Contig 007094:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009P18Sequence588007094 (5)ref|XP_004307190.1|2e-60PREDICTED: tubulin-folding cofactor A [Fragaria vesca subsp. vesca] ref|XP_0043684007094 (5)ref|XP_004307190.1|6e-60PREDICTED: tubulin-folding cofactor A [Fragaria vesca subsp. vesca] ref|XP_0043
JMFN012J01Sequence608007094 (5)ref|XP_004307190.1|2e-60PREDICTED: tubulin-folding cofactor A [Fragaria vesca subsp. vesca] ref|XP_0043
JMSF019O05Sequence491007094 (5)ref|XP_004307190.1|5e-61PREDICTED: tubulin-folding cofactor A [Fragaria vesca subsp. vesca] ref|XP_0043661007094 (5)ref|XP_004307190.1|3e-60PREDICTED: tubulin-folding cofactor A [Fragaria vesca subsp. vesca] ref|XP_0043

Alignment

This contig is upended


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rJMFF009P18-                                         AACTTTGACATGATGAGCAGTCAGAGTAA
rJMSF019O05-                                                                     A
                      ____________________________________________________________
consensus                                            AACTTTGACATGATGAGCAGTCAGAGTAA
 
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rJMFF009P18-          ATGATGTTGTTTTACACAATAAGCCATCACAGTTGATGAACACTCCATGGCCATTACATA
JMFN012J01+                                                             CCATTACATA
rJMSF019O05-          ATGATGTTGTTTTACACAATAAGCCATCACAGTTGATGAACACTCCATGGCCATTACATA
                      ____________________________________________________________
consensus             ATGATGTTGTTTTACACAATAAGCCATCACAGTTGATGAACACTCCATGGCCATTACATA
 
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JMFF009P18+                  GCACAATGAAAATTGTCATGATGGATGATGAACATTCAGTTACAAAATCACAC
rJMFF009P18-          TTGTCTTGCACAATGAAAATTGTCATGATGGATGATGAACATTCAGTTACAAAATCACAC
JMFN012J01+           TTGTCTTGCACAATGAAAATTGTCATGATGGATGATGAACATTCAGTTACAAAATCACAC
rJMSF019O05-          TTGTCTTGCACAATGAAAATTGTCATGATGGATGATGAACATTCAGTTACAAAATCACAC
                      ____________________________________________________________
consensus             TTGTCTTGCACAATGAAAATTGTCATGATGGATGATGAACATTCAGTTACAAAATCACAC
 
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JMFF009P18+           ATTATCATGAGCTGTAGAAAGCTTAAAACATGACATCCAGAAAGCAAGGCGGCGAGACTT
rJMFF009P18-          ATTATCATGAGCTGTAGAAAGCTTAAAACATGACATCCAGAAAGCAAGGCGGCGAGACTT
JMFN012J01+           ATTATCATGAGCTGTAGAAAGCTTAAAACATGACATCCAGAAAGCAAGGCGGCGAGACTT
JMSF019O05+                                                            CGGCGAGACTT
rJMSF019O05-          ATTATCATGAGCTGTAGAAAGCTTAAAACATGACATCCAGAAAGCAAGGCGGCGAGACTT
                      ____________________________________________________________
consensus             ATTATCATGAGCTGTAGAAAGCTTAAAACATGACATCCAGAAAGCAAGGCGGCGAGACTT
 
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JMFF009P18+           TCGTACGCTATGCTTCTGTACTTTGAAGCACCTGTTCAACCTCGGTTATGACTTTTTGAG
rJMFF009P18-          TCGTACGCTATGCTTCTGTACTTTGAAGCACCTGTTCAACCTCGGTTATGACTTTTTGAG
JMFN012J01+           TCGTACGCTATGCTTCTGTACTTTGAAGCACCTGTTCAACCTCGGTTATGACTTTTTGAG
JMSF019O05+           TCGTACGCTATGCTTCTGTACTTTGAAGCACCTGTTCAACCTCGGTTATGACTTTTTGAG
rJMSF019O05-          TCGTACGCTATGCTTCTGTACTTTGAAGCACCTGTTCAACCTCGGTTATGACTTTTTGAG
                      ____________________________________________________________
consensus             TCGTACGCTATGCTTCTGTACTTTGAAGCACCTGTTCAACCTCGGTTATGACTTTTTGAG
 
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JMFF009P18+           CTTCTTCAACCTCGGGGCCTTCTTTTTGGTTCAACTCCTCTTCGATCTCAACCAGGGTTC
rJMFF009P18-          CTTCTTCAACCTCGGGGCCTTCTTTTTGGTTCAACTCCTCTTCGATCTCAACCAGGGTTC
JMFN012J01+           CTTCTTCAACCTCGGGGCCTTCTTTTTGGTTCAACTCCTCTTCGATCTCAACCAGGGTTC
JMSF019O05+           CTTCTTCAACCTCGGGGCCTTCTTTTTGGTTCAACTCCTCTTCGATCTCAACCAGGGTTC
rJMSF019O05-          CTTCTTCAACCTCGGGGCCTTCTTTTTGGTTCAACTCCTCTTCGATCTCAACCAGGGTTC
                      ____________________________________________________________
consensus             CTTCTTCAACCTCGGGGCCTTCTTTTTGGTTCAACTCCTCTTCGATCTCAACCAGGGTTC
 
