Contig 007096:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020A16Sequence643007096 (2)gb|ACU23203.1|3e-116unknown [Glycine max]797007096 (2)ref|XP_002284629.1|155PREDICTED: uncharacterized protein LOC100250176 [Vitis vinifera]

Alignment

This contig is upended


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JMSF020A16-                        GGCTCTGAGAGCACAAAAGAGTCTGACCACCATTACTCCAAGCTCTG
                      ____________________________________________________________
consensus                          GGCTCTGAGAGCACAAAAGAGTCTGACCACCATTACTCCAAGCTCTG
 
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JMSF020A16-           AAGAAGTAAGAGCTTATTTCCGAAAGGAAGAAGTCCTCAGGTATTCCATCCCAGACAGGG
                      ____________________________________________________________
consensus             AAGAAGTAAGAGCTTATTTCCGAAAGGAAGAAGTCCTCAGGTATTCCATCCCAGACAGGG
 
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JMSF020A16-           CCTTCTCTTACACAGCTATTGATGGGAAAAAGTCAATTGTTGCCCCATTGAGAAGGTGTG
                      ____________________________________________________________
consensus             CCTTCTCTTACACAGCTATTGATGGGAAAAAGTCAATTGTTGCCCCATTGAGAAGGTGTG
 
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JMSF020A16-           GCGGCAAGCCAACATCAAAAGCTCGAGACCACTTTATGCTCAAACGGGATAGACCTCCTC
                      ____________________________________________________________
consensus             GCGGCAAGCCAACATCAAAAGCTCGAGACCACTTTATGCTCAAACGGGATAGACCTCCTC
 
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JMSF020A16-           ATGTTACGATTCTGTGTCTTGTGCGAGATGCAGCTGCAAGGTTGCCCGGTAGTATTGGGA
                      ____________________________________________________________
consensus             ATGTTACGATTCTGTGTCTTGTGCGAGATGCAGCTGCAAGGTTGCCCGGTAGTATTGGGA
 
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JMSF020A16-           CTAGAGCTGATGTGTGTACTCTAATCAGAGATTCACAGTACATTGTTGAAGACGTGTCTG
                      ____________________________________________________________
consensus             CTAGAGCTGATGTGTGTACTCTAATCAGAGATTCACAGTACATTGTTGAAGACGTGTCTG
 
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JMSF020A16-           ATGGACAGGTGAATCAAGTTGTTAGTGGCGCACTGGATCGTTTGCATTATGAACGCGATC
rJMSF020A16+                                                     GCATTATGAACGCGATC
                      ____________________________________________________________
consensus             ATGGACAGGTGAATCAAGTTGTTAGTGGCGCACTGGATCGTTTGCATTATGAACGCGATC
 
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JMSF020A16-           CATGTGTACAGTTTGATACGGATAGGAAACTGTGGGTGTATTTACATCGAGAAAGGGAAG
rJMSF020A16+          CATGTGTACAGTTTGATACGGATAGGAAACTGTGGGTGTATTTACATCGAGAAAGGGAAG
                      ____________________________________________________________
consensus             CATGTGTACAGTTTGATACGGATAGGAAACTGTGGGTGTATTTACATCGAGAAAGGGAAG
 
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JMSF020A16-           AAGAAGATTTTGAGGATGATGGGACTTCATCCACAAAGAAGTGGAAGAGGCAAAAGAAGG
rJMSF020A16+          AAGAAGATTTTGAGGATGATGGGACTTCATCCACAAAGAAGTGGAAGAGGCAAAAGAAGG
                      ____________________________________________________________
consensus             AAGAAGATTTTGAGGATGATGGGACTTCATCCACAAAGAAGTGGAAGAGGCAAAAGAAGG
 
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JMSF020A16-           AATCCGCTGAGCCTATTGACCAAGCGGCTGTAACTGTTGCTTATCATGGAGCTGGAGATC
rJMSF020A16+          AATCCGCTGAGCCTATTGACCAAGCGGCTGTAACTGTTGCTTATCATGGAGCTGGAGATC
                      ____________________________________________________________
consensus             AATCCGCTGAGCCTATTGACCAAGCGGCTGTAACTGTTGCTTATCATGGAGCTGGAGATC
 
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JMSF020A16-           AAAATGTTGGTGACTTGGGCTCCGATCCCAACTTTGATCTGCCAAATATTCACGAA    
rJMSF020A16+          AAAATGTTGGTGACTTGGGCTCCGATCCCAACTTTGATCTGCCAAATATTCACGAAGATA
                      ____________________________________________________________
consensus             AAAATGTTGGTGACTTGGGCTCCGATCCCAACTTTGATCTGCCAAATATTCACGAAGATA
 
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rJMSF020A16+          AAGGGAAGGAGCTTGAATATGAGGATTCTCGGGATCTTGGTGATGACAATGTTGAGAACC
                      ____________________________________________________________
consensus             AAGGGAAGGAGCTTGAATATGAGGATTCTCGGGATCTTGGTGATGACAATGTTGAGAACC
 
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rJMSF020A16+          ACCATGGAACAGAACAAGGTAACCCTCCAGATTTTGGGCAGACCCAAGCGGCGTCGGATG
                      ____________________________________________________________
consensus             ACCATGGAACAGAACAAGGTAACCCTCCAGATTTTGGGCAGACCCAAGCGGCGTCGGATG
 
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rJMSF020A16+          CTATGGGGGAAAACAAATTGTTCTGTCAAGAGAATTCTACAAATGACAATTTTGATGATG
                      ____________________________________________________________
consensus             CTATGGGGGAAAACAAATTGTTCTGTCAAGAGAATTCTACAAATGACAATTTTGATGATG
 
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rJMSF020A16+          AAACATAGAACCAAAACCACCTCACTGGCTCGAGCTTCTCGGTGTGCCATGGCGATCGAA
                      ____________________________________________________________
consensus             AAACATAGAACCAAAACCACCTCACTGGCTCGAGCTTCTCGGTGTGCCATGGCGATCGAA
 
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rJMSF020A16+          TGCTGCTAGAAGTGAACATCCCTTGTTTTAGCACATCACTTCAAATGTTTTCTCCTTTCT
                      ____________________________________________________________
consensus             TGCTGCTAGAAGTGAACATCCCTTGTTTTAGCACATCACTTCAAATGTTTTCTCCTTTCT
 
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rJMSF020A16+          GTTCCCCATTGGAGGAATTTAAATCATGAGATATACCCTTAAGAAATGAAAGATGATGAT
                      ____________________________________________________________
consensus             GTTCCCCATTGGAGGAATTTAAATCATGAGATATACCCTTAAGAAATGAAAGATGATGAT
 
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rJMSF020A16+          GATGTATCAGCCCTTCTCTGCTTAATAGGGAGAAACAAACATTCCATCAGAATAGTAGTC
                      ____________________________________________________________
consensus             GATGTATCAGCCCTTCTCTGCTTAATAGGGAGAAACAAACATTCCATCAGAATAGTAGTC
 
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rJMSF020A16+          TGTTAATATTATCTTGATGGATAAGTACAATAAAGAAATTTTGCATTTCGTCAATCTTTT
                      ____________________________________________________________
consensus             TGTTAATATTATCTTGATGGATAAGTACAATAAAGAAATTTTGCATTTCGTCAATCTTTT
 
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rJMSF020A16+          TATATTGTGTTATTTGTTACCATAACCCCCTCCCTCGGTATTCAAAAGAACATACATATT
                      ____________________________________________________________
consensus             TATATTGTGTTATTTGTTACCATAACCCCCTCCCTCGGTATTCAAAAGAACATACATATT