Contig 007103:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002D21Sequence349000551 (5)753007103 (4)ref|XP_010648052.1|3e-61PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Vitis vin
JMSF010D12Sequence268000551 (5)ref|XP_009781157.1|6e-05PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana776007103 (4)ref|XP_002522044.1|2e-27kinase, putative [Ricinus communis] gb|EEF40244.1| kinase, putative [Ricinus com
JMSF021C06Sequence661000551 (5)ref|XP_009781157.1|6e-46PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana782007103 (4)ref|XP_002522044.1|2e-32kinase, putative [Ricinus communis] gb|EEF40244.1| kinase, putative [Ricinus com
JMSF031F10Sequence660000551 (5)ref|XP_009781157.1|3e-45PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana757007103 (4)ref|XP_009781157.1|2e-45PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana

Alignment

This contig is upended


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rJMSF002D21+                                                           TAAGTCCAGCA
                      ____________________________________________________________
consensus                                                              TAAGTCCAGCA
 
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rJMSF002D21+          ATGTCCTGTTGGATTCGTGCTTCAATGCTAAACTAGGCGATTTTGGGTTAGCCTGGCTTG
                      ____________________________________________________________
consensus             ATGTCCTGTTGGATTCGTGCTTCAATGCTAAACTAGGCGATTTTGGGTTAGCCTGGCTTG
 
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rJMSF002D21+          TTGACCATGAAAAACCACCCGAAAAAACCTTAGTTGGAGGGACACTAGGGTATGTCGCCC
rJMSF031F10+                                                       TAGGGTACGTCGCCC
                      ____________________________________________________________
consensus             TTGACCATGAAAAACCACCCGAAAAAACCTTAGTTGGAGGGACACTAGGGTATGTCGCCC
 
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rJMSF002D21+          CAGAATGTTATTTCACATTAAAGACTACCAAAGAGTCAGATGTGTATAGTTTTGGAATTG
rJMSF031F10+          CAGAATGTTATCTCACATTAAAGACTACCAAAGAATCAGATGTGTATAGTTTTGGAATTG
                      ____________________________________________________________
consensus             CAGAATGTTATTTCACATTAAAGACTACCAAAGAGTCAGATGTGTATAGTTTTGGAATTG
 
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rJMSF002D21+          TCGCATTAGAAATTGCATGTGGACAAAGAGCAATAATTTCGTTAGATGAACCAGGAGGTT
rJMSF031F10+          TCGCATTAGAAATTGCATGTGGACAAAGAGCAATAGTTTCTGTTGAAGAAACAGAAGATT
rJMSF010D12+                                                                    TT
rJMSF021C06+                              GGACAAAGAGCAATAGTTTCTGTTGAAGAAACAGAAGATT
                      ____________________________________________________________
consensus             TCGCATTAGAAATTGCATGTGGACAAAGAGCAATAGTTTCTGTTGAAGAAACAGAAGATT
 
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rJMSF002D21+          TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATAGAATGGGAAAGGTAATGGAAGCTG
rJMSF031F10+          TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
rJMSF010D12+          TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
rJMSF021C06+          TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
                      ____________________________________________________________
consensus             TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
 
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rJMSF002D21+          CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
rJMSF031F10+          CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
rJMSF010D12+          CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
rJMSF021C06+          CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
                      ____________________________________________________________
consensus             CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
 
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rJMSF002D21+          GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGTCAAGCTTTACATG
rJMSF031F10+          GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
rJMSF010D12+          GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
rJMSF021C06+          GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
                      ____________________________________________________________
consensus             GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
 
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rJMSF002D21+          GTCTTCAATTCCAAGTACAGGTGCCCACCCTTCCATCAGAAATGCCAGTTTACTCAACTT
rJMSF031F10+          GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
rJMSF010D12+          GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
rJMSF021C06+          GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
                      ____________________________________________________________
consensus             GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
 
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rJMSF002D21+          CTTATAATGTGCCATCCTTTTCATGCTTGAGTTCACAGATATTTGAGGGCTATACGAGTC
rJMSF031F10+          CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
rJMSF010D12+          CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
rJMSF021C06+          CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
                      ____________________________________________________________
consensus             CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
 
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rJMSF002D21+          CCAGCA                                                      
rJMSF031F10+          CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
rJMSF010D12+          CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
rJMSF021C06+          CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
                      ____________________________________________________________
consensus             CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
 
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rJMSF031F10+          CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
rJMSF010D12+          CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
rJMSF021C06+          CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
                      ____________________________________________________________
consensus             CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
 
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rJMSF031F10+          AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
rJMSF010D12+          AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
rJMSF021C06+          AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
                      ____________________________________________________________
consensus             AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
 
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rJMSF031F10+          ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
rJMSF010D12+          ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
rJMSF021C06+          ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
                      ____________________________________________________________
consensus             ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
 
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rJMSF031F10+          TATAGTATAAGAACAGTGGTGATTGAAAATTAAATGTAAGAGTGTGAGATACTATTGTAG
rJMSF010D12+          TATAGTATAAGAACAGTGGTGATTGAAGATTAAATGTAAGAGTGTGAGATACTATTGTAG
rJMSF021C06+          TATAGTATAAGAACAGTGGTGATTGAAAATTAAATGTAAGAGTGTGAGATACTATTGTAG
                      ____________________________________________________________
consensus             TATAGTATAAGAACAGTGGTGATTGAAAATTAAATGTAAGAGTGTGAGATACTATTGTAG
 
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rJMSF031F10+          CAGAAGAAGGTTAATTATGT                                        
rJMSF010D12+          CAGAAGAAGGTTAATTATGTTGAGTCTTAAGGTTTTAAGTATAGCTATAGAATTAGTGTG
rJMSF021C06+          CAGAAGAAGGTTAATTATGTTGAGTCTTAAGGTTTTAAGTATAGCTATAGAATTAGTGTG
                      ____________________________________________________________
consensus             CAGAAGAAGGTTAATTATGTTGAGTCTTAAGGTTTTAAGTATAGCTATAGAATTAGTGTG
 
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rJMSF010D12+          TTCTTCCATTATTGTTATTTTTGGCTCTTAAATAGGTCTTTTGTTTGTTGAACAACA   
rJMSF021C06+          TTCTTCCATTATTGTTATTTTTGGCTCTTAAATAGGTCTTTTGTTTGTTGAACAACAATA
                      ____________________________________________________________
consensus             TTCTTCCATTATTGTTATTTTTGGCTCTTAAATAGGTCTTTTGTTTGTTGAACAACAATA