Contig 007105:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF044M16+                          TGAACGGCCTTTCTCCATCTCATATTCTTGAAATCCCAAACTCA
rJMSF021G18+                                                             CCAAACTCA
                      ____________________________________________________________
consensus                             TGAACGGCCTTTCTCCATCTCATATTCTTGAAATCCCAAACTCA
 
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rJMSF044M16+          AATTGAACTCCAACATCAACAGCAGAAAGAGGCTTTAGCTGCTCTGTCATCATCTTCTTC
rJMSF021G18+          AATTGAACTCCAACATCAACAGCAGAAAGAGGCTTTAGCTGCTCTGTCATCATCTTCTTC
                      ____________________________________________________________
consensus             AATTGAACTCCAACATCAACAGCAGAAAGAGGCTTTAGCTGCTCTGTCATCATCTTCTTC
 
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rJMSF044M16+          CCCTGTTTTTACTCTGTTTCAGAATCAGCAGAAATCCCCCCCTTTGGGAACGAAACCAGT
rJMSF021G18+          CCCTGTTTTTACTCTGTTTCAGAATCAGCAGAAATCCCCCCCTTTGGGAACGAAACCAGT
                      ____________________________________________________________
consensus             CCCTGTTTTTACTCTGTTTCAGAATCAGCAGAAATCCCCCCCTTTGGGAACGAAACCAGT
 
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rJMSF044M16+          CCCGATGAAGCAGAAGCCGGGGAAGCTTTACCGGGGGGTGAGACAGCGGCATTGGGGGAA
rJMSF021G18+          CCCGATGAAGCAGAAGCCGGGGAAGCTTTACCGGGGGGTGAGACAGCGGCATTGGGGGAA
                      ____________________________________________________________
consensus             CCCGATGAAGCAGAAGCCGGGGAAGCTTTACCGGGGGGTGAGACAGCGGCATTGGGGGAA
 
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rJMSF044M16+          ATGGGTAGCCGAAATCCGGCTGCCGAAGAACAGAACCAGGCTCTGGCTAGGAACCTTCGA
rJMSF021G18+          ATGGGTAGCCGAAATCCGGCTGCCGAAGAACAGAACCAGGCTCTGGCTAGGAACCTTCGA
                      ____________________________________________________________
consensus             ATGGGTAGCCGAAATCCGGCTGCCGAAGAACAGAACCAGGCTCTGGCTAGGAACCTTCGA
 
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rJMSF044M16+          CACGGCGGAAGAAGCCGCCATGGCTCACGATAAGGCGGCTTACAAGCTGAGAGGAGAGAA
rJMSF021G18+          CACGGCGGAAGAAGCCACCATGGCTCACGATAAGGCGGCTTACAAGCTGAGAGGAGAGAA
                      ____________________________________________________________
consensus             CACGGCGGAAGAAGCCGCCATGGCTCACGATAAGGCGGCTTACAAGCTGAGAGGAGAGAA
 
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rJMSF044M16+          TGCGAGGCTGAATTTCCCACACTTTCTCAGCCACGACCACGGCGTCGAAGGGTTCAAGCC
rJMSF021G18+          TGCGAGGCTGAATTTCCCACACTTTCTCAGCCACGACCACGGCGTCGAAGGGTTCAAGCC
                      ____________________________________________________________
consensus             TGCGAGGCTGAATTTCCCACACTTTCTCAGCCACGACCACGGCGTCGAAGGGTTCAAGCC
 
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rJMSF044M16+          GCTGCACTCCTCGGTTGTCGCAAAGCTGGAAGCCATTTGCCAGAGCTTGACTCATAATAA
rJMSF021G18+          GCTGCACTCCTCGGTTGTCGCAAAGCTGGAAGCCATTTGCCAGAGCTTGACTCATAATAA
                      ____________________________________________________________
consensus             GCTGCACTCCTCGGTTGTCGCAAAGCTGGAAGCCATTTGCCAGAGCTTGACTCATAATAA
 
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rJMSF044M16+          TGACAACTCCAAGTCCCATGAACAACAGAGGAATTCCGAGGAGCCCTGTTTTGGCTCCGG
rJMSF021G18+          TGACAACTCCAAGTCCCATGAACAACAGAGGAATTCCGAGGAGCCCTGTTTTGGCTCCGG
                      ____________________________________________________________
consensus             TGACAACTCCAAGTCCCATGAACAACAGAGGAATTCCGAGGAGCCCTGTTTTGGCTCCGG
 
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rJMSF044M16+          CGCTGCCGAGAATGCTGTGAACGTTAAAACAGAGTCCTCCGGTGTCGGAGCGGCATCTTC
rJMSF021G18+          CGCTGCCGAGAATGCTGTGAACGTTAAAACAGAGTCCTCCGGTGTCGGAGCGGCATCTTC
                      ____________________________________________________________
consensus             CGCTGCCGAGAATGCTGTGAACGTTAAAACAGAGTCCTCCGGTGTCGGAGCGGCATCTTC
 
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rJMSF044M16+          GCCGGAATCTGAGATCACGTTCTTGGAATGGGAGAATATCATCCTGGACAAGTATCCGTC
rJMSF021G18+          GCCGGAATCTGAGATCACGTTCTTGGAATGGGAGAATATCATCCTGGACAAGTATCCGTC
                      ____________________________________________________________
consensus             GCCGGAATCTGAGATCACGTTCTTGGAATGGGAGAATATCATCCTGGACAAGTATCCGTC
 
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rJMSF044M16+          AGCGGAGATTGATTGGGCAGCCCTGTGATTCGCCGGAATCTGCAATTTGATTTTAGACAT
rJMSF021G18+          AGCGGAGATTGATTGGGCAGCCCTGTGATTCGCCGGAATCTGCAATTTGATTTTAGACAT
                      ____________________________________________________________
consensus             AGCGGAGATTGATTGGGCAGCCCTGTGATTCGCCGGAATCTGCAATTTGATTTTAGACAT
 
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rJMSF044M16+          GCGCAGATAGAGATCAATCAACTCAAATCCAACTTGTATAATAATA              
rJMSF021G18+          GCGCAGATAGAGATCAATCAACTCAAATCCAACTTGTATAATAATAATTACTCCGTATAA
                      ____________________________________________________________
consensus             GCGCAGATAGAGATCAATCAACTCAAATCCAACTTGTATAATAATAATTACTCCGTATAA