Contig 007099:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020G19Sequence677007099 (2)ref|XP_009783753.1|219PREDICTED: uncharacterized protein LOC104232280 [Nicotiana sylvestris]769007099 (2)ref|XP_009783753.1|258PREDICTED: uncharacterized protein LOC104232280 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF020G19- GGAGCGCCTTTAAAGATTGAATCTTCGAGGCTTTGATGCCTTCT
                      ____________________________________________________________
consensus GGAGCGCCTTTAAAGATTGAATCTTCGAGGCTTTGATGCCTTCT
 
. : . : . : . : . : . :
JMSF020G19- CTTCACTCTGGGTCCTTGAAATGGCGCGCGTTGAGATGGGTCATGTGGTGGATTTGGAAT
                      ____________________________________________________________
consensus CTTCACTCTGGGTCCTTGAAATGGCGCGCGTTGAGATGGGTCATGTGGTGGATTTGGAAT
 
. : . : . : . : . : . :
JMSF020G19- GTGGCGAACACCGCCGCCGGCACTCCTCCGGCGAGGAGCAGCCGGAGGAGGAGGAGGGAA
                      ____________________________________________________________
consensus GTGGCGAACACCGCCGCCGGCACTCCTCCGGCGAGGAGCAGCCGGAGGAGGAGGAGGGAA
 
. : . : . : . : . : . :
JMSF020G19- GCTTCTGTTTCTCTGACGCCGACGAAGGGTCATGTTATTCCCAGTTCTATTCCACGGCCG
rJMSF020G19+ TCTGACGCCGACGAAGGGTCATGTTATTCCCAGTTCTATTCCACGGCCG
                      ____________________________________________________________
consensus GCTTCTGTTTCTCTGACGCCGACGAAGGGTCATGTTATTCCCAGTTCTATTCCACGGCCG
 
. : . : . : . : . : . :
JMSF020G19- ATGGCTCTACCTATGACGACTGTAGCTTCGCCGGTGCGTCTGAGTCTGAGATAGCGGAGA
rJMSF020G19+ ATGGCTCTACCTATGACGACTGTAGCTTCGCCGGTGCGTCTGAGTCTGAGATAGCGGAGA
                      ____________________________________________________________
consensus ATGGCTCTACCTATGACGACTGTAGCTTCGCCGGTGCGTCTGAGTCTGAGATAGCGGAGA
 
. : . : . : . : . : . :
JMSF020G19- CTGTGGACTCCCGGCGAGCTTCGTCGGCGGCGGCGGAGTCCGATTGCTCGGTGGATTTGG
rJMSF020G19+ CTGTGGACTCCCGGCGAGCTTCGTCGGCGGCGGCGGAGTCCGATTGCTCGGTGGATTTGG
                      ____________________________________________________________
consensus CTGTGGACTCCCGGCGAGCTTCGTCGGCGGCGGCGGAGTCCGATTGCTCGGTGGATTTGG
 
. : . : . : . : . : . :
JMSF020G19- AGAAAGGGGTTGGTGAAACCAAGGTGCATTTCGGGAAAATTCAAAGAGATTGTAGGATTT
rJMSF020G19+ AGAAAGGGGTTGGTGAAACCAAGGTGCATTTCGGGAAAATTCAAAGAGATTGTAGGATTT
                      ____________________________________________________________
consensus AGAAAGGGGTTGGTGAAACCAAGGTGCATTTCGGGAAAATTCAAAGAGATTGTAGGATTT
 
. : . : . : . : . : . :
JMSF020G19- GTCATCTCAGCTTCGACAGCTCCGGGCCTGAAACTGGGGTTTCGATTCAACTAGGATGTT
rJMSF020G19+ GTCATCTCAGCTTCGACAGCTCCGGGCCTGAAACTGGGGTTTCGATTCAACTAGGATGTT
                      ____________________________________________________________
consensus GTCATCTCAGCTTCGACAGCTCCGGGCCTGAAACTGGGGTTTCGATTCAACTAGGATGTT
 
. : . : . : . : . : . :
JMSF020G19- CTTGCAAAGGTGATTTAGCTTCTGCTCATAAGCATTGCGCTGAGACTTGGTTCAAAATCA
rJMSF020G19+ CTTGCAAAGGTGATTTAGCTTCTGCTCATAAGCATTGCGCTGAGACTTGGTTCAAAATCA
                      ____________________________________________________________
consensus CTTGCAAAGGTGATTTAGCTTCTGCTCATAAGCATTGCGCTGAGACTTGGTTCAAAATCA
 
. : . : . : . : . : . :
JMSF020G19- AAGGAAATAAGATCTGTGAAATTTGCAACTCTATTGCACGTAACGTTGTTGGTCCAAACG
rJMSF020G19+ AAGGAAATAAGATCTGTGAAATTTGCAACTCTATTGCACGTAACGTTGTTGGTCCAAACG
                      ____________________________________________________________
consensus AAGGAAATAAGATCTGTGAAATTTGCAACTCTATTGCACGTAACGTTGTTGGTCCAAACG
 
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JMSF020G19- ATACTGAGTCATCATTGGAGCTACAAGCAAACGAGATGAATGGTGGTGCGGGCACAAATG
rJMSF020G19+ ATACTGAGTCATCATTGGAGCTACAAGCAAACGAGATGAATGGTGGTGCGGGCACAAATG
                      ____________________________________________________________
consensus ATACTGAGTCATCATTGGAGCTACAAGCAAACGAGATGAATGGTGGTGCGGGCACAAATG
 
. : . : . : . : . : . :
JMSF020G19- CAGCCACGGGAACATCTTCTTCCTCCACTTCTG
rJMSF020G19+ CAGCCACGGGAACATCTTCTTCCTCCACTTCTGAGGCCCGAAGTTGCTGGGGTGGGCAGA
                      ____________________________________________________________
consensus CAGCCACGGGAACATCTTCTTCCTCCACTTCTGAGGCCCGAAGTTGCTGGGGTGGGCAGA
 
. : . : . : . : . : . :
rJMSF020G19+ AGTTCTTCAACTTCCTCTTAGCTTGTATGGTATTCGCGTTCGTCATCTCATGGCTCTTCC
                      ____________________________________________________________
consensus AGTTCTTCAACTTCCTCTTAGCTTGTATGGTATTCGCGTTCGTCATCTCATGGCTCTTCC
 
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rJMSF020G19+ ACTTTAACGCCCCTTCGTAGGCTGGCAGTGAAGTAACGACCTCACGGAGATGATCGTGAG
                      ____________________________________________________________
consensus ACTTTAACGCCCCTTCGTAGGCTGGCAGTGAAGTAACGACCTCACGGAGATGATCGTGAG
 
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rJMSF020G19+ CTCGCAAAGGCTTTCAGCGTCGCTTTGTTGATACGTACCTCTCGATACAAATGTAGGTTA
                      ____________________________________________________________
consensus CTCGCAAAGGCTTTCAGCGTCGCTTTGTTGATACGTACCTCTCGATACAAATGTAGGTTA
 
. : . : . : . : . : . :
rJMSF020G19+ GAAAGTAGAAACTCAGCATTATTGAATTGCCAGTTTACTAGTGTACTGCAACTACATTTC
                      ____________________________________________________________
consensus GAAAGTAGAAACTCAGCATTATTGAATTGCCAGTTTACTAGTGTACTGCAACTACATTTC