Contig 007087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018H05Sequence764007087 (3)ref|XP_011072209.1|2e-50PREDICTED: protein HAPLESS 2 [Sesamum indicum]
JMSF018I05Sequence551007995 (3)ref|XP_009630067.1|2e-33PREDICTED: protein HAPLESS 2-like [Nicotiana tomentosiformis]780007087 (3)ref|XP_011072209.1|5e-52PREDICTED: protein HAPLESS 2 [Sesamum indicum]
JMSF039B09Sequence661007995 (3)ref|XP_009782610.1|2e-53PREDICTED: protein HAPLESS 2 isoform X2 [Nicotiana sylvestris]796007087 (3)ref|XP_011072209.1|5e-65PREDICTED: protein HAPLESS 2 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF039B09+                      TGATTTTGGTGAAGTTGATCGAGCAGAGTGTCAATTCACAACAACTGC
                      ____________________________________________________________
consensus                         TGATTTTGGTGAAGTTGATCGAGCAGAGTGTCAATTCACAACAACTGC
 
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rJMSF039B09+          TACTGTTTTTGATAACGGATCACAGATACCATTCCAACCCCCCAAGACAAGCATACATGG
rJMSF018I05+                TTTTGATAACGGATCACAGATACCATTCCAACCCCCCAAGACAAGCATACATGG
rJMSF018H05+                          GGATCACAGATACCATTCCAACCCCCCANGACAAGCATACATGG
                      ____________________________________________________________
consensus             TACTGTTTTTGATAACGGATCACAGATACCATTCCAACCCCCCAAGACAAGCATACATGG
 
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rJMSF039B09+          TTTCTTTGAAACAATCGAAGAATTGTGGAACAAGTTGTGGGAAGGTTTGGTGGATTTTCT
rJMSF018I05+          TTTCTTTGAAACAATCGAAGAATTGTGGAACAAGTTGTGGGAAGGTTTGGTGGATTTTCT
rJMSF018H05+          TTTCTTTGAAACAATCGAAGAATTGTGGAACAAGTTGTGGGAAGGTTTGGTGGATTTTCT
                      ____________________________________________________________
consensus             TTTCTTTGAAACAATCGAAGAATTGTGGAACAAGTTGTGGGAAGGTTTGGTGGATTTTCT
 
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rJMSF039B09+          CACAGGAGAAAGCTGCAGAAGGAACTGCTCTGGGATTTTTGATGTGGGCTGTCATGTGCA
rJMSF018I05+          CACAGGAGAAAGCTGCAGAAGGAACTGCTCTGGGATTTTTGATGTGGGCTGTCATGTGCA
rJMSF018H05+          CACAGGAGAAAGCTGCAGAAGGAACTGCTCTGGGATTTTTGATGTGGGCTGTCATGTGCA
                      ____________________________________________________________
consensus             CACAGGAGAAAGCTGCAGAAGGAACTGCTCTGGGATTTTTGATGTGGGCTGTCATGTGCA
 
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rJMSF039B09+          GTACATTTGTATGAATTGGATAGTTTTGGTTGCTCTATTCGCAGCAATCTTTCCAACTTT
rJMSF018I05+          GTACATTTGTATGAATTGGATAGTTTTGGTTGCTCTATTCGCAGCAATCTTTCCAACTTT
rJMSF018H05+          GTACATTTGTATGAATTGGATAGTTTTGGTTGCTCTATTCGCAGCAATCTTTCCAACTTT
                      ____________________________________________________________
consensus             GTACATTTGTATGAATTGGATAGTTTTGGTTGCTCTATTCGCAGCAATCTTTCCAACTTT
 
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rJMSF039B09+          GGTTGTGCTTGTTTGGCTTCTGCATCAGAAAGGGATATTTGATCCTATATATGACTGGTG
rJMSF018I05+          GGTTGTGCTTGTTTGGCTTCTGCATCAGAAAGGGATATTTGATCCTATATATGACTGGTG
rJMSF018H05+          GGTTGTGCTTGTTTGGCTTCTGCATCAGAAAGGGATATTTGATCCTATATATGACTGGTG
                      ____________________________________________________________
consensus             GGTTGTGCTTGTTTGGCTTCTGCATCAGAAAGGGATATTTGATCCTATATATGACTGGTG
 
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rJMSF039B09+          GGAAGATCACTTTTCAGTCCCTAAAGGGAGCAGGAGTTCATTGATGCACCATTCCAATCC
rJMSF018I05+          GGAAGATCACTTTTCAGTCCCTAAAGGGAGCAGGAGTTCATTGATGCACCATTCCAATCC
rJMSF018H05+          GGAAGATCACTTTTCAGTCCCTAAAGGGAGCAGGAGTTCATTGATGCACCATTCCAATCC
                      ____________________________________________________________
consensus             GGAAGATCACTTTTCAGTCCCTAAAGGGAGCAGGAGTTCATTGATGCACCATTCCAATCC
 
