Contig 007112:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003I22Sequence324002235 (8)680007112 (3)emb|CDP14061.1|1e-51unnamed protein product [Coffea canephora]
JMSF022G09Sequence641002235 (8)ref|XP_009788205.1|176PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris]736007112 (3)emb|CDP14061.1|4e-50unnamed protein product [Coffea canephora]
JMSF023H18Sequence649002235 (8)ref|XP_009788205.1|175PREDICTED: uncharacterized protein LOC104236057 [Nicotiana sylvestris]667007112 (3)emb|CDP14061.1|1e-50unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF022G09+ TACCGCCATTTTCTTC
                      ____________________________________________________________
consensus TACCGCCATTTTCTTC
 
. : . : . : . : . : . :
rJMSF023H18+ TTATCAACAGCAAAGCCATCAGTGCTTTTGGCGCCCAAGCAACCTTTTAATTTGGCTGA
rJMSF003I22+ TTATCAACAGCAAAGCCATCAGTGCTTTTGGCGCCCAAGCAACCTTTTAATTTGGCTGA
rJMSF022G09+ TTTATCAACAGCAAAGCCATCAGTGCTTTTGGCGCCCAAGCAACCTTTTAATTTGGCTGA
                      ____________________________________________________________
consensus TTTATCAACAGCAAAGCCATCAGTGCTTTTGGCGCCCAAGCAACCTTTTAATTTGGCTGA
 
. : . : . : . : . : . :
rJMSF023H18+ TGTTTCCCCTTTAGATTTGCCACCTCTTCTACCTGATCCATTGGTCAGGTTGCCATTAAC
rJMSF003I22+ TGTTTCCCCTTTAGATTTGCCACCTCTTCTACCTGATCCATTGGTCAGGTTGCCATTAAC
rJMSF022G09+ TGTTTCCCCTTTAGATTTGCCACCTCTTCTACCTGATCCATTGGTCAGGTTGCCATTAAC
                      ____________________________________________________________
consensus TGTTTCCCCTTTAGATTTGCCACCTCTTCTACCTGATCCATTGGTCAGGTTGCCATTAAC
 
. : . : . : . : . : . :
rJMSF023H18+ TTTGCCAGTCTCGCAGCAGATACCAACCTTCACTCCTTTAATTTGCGATCCTATAGTCCA
rJMSF003I22+ TTTGCCAGTCTCGCAGCAGATACCAACCTTCACTCCTTTAATTTGCGATCCTATAGTCCA
rJMSF022G09+ TTTGCCAGTCTCGCAGTAGATACCAACCTTCACTCCTTTAATTTGCGATCCTATAGTCCA
                      ____________________________________________________________
consensus TTTGCCAGTCTCGCAGCAGATACCAACCTTCACTCCTTTAATTTGCGATCCTATAGTCCA
 
. : . : . : . : . : . :
rJMSF023H18+ CATTCCATTTATTGATGTTTGTTCTTCAGGGCAAGGCTACTTGGTGAGTGCAGGCCCAGG
rJMSF003I22+ CATTCCATTTATTGATGTTTGTTCTTCAGGGCAAGGCTACTTGGTGAGTGCAGGCCCAGG
rJMSF022G09+ CATTCCATTTATTGATGTTTGTTCTTCAGGGCAAGGCTACTTGGTGAGTGCAGGCCCAGG
                      ____________________________________________________________
consensus CATTCCATTTATTGATGTTTGTTCTTCAGGGCAAGGCTACTTGGTGAGTGCAGGCCCAGG
 
. : . : . : . : . : . :
rJMSF023H18+ TATGTCAACTGGCATTCCCCCATTGCACCCAAATCTTGTGAGCCCATTAATTCCCGGGGC
rJMSF003I22+ TATGTCAACTGGCATTCCCCCATTGCACCCAAATCTTGTGAGCCCATTAATTCCCGAGGC
rJMSF022G09+ TATGTCAACTGGCATTCCCCCATTGCACCCAAATCTTGTGAGCCCATTAATTCCCGAGGC
                      ____________________________________________________________
consensus TATGTCAACTGGCATTCCCCCATTGCACCCAAATCTTGTGAGCCCATTAATTCCCGAGGC
 
