Contig 007085:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018C05Sequence412002350 (3)ref|XP_004244283.2|6e-30PREDICTED: tubby-like F-box protein 7 [Solanum lycopersicum]710007085 (2)ref|XP_009631710.1|3e-111PREDICTED: tubby-like F-box protein 7 [Nicotiana tomentosiformis]
JMSF035I06Sequence671002350 (3)ref|XP_004244283.2|9e-89PREDICTED: tubby-like F-box protein 7 [Solanum lycopersicum]719007085 (2)ref|XP_009631710.1|8e-112PREDICTED: tubby-like F-box protein 7 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF035I06+           TCTCCTTTGCAGGTCAGATTTTCTAGGAACCAATTTTACAATATATGACAGTCAACCAC
rJMSF018C05+                              TTTCTAGGAACCAATTTTACAATATATGACAGTCAACCAC
                      ____________________________________________________________
consensus              TCTCCTTTGCAGGTCAGATTTTCTAGGAACCAATTTTACAATATATGACAGTCAACCAC
 
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rJMSF035I06+          CACACAGTGGTGCAAAGCCATCAAGCAGCAGATCTTGCCGCCGTTTTACAAGCAAGCAGA
rJMSF018C05+          CACACAGTGGTGCAAAGCCATCAAGCGGCAGATCTTGCCGCCGTTTTACAAGCAAGCAGA
                      ____________________________________________________________
consensus             CACACAGTGGTGCAAAGCCATCAAGCGGCAGATCTTGCCGCCGTTTTACAAGCAAGCAGA
 
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rJMSF035I06+          TAAGCCCCCAAGTCCCTGCTGGAAACTTTGAGATNGGATGTGTTTCCTATAAGTTCAACC
rJMSF018C05+          TAAGCCCCCAAGTCCCTGCTGGAAACTTTGAGATTGGATGTGTTTCCTATAAGTTCAACC
                      ____________________________________________________________
consensus             TAAGCCCCCAAGTCCCTGCTGGAAACTTTGAGATTGGATGTGTTTCCTATAAGTTCAACC
 
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rJMSF035I06+          TCTTGAAGTCGAGGGGGCCTAGGAGGATGGTGTGCTCTCTCAAGTGTCTATCCTCTGGAG
rJMSF018C05+          TCTTGAAGTCGAGGGGGCCTAGGAGGATGGTGTGCTCTCTCAAGTGTCTATCCTCTGGAG
                      ____________________________________________________________
consensus             TCTTGAAGTCGAGGGGGCCTAGGAGGATGGTGTGCTCTCTCAAGTGTCTATCCTCTGGAG
 
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rJMSF035I06+          ACACCACAAATACAGACAGATTACACGATGCGATTATGAAAAAGCCTAGCTCTGCCGCTA
rJMSF018C05+          ACACCACAAATACAGACAGATTACACGATGCGATTATGAAAAAGCCTAGCTCTGCCGCTA
                      ____________________________________________________________
consensus             ACACCACAAATACAGACAGATTACACGATGCGATTATGAAAAAGCCTAGCTCTGCCGCTA
 
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rJMSF035I06+          TACCATACACAGTTCTCAGAAATAAAGCCCCAAGGTGGCATGAACACTTACAATGTTGGT
rJMSF018C05+          TACCATACACAGTTCTCAGAAATAAAGCCCCAAGGTGGCATGAACACTTACAATGTTGGT
                      ____________________________________________________________
consensus             TACCATACACAGTTCTCAGAAATAAAGCCCCAAGGTGGCATGAACACTTACAATGTTGGT
 
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rJMSF035I06+          GCTTGAATTTCCACGGTAGGGTGACAGTAGCTTCGGTAAAGAATTTTCAACTAGTCGCTA
rJMSF018C05+          GCTTGAATTTCCACGGTAGGGTGACAGTAGCTTCGGTAAAGAATTTTCAACTAGTCGCTA
                      ____________________________________________________________
consensus             GCTTGAATTTCCACGGTAGGGTGACAGTAGCTTCGGTAAAGAATTTTCAACTAGTCGCTA
 
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rJMSF035I06+          CATTGGATCAGAGCCAACCTGGTGGAAAAGGTGATGAGGAAACTGTGATCCTCCAGTTTG
rJMSF018C05+          CATTGGATCAGAGCCAACCTGGTGGAAAAGGTGATGAGGAAACTGTGATCCTCCAGTTTG
                      ____________________________________________________________
consensus             CATTGGATCAGAGCCAACCTGGTGGAAAAGGTGATGAGGAAACTGTGATCCTCCAGTTTG
 
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rJMSF035I06+          GGAAGGTAGGGGATGATGTTTTTACAATGGACTACAGGAAGCCTTTGTCAGCTTTCCAAG
rJMSF018C05+          GGAAGGTAGGGGATGATGTTTTTACAATGGACTACAGGAAGCCTTTGTCAGCTTTCCAAG
                      ____________________________________________________________
consensus             GGAAGGTAGGGGATGATGTTTTTACAATGGACTACAGGAAGCCTTTGTCAGCTTTCCAAG
 
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rJMSF035I06+          CATTTGCAATTTGCCTCACAAGTTTTGGCACAAAGTTGGCCTGTGAGTAG          
rJMSF018C05+          CATTTGCAATTTGCCTCACAAGTTTTGGCACAAAGTTGGCCTGTGAGTAGATAAATATAT
                      ____________________________________________________________
consensus             CATTTGCAATTTGCCTCACAAGTTTTGGCACAAAGTTGGCCTGTGAGTAGATAAATATAT
 
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rJMSF018C05+          GCCCCCCTTGCTTTGGGGCCTGTGTTCTTTATCTTCCAAGTAGTATAGTAACATATATAG
                      ____________________________________________________________
consensus             GCCCCCCTTGCTTTGGGGCCTGTGTTCTTTATCTTCCAAGTAGTATAGTAACATATATAG
 
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rJMSF018C05+          AAATATCTGTTCTAGTTTTGCTGGTGGACTCGGATGCTTCAACCATGTAACTTGCAATTG
                      ____________________________________________________________
consensus             AAATATCTGTTCTAGTTTTGCTGGTGGACTCGGATGCTTCAACCATGTAACTTGCAATTG