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rJMSF039B09+          TCATCAGCTAAAACTTCACTTAAAGAGACACCACCATAAGCACCATGAAACAAGACATCA
rJMSF018I05+          TCATCAGCTAAAACTTCACTTAAAGAGACACCACCATAAGCACCATGAAACAAGACATCA
rJMSF018H05+          TCATCAGCTAAAACTTCACTTAAAGAGACACCACCATAAGCACCATGAAACAAGACATCA
                      ____________________________________________________________
consensus             TCATCAGCTAAAACTTCACTTAAAGAGACACCACCATAAGCACCATGAAACAAGACATCA
 
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rJMSF039B09+          TCATCATCATCATCATAAGCACCAAAGGAGAACATCTACTCACCATCCATCTGGCGAAGC
rJMSF018I05+          TCATCATCATCATCATAAGCACCAAAGGAGAACATCTACTCACCATCCATCTGGCGAAGC
rJMSF018H05+          TCATCATCATCATCATAAGCACCAAAGGAGAACATCTACTCACCATCCATCTGGCGAAGC
                      ____________________________________________________________
consensus             TCATCATCATCATCATAAGCACCAAAGGAGAACATCTACTCACCATCCATCTGGCGAAGC
 
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rJMSF039B09+          TGATTACCGCTATTACCTTCATCACGTTCACAAAGGCAGCCGCCACCGCAGAGCCAAAGG
rJMSF018I05+          TGATTACCGCTATTACCTTCATCACGTTCACAAAGGCAGCCGCCACCGCAGAGCCAAAGG
rJMSF018H05+          TGATTACCGCTATTACCTTCATCACGTTCACAAAGGCAGCCGCCACCGCAGAGCCAAAGG
                      ____________________________________________________________
consensus             TGATTACCGCTATTACCTTCATCACGTTCACAAAGGCAGCCGCCACCGCAGAGCCAAAGG
 
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rJMSF039B09+          TGGTTCATCAGGGATCAAGAAGCAAGTTCACCCAAGACAACACCACAACAAAGGTGCTGT
rJMSF018I05+          TGGTTCATCAGGGATCAAGAAGCAAGTTCACCCAAGACAACACCACAACAAAGGTGCTGT
rJMSF018H05+          TGGTTCATCAGGGATCAAGAAGCAAGTTCACCCAAGACAACACCACAACAAAGGTGCTGT
                      ____________________________________________________________
consensus             TGGTTCATCAGGGATCAAGAAGCAAGTTCACCCAAGACAACACCACAACAAAGGTGCTGT
 
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rJMSF039B09+          TGCTAGCTCATCATACACATTCATCTCTCAGGTATGATGAGAGGAGGAAAAATTTGGATG
rJMSF018I05+          TGCTAGCTCATCATACACATTCATCTCTCAGGTATGATGAGAGGAGGAAAAATTTGGATG
rJMSF018H05+          TGCTAGCTCATCATACACATTCATCTCTCAGGTATGATGAGAGGAGGAAAAATTTGGATG
                      ____________________________________________________________
consensus             TGCTAGCTCATCATACACATTCATCTCTCAGGTATGATGAGAGGAGGAAAAATTTGGATG
 
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rJMSF039B09+          AATTCTTAGGAAAATTTATAGAGAAATTAATATTCATAGTTTATAGTTTATGTACATATG
rJMSF018I05+          AATTCTTAGGAAAATTTATAGAGAAATTAATATTCATAGTTTATAGTTTATGTACATATG
rJMSF018H05+          AATTCTTAGGAAAATTTATAGAGAAATTAATATTCATAGTTTATAGTTTATGTACATATG
                      ____________________________________________________________
consensus             AATTCTTAGGAAAATTTATAGAGAAATTAATATTCATAGTTTATAGTTTATGTACATATG
 
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rJMSF039B09+          ATCTAACGTTTGTGTGATTATTTGGAGT                                
rJMSF018I05+          ATCTAACGTTTGTGTGATTATTTGGAGTTGTTAAGTTTATAAATAATCACATCTAATGT 
rJMSF018H05+          ATCTAACGTTNGTGTGATTATTTGGAGTTGTTAAGTTTATAAATAATCACATCTAATGTT
                      ____________________________________________________________
consensus             ATCTAACGTTTGTGTGATTATTTGGAGTTGTTAAGTTTATAAATAATCACATCTAATGTT