Contig 007083:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025A15Sequence758007083 (3)ref|XP_006349569.1|3e-47PREDICTED: WEB family protein At2g38370-like [Solanum tuberosum]
JMSF017O06Sequence460013321 (3)emb|CDP06404.1|1e-32unnamed protein product [Coffea canephora]760007083 (3)ref|XP_006349569.1|1e-32PREDICTED: WEB family protein At2g38370-like [Solanum tuberosum]
JMSF021J01Sequence620013321 (3)ref|XP_011095110.1|7e-36PREDICTED: WEB family protein At2g38370 [Sesamum indicum]732007083 (3)ref|XP_006349569.1|4e-64PREDICTED: WEB family protein At2g38370-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+                                          GAGGAAGCCACAGAAGAAGTTAAAACCA
rJMFF025A15+                                                    CAGAAGAAGTTAAANCCA
                      ____________________________________________________________
consensus                                             GAGGAAGCCACAGAAGAAGTTAAAACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          GCANGAAGGCGTTAGAAGAAGCACTGAGTAGAGTGGAGGCAGCAAATAGGAGTAAGCTGG
rJMFF025A15+          GCAAGAAGGCGTTAGAAGAAGCACTGAGTAGAGTGGAGGCAGCAAATAGGAGTAAGCTGG
                      ____________________________________________________________
consensus             GCAAGAAGGCGTTAGAAGAAGCACTGAGTAGAGTGGAGGCAGCAAATAGGAGTAAGCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          AAGTGGAAGAAGCCCTGCGCAAGTGGAGGTCTGAACGTGGTGGTCAAAGAAGACGTTCTA
rJMFF025A15+          AAGTGGAAGAAGCCCTGCGCAAGTGGAGGTCTGAACGTGGTGGTCAAAGAAGACGTTCTA
                      ____________________________________________________________
consensus             AAGTGGAAGAAGCCCTGCGCAAGTGGAGGTCTGAACGTGGTGGTCAAAGAAGACGTTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          TACAAAACTCAACCAAGTTCAAGAACG-CTTACTCAACTCAACACCGTAAAGATTCTCAG
rJMFF025A15+          TACAAAACTCAACCAAGTTCAAGAACGNCTTACTCAACTCAACACCGTAAAGATTCTCAG
rJMSF017O06+                                      CTTACTCNACTCAACACCGTAAAGATTCTCAG
                      ____________________________________________________________
consensus             TACAAAACTCAACCAAGTTCAAGAACGNCTTACTCAACTCAACACCGTAAAGATTCTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          CTCCTTGATGTGAATGGTCTCACTCTCATTACTGACGAGGCAAAACCAGTTTTGAAATCA
rJMFF025A15+          CTCCTTGATGTGAATGGTCTCACTCTCATTACTGACGAGGCAAAACCAGTTTTGAAATCA
rJMSF017O06+          CTCCTTGATGTGAATGGTCTCACTCTCATTACTGACGAGGCAAAACCAGTTTTGAAATCA
                      ____________________________________________________________
consensus             CTCCTTGATGTGAATGGTCTCACTCTCATTACTGACGAGGCAAAACCAGTTTTGAAATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          TCCCTTTCGATAGGTCAAATACTGAGCAGGAAGCTGCAACTAGCCGAAGAATTTGAAAAT
rJMFF025A15+          TCCCTTTCGATAGGTCAAATACTGAGCAGGAAGCTGCAACTAGCCGAAGAATTTGAAAAT
rJMSF017O06+          TCCCTTTCGATAGGTCAAATACTGAGCAGGAAGCTGCAACTAGCCGAAGAATTTGAAAAT
                      ____________________________________________________________
consensus             TCCCTTTCGATAGGTCAAATACTGAGCAGGAAGCTGCAACTAGCCGAAGAATTTGAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          GGGATTCTGGCAGAAAAGAGCAGTGGAAAGCGGAAAGTGTCACTGGCTCAAATGCTCGGT
rJMFF025A15+          GGGATTCTGGCAGAAAAGAGCAGTGGAAAGCGGAAAGTGTCACTGGCTCAAATGCTCGGT
rJMSF017O06+          GGGATTCTGGCAGAAAAGAGCAGTGGAAAGCGGAAAGTGTCACTGGCTCAAATGCTCGGT
                      ____________________________________________________________
consensus             GGGATTCTGGCAGAAAAGAGCAGTGGAAAGCGGAAAGTGTCACTGGCTCAAATGCTCGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          AAGACAAACAGCAGCAGCGTCACCAATTCAAAAGACGACAAGGAGAATGCTCATAAGCAG