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JMFF009P18+           CTTTAAGGTCAGTCAGTGCAGCTTCTAAACGCTTGTGGCAATCGGGTATCATCATTCTGG
rJMFF009P18-          CTTTAAGGTCAGTCAGTGCAGCTTCTAAACGCTTGTGGCAATCGGGTATCATCATTCTGG
JMFN012J01+           CTTTAAGGTCAGTCAGTGCAGCTTCTAAACGCTTGTGGCAATCGGGTATCATCATTCTGG
JMSF019O05+           CTTTAAGGTCAGTCAGTGCAGCTTCTAAACGCTTGTGGCAATCGGGTATCATCATTCTGG
rJMSF019O05-          CTTTAAGGTCAGTCAGTGCAGCTTCTAAACGCTTGTGGCAATCGGGTATCATCATTCTGG
                      ____________________________________________________________
consensus             CTTTAAGGTCAGTCAGTGCAGCTTCTAAACGCTTGTGGCAATCGGGTATCATCATTCTGG
 
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JMFF009P18+           ATTCAGCCAGCACGTTTTCCTGTTGTTTGAGGTCATATGGATCGGCGCCTTTAGCCTTCA
rJMFF009P18-          ATTCAGCCAGCACGTTTTCCTGTTGTTTGAGGTCATATGGATCGGCGCCTTTAGCCTTCA
JMFN012J01+           ATTCAGCCAGCACGTTTTCCTGTTGTTTGAGGTCATATGGATCGGCGCCTTTAGCCTTCA
JMSF019O05+           ATTCAGCCAGCACGTTTTCCTGTTGTTTGAGGTCATATGGATCGGCGCCTTTAGCCTTCA
rJMSF019O05-          ATTCAGCCAGCACGTTTTCCTGTTGTTTGAGGTCATATGGATCGGCGCCTTTAGCCTTCA
                      ____________________________________________________________
consensus             ATTCAGCCAGCACGTTTTCCTGTTGTTTGAGGTCATATGGATCGGCGCCTTTAGCCTTCA
 
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JMFF009P18+           TATCAGCGGTCTTGGCGGATTCTCTCTCCACCTCCTTCTCGTAGGAGTGCAGCTCCTTCA
rJMFF009P18-          TATCAGCGGTCTTGGCGGATTCTCTCTCCACCTCCTTCTCGTAGGAGTGCAGCTCCTTCA
JMFN012J01+           TATCAGCGGTCTTGGCGGATTCTCTCTCCACCTCCTTCTCGTAGGAGTGCAGCTCCTTCA
JMSF019O05+           TATCAGCGGTCTTGGCGGATTCTCTCTCCACCTCCTTCTCGTAGGAGTGCAGCTCCTTCA
rJMSF019O05-          TATCAGCGGTCTTGGCGGATTCTCTCTCCACCTCCTTCTCGTAGGAGTGCAGCTCCTTCA
                      ____________________________________________________________
consensus             TATCAGCGGTCTTGGCGGATTCTCTCTCCACCTCCTTCTCGTAGGAGTGCAGCTCCTTCA
 
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JMFF009P18+           CTATGCGTTTGCAAGTCGACGTCTTGATCTTCAGATTCCTAAGCGTCGCAGCCATTGTCA
rJMFF009P18-          CTATGCGTTTGCAAGTCGACGTCTTGATCTTCAGATTCCTAAGCGTCGCAGCCATTGTCA
JMFN012J01+           CTATGCGTTTGCAAGTCGACGTCTTGATCTTCAGATTCCTAAGCGTCGCAGCCATTGTCA
JMSF019O05+           CTATGCGTTTGCAAGTCGACGTCTTGATCTTCAGATTCCTAAGCGTCGCAGCCATTGTCA
rJMSF019O05-          CTATGCGTTTGCAAGTCGACGTCTTGATCTTCAGATTCCTAAGCGTCGCAGCCATTGTCA
                      ____________________________________________________________
consensus             CTATGCGTTTGCAAGTCGACGTCTTGATCTTCAGATTCCTAAGCGTCGCAGCCATTGTCA
 
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JMFF009P18+           ATCTTTAGTACTAGCTTCTTCGTCGCAGGGGTGGGCGGGCCGCGACAGCAGCAACGTCGG
rJMFF009P18-          ATCTTTAGTACTAGCTTCTTCGTCGCAGGGGTGGGCGGGCCGCGACAGCAGCAACGTCGG
JMFN012J01+           ATCTTTAGTACTAGCTTCTTCGTCGCAGGGGTGGGCGGGCCGCGACAGCAGCAACGTCGG
JMSF019O05+           ATCTTTAGTACTAGCTTCTTCGTCGCAGGGGTGGGCGGGCCGCGACAGCAGCAACGTCGG
rJMSF019O05-          ATCTTTAGTACTAGCTTCTTCGTCGCAGGGGTGGGCGGGCCGCGACAGCAGCAACGTCGG
                      ____________________________________________________________
consensus             ATCTTTAGTACTAGCTTCTTCGTCGCAGGGGTGGGCGGGCCGCGACAGCAGCAACGTCGG
 
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JMFF009P18+           CTTGTAGCTTATTCGCGTCGTCGGATGCTCGGAGTTGCGATAGACAGTCAAAGAC     
rJMFF009P18-          CTTGTAGCTTATTCGCGTCGTCGGATGCTCGGAGTTGCGATAGACAGTCAAAGAC     
JMFN012J01+           CTTGTAGCTTATTCGCGTCGTCGGATGCTCGGAGTTGCGATAGACAGTCAGAGAC     
JMSF019O05+           CTTGTAGCTTATTCGCGTCGTCGGATGCTCGGAGTTGCGATAGACAGTCAGAGAC     
rJMSF019O05-          CTTGTAGCTTATTCGCGTCGTCGGATGCTCGGAGTTGCGATAGACAGTCAGAGACGCAGA
                      ____________________________________________________________
consensus             CTTGTAGCTTATTCGCGTCGTCGGATGCTCGGAGTTGCGATAGACAGTCAGAGACGCAGA