. : . : . : . : . : . :
rJMSF023H18+ CGAGTCTGTGGTAGAAAAGAGTGCCAGAGAGACGCTTCGTATGCTCATGAATAGCTCCAA
rJMSF003I22+ CGAGTCTGTGGTAGAAAAGAGTGCCAGAGAGACGCTTCGTATGCTCATGAATAGCTCCAA
rJMSF022G09+ CGAGTCTGTGGTAGAAAAGAGTGCCAGAGAGACGCTTCGTATGCTCATGAATAGCTCCAA
                      ____________________________________________________________
consensus CGAGTCTGTGGTAGAAAAGAGTGCCAGAGAGACGCTTCGTATGCTCATGAATAGCTCCAA
 
. : . : . : . : . : . :
rJMSF023H18+ TCAACCCAATGCACCATTGATGAGTGTTCTGCCATCTTTTCTGCCTAGCAGTGAAGAGAA
rJMSF003I22+ TCAACCCAATGCACCATTGATGAGTGTTCTGCCATCTTTTCTGCCTAGCAGTGAAGAGAA
rJMSF022G09+ TCAACCCAATGCACCATTGATGAGTGTTCTGCCATCTTTTCTGCCTAGCAGTGAAGAGAA
                      ____________________________________________________________
consensus TCAACCCAATGCACCATTGATGAGTGTTCTGCCATCTTTTCTGCCTAGCAGTGAAGAGAA
 
. : . : . : . : . : . :
rJMSF023H18+ GCTGAGCGTGTTAGGTGGTGGAAGCAGGGGCCTCTACAGTGGAACCATAGACATAGATGT
rJMSF003I22+ GCTGAGCGTGTTAGGTGGTGGAAGCAGGGGCCTCTACAGTGGAACCATAGACATAGATGT
rJMSF022G09+ GCTGAGCGTGTTAGGTGGTGGAAGCAGGGGCCTCTACAGTGGAACCATAGACATAGATGT
                      ____________________________________________________________
consensus GCTGAGCGTGTTAGGTGGTGGAAGCAGGGGCCTCTACAGTGGAACCATAGACATAGATGT
 
. : . : . : . : . : . :
rJMSF023H18+ TACCACAGTATCCGTAGCCAAAATCAGCAAAAGGGACATTGGAGAAAAGCATTTTGTTGA
rJMSF003I22+ TACCACAGTATCCGTAGCCAAAATCAGCAAAAGGGACATTGGAGAAAAGCATTTTGTTGA
rJMSF022G09+ TACCACAGTATCCGTAGCCAAAATCAGCAAAAGGGACATTGGAGAAAAGCATTTTGTTGA
                      ____________________________________________________________
consensus TACCACAGTATCCGTAGCCAAAATCAGCAAAAGGGACATTGGAGAAAAGCATTTTGTTGA
 
. : . : . : . : . : . :
rJMSF023H18+ GGCGACAGAAATGCCATCTAACTCAGATGGCACTATGTTTGGCGATGATGGTTTTTCACA
rJMSF003I22+ GGCGACAGAAATGCCATCTAACTCAGATGGCACTATGTTTGGCGATGATGGTTTTTCACA
rJMSF022G09+ GGCGACAGAAATGCCATCTAACTCAGATGGCACTATGTTTGGCGATGATGGTTTTTCACA
                      ____________________________________________________________
consensus GGCGACAGAAATGCCATCTAACTCAGATGGCACTATGTTTGGCGATGATGGTTTTTCACA
 
. : . : . : . : . : . :
rJMSF023H18+ TTCAGGAGATGGAAAGAGCAGCGCATGATTTGTTGTCTTTCTAGTACTTTGTAGATTCAA
rJMSF003I22+ TTCAGGAGATGGAAAGAGCAGCGCATGATTTGTTGTCTTTCTAGTACTTTGTAGATTCAA
rJMSF022G09+ TTCAGGAGATGGAAAGAGCAGCGCATGATTTGTTGTCTTTCTAGTACTTTGTAGATTCAA
                      ____________________________________________________________
consensus TTCAGGAGATGGAAAGAGCAGCGCATGATTTGTTGTCTTTCTAGTACTTTGTAGATTCAA
 
. : . : . : . : . : . :
rJMSF023H18+ AGCTTTTT
rJMSF003I22+ AGCTTTTTGTTAGAAC
rJMSF022G09+ AGCTTTTTGTTAGAACTGTACAGTCGACTCTCTCAACCATAAGCAATTATTTTCTGCTTT
                      ____________________________________________________________
consensus AGCTTTTTGTTAGAACTGTACAGTCGACTCTCTCAACCATAAGCAATTATTTTCTGCTTT