rJMFF025A15+          AAGACAAACAGCAGCAGCGTCACCAATTCAAAAGACGACAAGGAGAATGCTCATAAGCAG
rJMSF017O06+          AAGACAAACAGCAGCAGCGTCACCAATTCAAAAGACGACAAGGAGAATGCTCATAAGCAG
                      ____________________________________________________________
consensus             AAGACAAACAGCAGCAGCGTCACCAATTCAAAAGACGACAAGGAGAATGCTCATAAGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          CAGCAACCCCCAGCAAAGAGAAAGAAGTTCGGTTTCTCACGCATCTCTCTTCTCGTGACA
rJMFF025A15+          CAGCAACCCCCAGCAAAGAGAAAGAAGTTCGGTTTCTCACGCATCTCTCTTCTCGTGACA
rJMSF017O06+          CAGCAACCCCCAGCAAAGAGAAAGAAGTTCGGTTTCTCACGCATCTCTCTTCTCGTGACA
                      ____________________________________________________________
consensus             CAGCAACCCCCAGCAAAGAGAAAGAAGTTCGGTTTCTCACGCATCTCTCTTCTCGTGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          AAACAAAGCAAGAAGAAGAAGCAAACCCCAAGTTATAGATGCCGCAGTGTGTAAAAGAGA
rJMFF025A15+          AAACAAAGCAAGAAGAAGAAGCAAACCCCAAGTTATAGATGCCGCAGTGTGTAAAAGAGA
rJMSF017O06+          AAACAAAGCAAGAAGAAGAAGCAAACCCCAAGTTATAGATGCCGCAGTGTGTAAAAGAGA
                      ____________________________________________________________
consensus             AAACAAAGCAAGAAGAAGAAGCAAACCCCAAGTTATAGATGCCGCAGTGTGTAAAAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          ACAGGTGATTGAACCATCTGTGGTGGAAAATGGATTTCCTTTCTAATGCATGATGCCCAG
rJMFF025A15+          ACAGGTGATTGAACCATCTGTGGTGGAAAATGGATTTCCTTTNTAATGCATGATGCCCAG
rJMSF017O06+          ACAGGTGATTGAACCATCTGTGGTGGAAAATGGATTTCCTTTCTAATGCATGATGCCCAG
                      ____________________________________________________________
consensus             ACAGGTGATTGAACCATCTGTGGTGGAAAATGGATTTCCTTTCTAATGCATGATGCCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          TGTCTGTAATTATCCTGAGACTCTAGTTACTTACTATGGTTGTTTAATCTAGGATTGTAT
rJMFF025A15+          TGTCTGTAATTATCCTGAGACTCTAGTTACTTACTATGGTTGTTTAATCTAGGATTGTAT
rJMSF017O06+          TGTCTGTAATTATCCTGAGACTCTAGTTACTTACTATGGTTGTTTAATCTAGGATTGTAT
                      ____________________________________________________________
consensus             TGTCTGTAATTATCCTGAGACTCTAGTTACTTACTATGGTTGTTTAATCTAGGATTGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF021J01+          TGTTGGATTGCTAATTCCATTATTTATGTAATTATGTTGAAATTA               
rJMFF025A15+          TGTTGGATTGCTAATTCCATTATTTATGTAATTATGTTGAAATTAGTTTACTTACTATGT
rJMSF017O06+          TGTTGGATTGCTAATTCCATTATTTATGTAATTATGTTGAAATTAGTTTACTTACTATGT
                      ____________________________________________________________
consensus             TGTTGGATTGCTAATTCCATTATTTATGTAATTATGTTGAAATTAGTTTACTTACTATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025A15+          TGTTTAATCTAGGATTGGGA                                        
rJMSF017O06+          TGTTTAATCTAGGATTGGGATTCTTCCATTTATGTAATCTGTGTTTGTTAGCTGTATGTA
                      ____________________________________________________________
consensus             TGTTTAATCTAGGATTGGGATTCTTCCATTTATGTAATCTGTGTTTGTTAGCTGTATGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017O06+          TCATATCCCCAGTCCAGACAATGAATCTTTGGATTTTTATTGGATTGCTAATTCTACAAG
                      ____________________________________________________________
consensus             TCATATCCCCAGTCCAGACAATGAATCTTTGGATTTTTATTGGATTGCTAATTCTACAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017O06+          TTATCTCATCCCACTTGATTCTCCAATCCCATAAGATATAATGAATGTACAAAGTCATGT
                      ____________________________________________________________
consensus             TTATCTCATCCCACTTGATTCTCCAATCCCATAAGATATAATGAATGTACAAAGTCATGT