCTGGATCACAGAGGTATTTGGC             
rJMSF023B01+          TCACTTTATCAAGATGTTACAAAATCTGGATCACAGAGGTATTTGGCCAACTTATCTCTT
                      ____________________________________________________________
consensus             TCACTTTATCAAGATGTTACAAAATCTGGATCACAGAGGTATTTGGCCAACTTATCTCTT
 
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rJMSF023B01+          TATCCTGGGAAGTCAGAGTTACCCTTTTTGCCTTTAAATACGCAGGCAGTAATTTTGCAA
                      ____________________________________________________________
consensus             TATCCTGGGAAGTCAGAGTTACCCTTTTTGCCTTTAAATACGCAGGCAGTAATTTTGCAA
 
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rJMSF023B01+          CCTATTGGAGACAAAGGAATTGCCATAATTGGTGGTGATACAGTCAGAGGATTTACGACT
                      ____________________________________________________________
consensus             CCTATTGGAGACAAAGGAATTGCCATAATTGGTGGTGATACAGTCAGAGGATTTACGACT
 
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rJMSF023B01+          TCTGATCAGGCATGGATCACTTTGATTGGGGAGAAATTAGATGCTACATTAACAAAAGTT
                      ____________________________________________________________
consensus             TCTGATCAGGCATGGATCACTTTGATTGGGGAGAAATTAGATGCTACATTAACAAAAGTT
 
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rJMSF023B01+          GTGAGTGACATCCCTGCTGGCGGTGTAAGATAGTATTCTGTATCTCAAATTGGTCTTTAT
                      ____________________________________________________________
consensus             GTGAGTGACATCCCTGCTGGCGGTGTAAGATAGTATTCTGTATCTCAAATTGGTCTTTAT
 
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rJMSF023B01+          TGAAGGTAATTTATAGCTGCCACTTAAGTCCATATCAAACAAGCTGTGTGACAGTTTGGA
                      ____________________________________________________________
consensus             TGAAGGTAATTTATAGCTGCCACTTAAGTCCATATCAAACAAGCTGTGTGACAGTTTGGA
 
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rJMSF023B01+          GAATTATTGCATCAACTAGGAACTCTGATCTTCGAGTGTTCCATAGTACGGATTACTAGA
                      ____________________________________________________________
consensus             GAATTATTGCATCAACTAGGAACTCTGATCTTCGAGTGTTCCATAGTACGGATTACTAGA
 
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rJMSF023B01+          TCTTGCTATGAAAATGAGGAGCGTGTATCGTGTATGCACGAGAAGTTTGGATGATGTGCT
                      ____________________________________________________________
consensus             TCTTGCTATGAAAATGAGGAGCGTGTATCGTGTATGCACGAGAAGTTTGGATGATGTGCT
 
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rJMSF023B01+          TTAAGTTGAAGCTGGAAAAGTATTCTTGAATCCCAGCCCAAACAGAAATGAAGAAGCATC
                      ____________________________________________________________
consensus             TTAAGTTGAAGCTGGAAAAGTATTCTTGAATCCCAGCCCAAACAGAAATGAAGAAGCATC
 
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rJMSF023B01+          TTTCATGCTCTTTATGATTACTCTTTTTGGTGATTTTTAATTTCAGATACATTTGATAGA
                      ____________________________________________________________
consensus             TTTCATGCTCTTTATGATTACTCTTTTTGGTGATTTTTAATTTCAGATACATTTGATAGA
 
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rJMSF023B01+          ACAATACAAAGCTTTGCAAAGGGGTTTTAGTAGTTAAGGATTTCTTACTGCTCCCGCATT
                      ____________________________________________________________
consensus             ACAATACAAAGCTTTGCAAAGGGGTTTTAGTAGTTAAGGATTTCTTACTGCTCCCGCATT