Contig 007097:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016B17Sequence225010639 (2)710007097 (2)ref|XP_009593761.1|1e-47PREDICTED: probable WRKY transcription factor 65 isoform X1 [Nicotiana tomentos
JMSF020F01Sequence690010639 (2)ref|XP_009802037.1|8e-62PREDICTED: probable WRKY transcription factor 69 isoform X2 [Nicotiana sylvestr564007097 (2)ref|XP_010323673.1|1e-22PREDICTED: probable WRKY transcription factor 69 isoform X3 [Solanum lycopersic

Alignment

This contig is upended


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rJMSF016B17+                                                                     T
                      ____________________________________________________________
consensus                                                                        T
 
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rJMSF016B17+          TNTTNNTNNNGGNGNAAGTANGNNCAAAAANNCATTAAAGGNTNCCNTTATNCCAGGGGA
                      ____________________________________________________________
consensus             TNTTNNTNNNGGNGNAAGTANGNNCAAAAANNCATTAAAGGNTNCCNTTATNCCAGGGGA
 
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rJMSF016B17+          TATTATNGATNTAGCAGNTCAAAAGGATGTCCAGNTAGGAAACAAGTTGAACGTAGCCGC
                      ____________________________________________________________
consensus             TATTATNGATNTAGCAGNTCAAAAGGATGTCCAGNTAGGAAACAAGTTGAACGTAGCCGC
 
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rJMSF016B17+          CTGGACCCCACCATGCTCCTCATCACCTACTCCTNTGACCACAACCACCCTCTCCCCACC
rJMSF020F01+                                                 CACAACCACCCTNTCCCCACC
                      ____________________________________________________________
consensus             CTGGACCCCACCATGCTCCTCATCACCTACTCCTNTGACCACAACCACCCTCTCCCCACC
 
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rJMSF016B17+          AAAACCCACCACCATTACGCCGCCGCCGCCGCCGCTACCACCACCACTTCCGCCGCCACG
rJMSF020F01+          AAAACCCACCACCATTACGCCGCCGCCGCCGCCGCTACCACCACCACTTCCGCCGCCACG
                      ____________________________________________________________
consensus             AAAACCCACCACCATTACGCCGCCGCCGCCGCCGCTACCACCACCACTTCCGCCGCCACG
 
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rJMSF016B17+          ACGCCTACTGATTCCGCCGCGGATCACCCCGGCTCGCCCAAGCCGGAGCTGGCCATCTTC
rJMSF020F01+          ACGCCTANTGATTCCGCCGCGGATCACCCCGGCTCGCCCAAGCCGGAGCTGGCCATTTTN
                      ____________________________________________________________
consensus             ACGCCTACTGATTCCGCCGCGGATCACCCCGGCTCGCCCAAGCCGGAGCTGGCCATTTTC
 
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rJMSF016B17+          GCCGACCCGGACCCGGAGAACAACAGCTTCCCGGAGCTCGCCGCCGGCGAGATGGGGTGG
rJMSF020F01+          GCCGACCCGGACCCGGAGAACAACAGCTTCCCGGAGCTNGCCGCCGGCGAGATGGGGTGG
                      ____________________________________________________________
consensus             GCCGACCCGGACCCGGAGAACAACAGCTTCCCGGAGCTCGCCGCCGGCGAGATGGGGTGG
 
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rJMSF016B17+          TTCTCCGACGTGGGGTCCTGCTGTTTTATGGAGAGCGCGGCGTTTGCGGCGGGGCCCACG
rJMSF020F01+          TTTTCCGACGTGGGGTCCTGCTGTTTTATGGAGAGCGCGGCGTTTGCGGCGGGGCCCACG
                      ____________________________________________________________
consensus             TTTTCCGACGTGGGGTCCTGCTGTTTTATGGAGAGCGCGGCGTTTGCGGCGGGGCCCACG
 
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rJMSF016B17+          GTTTGTCACGACACCGACGTGGCGCTCACGTTGCCTATTGGGGAAGAGGACCAGTCGTTG
rJMSF020F01+          GTTTGTCACGACACCGACGTGGCGCTCACGTTGCCTATTAGGGAAGAGGACCAGTCGTTG
                      ____________________________________________________________
consensus             GTTTGTCACGACACCGACGTGGCGCTCACGTTGCCTATTGGGGAAGAGGACCAGTCGTTG
 
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rJMSF016B17+          TTCGGCGATCTGGGCGAGCTGCCGGAGTGTTCGGTGGTGTTCCGGCGGTGTAGAGTGGAA
rJMSF020F01+          TTNGGCGGTNTGGGCGAGCTGCCGGAGTGTTCGGTGGTGTTCCGGCGGTGTAGAGTGGAA
                      ____________________________________________________________
consensus             TTCGGCGGTCTGGGCGAGCTGCCGGAGTGTTCGGTGGTGTTCCGGCGGTGTAGAGTGGAA
 
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rJMSF016B17+          ACGCCGTGCTTTGCCGGCACCGGATAAGATTGGGGAACAGTAACATGGGACATTGTTTAG
rJMSF020F01+          ACGCCGTGCTTTGCCGGCACCGGATAAGATTGGGGAACAGTAACATGGGACATTGTTTAG
                      ____________________________________________________________
consensus             ACGCCGTGCTTTGCCGGCACCGGATAAGATTGGGGAACAGTAACATGGGACATTGTTTAG
 
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rJMSF016B17+          GGAGTCAGATTTCCACGGCGAAGAATAAAATTCTGCCACGTGGCCCCCCTGTTGCGCCAC
rJMSF020F01+          GGAGTCAGATTTCCACGGCGAAGAATAAAATTNTGCCACGTGGCCCCCCTGTTGCGCCAC
                      ____________________________________________________________
consensus             GGAGTCAGATTTCCACGGCGAAGAATAAAATTCTGCCACGTGGCCCCCCTGTTGCGCCAC
 
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rJMSF016B17+          ATTATGCGGAGAGATTTTAACTCTTAGTGGACATTTTTCTCTTTTTTAT           
rJMSF020F01+          ATTATGCGGAGAGATTTTAACTCTTAGTGGACATTTTTCTCTTTTTTATTTTATTTTATT
                      ____________________________________________________________
consensus             ATTATGCGGAGAGATTTTAACTCTTAGTGGACATTTTTCTCTTTTTTATTTTATTTTATT