Contig 007095:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019P16Sequence445005203 (2)ref|XP_007049697.1|2e-10Uncharacterized protein TCM_002832 [Theobroma cacao] gb|EOX93854.1| Uncharacteri764007095 (2)ref|XP_009791763.1|138PREDICTED: uncharacterized protein LOC104238943 [Nicotiana sylvestris]
JMSF035O20Sequence582005203 (2)emb|CDP03908.1|9e-12unnamed protein product [Coffea canephora]393007095 (2)gb|KJB08804.1|2e-06hypothetical protein B456_001G104900 [Gossypium raimondii]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019P16+                          TGAATGCTNGTGCACACAAAGAATTGGTGGGGGAGTTGGAAAGC
                      ____________________________________________________________
consensus                             TGAATGCTNGTGCACACAAAGAATTGGTGGGGGAGTTGGAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019P16+          ATGGGTAGTGTGAAAGACCAGAAGAAAGTGGAGGCACANGGCACGAATGCCGATAAAGTG
                      ____________________________________________________________
consensus             ATGGGTAGTGTGAAAGACCAGAAGAAAGTGGAGGCACANGGCACGAATGCCGATAAAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019P16+          GTTGAAAACTTAAAGGTAAGAAATGGATCCAAGGACGAGGAGACAATCGTCAACAAAACA
                      ____________________________________________________________
consensus             GTTGAAAACTTAAAGGTAAGAAATGGATCCAAGGACGAGGAGACAATCGTCAACAAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019P16+          AAAACAAAAACAAAAACATCAATCCCAAGAAACGATTCTCAGAGTCTGAAAGTGGAGAGT
                      ____________________________________________________________
consensus             AAAACAAAAACAAAAACATCAATCCCAAGAAACGATTCTCAGAGTCTGAAAGTGGAGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+                                                     GAAAGGAAAAAGAGTGG
rJMSF019P16+          TCAAGAACACTGGATTACAATCTTGCTCACAATGGCTCCATGAGAAAGGAAAAAGAGTGG
                      ____________________________________________________________
consensus             TCAAGAACACTGGATTACAATCTTGCTCACAATGGCTCCATGAGAAAGGAAAAAGAGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+          AAAAGGACACTGGCGNGCANGCTNTANGNGGAGAGGNACACTAGAGATNTGNGTGGTGAA
rJMSF019P16+          AAAAGGACACTGGCGTGCAAGCTGTACGAGGAGAGGAACACTAGAGATGTGAGTGGTGAA
                      ____________________________________________________________
consensus             AAAAGGACACTGGCGTGCAAGCTGTACGAGGAGAGGAACACTAGAGATGTGAGTGGTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+          GGGATGGATTTNTTNTGGGANACATACGANATNGAGGCCNTAAAGAGCANGAAGATGGAG
rJMSF019P16+          GGGATGGATTTGTTGTGGGAAACATACGAAATGGAGGCCATAAAGAGCAAGAAGATGGAG
                      ____________________________________________________________
consensus             GGGATGGATTTGTTGTGGGAAACATACGAAATGGAGGCCATAAAGAGCAAGAAGATGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+          TCGAAGAAGAAGGCGANGANAAAATGGGNNAGCANGAGATATATTANTANGAAGGTGGAG
rJMSF019P16+          TCGAAGAAGAAGGCGAAGAAAAAATGGGAAAGCAAGAGATATAATAATAAGAAGGTGGAG
                      ____________________________________________________________
consensus             TCGAAGAAGAAGGCGAAGAAAAAATGGGAAAGCAAGAGATATATTAATAAGAAGGTGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+          AGTGAGGNTGAAGAAGANGAAGAAGAAGAGGAAGTGTNTGATCNCCTGTGTNNTTTGCAN
rJMSF019P16+          AGTGAGGATGAAGAAGAAGAAGAAGAAGAGGAAGTGTATGATCAGCTGTGTTGTTTGCAG
                      ____________________________________________________________
consensus             AGTGAGGATGAAGAAGAAGAAGAAGAAGAGGAAGTGTATGATCAGCTGTGTTGTTTGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+          GCCCTCACGTTNTCNNCTNGGAAAGTGAACTNGGGAATGGGAATTGGAAAGCCNANTCTT
rJMSF019P16+          GCCCTCAAGTTCTCAGCTGGGAAAGTGAACTTGGGAATGGGAATTGGAAAGCCTAATCTT
                      ____________________________________________________________
consensus             GCCCTCACGTTCTCAGCTGGGAAAGTGAACTTGGGAATGGGAATTGGAAAGCCTAATCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+          NTGANGATTTCNAAGGCTATCNAAGGTTTTGGANGGNTTCNTCANGTTAGCACCANGCAC
rJMSF019P16+          ATGAAGATTTCAAAGGCTATCAAAGGTTTTGGATGGCTTCATCATGTTAGCAGCAAGCAC
                      ____________________________________________________________
consensus             ATGAAGATTTCAAAGGCTATCAAAGGTTTTGGATGGCTTCATCATGTTAGCAGCAAGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035O20+          ACCANGAAGGTGCACA                                            
rJMSF019P16+          AGCAAGAAGGTGCACATTGAAGACAGGTTATAATAATAATAATCAAATTTAATTTTGGTT
                      ____________________________________________________________
consensus             AGCAAGAAGGTGCACATTGAAGACAGGTTATAATAATAATAATCAAATTTAATTTTGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019P16+          CCTTAGCTTCCATCTTCATCATGCATGTATTTGCTTCCAACTAAATCTCAACCAAGTATA
                      ____________________________________________________________
consensus             CCTTAGCTTCCATCTTCATCATGCATGTATTTGCTTCCAACTAAATCTCAACCAAGTATA