| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF016E01 | Sequence | 304 | 006709 (6) | gb|EYU19767.1| | 1e-13 | hypothetical protein MIMGU_mgv1a008792mg [Erythranthe guttata] | 737 | 007077 (3) | emb|CDO99843.1| | 4e-46 | unnamed protein product [Coffea canephora] |
| JMSF049M14 | Sequence | 689 | 006709 (6) | ref|XP_010312581.1| | 2e-116 | PREDICTED: mRNA cap guanine-N7 methyltransferase 2 isoform X3 [Solanum lycopers | 761 | 007077 (3) | emb|CDO99843.1| | 2e-56 | unnamed protein product [Coffea canephora] |
| JMSF052I11 | Sequence | 677 | 006709 (6) | ref|XP_006360495.1| | 5e-104 | PREDICTED: mRNA cap guanine-N7 methyltransferase 2-like isoform X2 [Solanum tub | 939 | 007077 (3) | emb|CDO99843.1| | 6e-78 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF052I11+ GGNCAGTGGAATGAANCCCAACCTTGTCCCCCAATTGCATTAGATC
____________________________________________________________
consensus GGNCAGTGGAATGAANCCCAACCTTGTCCCCCAATTGCATTAGATC
. : . : . : . : . : . :
rJMSF052I11+ TGAGAGTTACACAATAGCTTTTGAAGTTGAGGAAGAGAAGTTTCCTTTTTTGGAAAGAAG
____________________________________________________________
consensus TGAGAGTTACACAATAGCTTTTGAAGTTGAGGAAGAGAAGTTTCCTTTTTTGGAAAGAAG
. : . : . : . : . : . :
rJMSF052I11+ TACCAGATGAAGTTTGCGAATGATATATCTGCAGAAACTCAGTGTCTGGTTCATTTCCCA
____________________________________________________________
consensus TACCAGATGAAGTTTGCGAATGATATATCTGCAGAAACTCAGTGTCTGGTTCATTTCCCA
. : . : . : . : . : . :
rJMSF049M14+ TGATCAGGTTGGCTAGAGAGGCTGNCCTTGATTACATTGAGATTCAAAACTTGACA
rJMSF052I11+ AGCTTGATCAGGTTGGCTAGAGAGGCTGGCCTTGATTACATTGAGATTCAAAACTTGACA
rJMSF016E01+ TGACA
____________________________________________________________
consensus AGCTTGATCAGGTTGGCTAGAGAGGCTGGCCTTGATTACATTGAGATTCAAAACTTGACA
. : . : . : . : . : . :
rJMSF049M14+ GATTTCTATGATGATTATAGGCCACAATTTGTAGGAATGCTACAAGATGTGAACCATAAT
rJMSF052I11+ GATTTCTATGATGATTATAGGCCACAATTTGTAGGAATGCTACAAGATGTGAACCATAAT
rJMSF016E01+ GATTTCTATGATGATTATAGGCCACAATTTGTAGGAATGCTACAAGATGTGAACCATAAT
____________________________________________________________
consensus GATTTCTATGATGATTATAGGCCACAATTTGTAGGAATGCTACAAGATGTGAACCATAAT
. : . : . : . : . : . :
rJMSF049M14+ CTCATTGATCCTAGGGGCAGACTTCTTCCCAGAGCCTATGATGTTTTAGGTCTGTTCACT
rJMSF052I11+ CTCATTGATCCTAGGGGCAGACTTCTTCCCAGAGCCTATGATGTTTTAGGTCTGTTCACT
rJMSF016E01+ CTCATTGATCCTAGGGGCAGACTTCTTCCCAGAGCCTATGATGTTTTAGGTCTGTTCACT
____________________________________________________________
consensus CTCATTGATCCTAGGGGCAGACTTCTTCCCAGAGCCTATGATGTTTTAGGTCTGTTCACT
. : . : . : . : . : . :
rJMSF049M14+ ACCTTTGTATTTCAAAAGCCTGATCCCGACATTACTCCACCTCTGATGACTCCATTCATA
rJMSF052I11+ ACCTTTGTATTTCAAAAGCCTGATCCCGACATTACTCCACCTCTGATGACTCCATTCATA
rJMSF016E01+ ACCTTTGTATTTCAAAAGCCTGATCCCGACATTACTCCACCTCTGATGACTCCATTCATA
____________________________________________________________
consensus ACCTTTGTATTTCAAAAGCCTGATCCCGACATTACTCCACCTCTGATGACTCCATTCATA
. : . : . : . : . : . :
rJMSF049M14+ GTAAGAAGAAACAATGATGATGAGGCAAGTGAATACCACAGTACAAAGCACATCTTGCAA
rJMSF052I11+ GTAAGAAGAAACAATGATGATGAGGCAAGTGAATACCACAGTACAAAGCACATCTTGCAA
rJMSF016E01+ GTAAGAAGAAACAATGATGATGAGGCAAGTGAATACCACAGTACAAAGCACATCTTGCAA
____________________________________________________________
consensus GTAAGAAGAAACAATGATGATGAGGCAAGTGAATACCACAGTACAAAGCACATCTTGCAA
. : . : . : . : . : . :
rJMSF049M14+ ATGATACCGATGGATCCACAAGGAATTGTGTGGAGAGATGATGAGAAGAATGGACAGGTT
rJMSF052I11+ ATGATACCGATGGATCCACAAGGAATTGTGTGGAGAGATGATGAGAAGAATGGACAGGTT
rJMSF016E01+ ATGATACCGATGGATCCACAAGGAATTGTGTGGAGAGATGATGAGAAGAATGGACAGGTT
____________________________________________________________
consensus ATGATACCGATGGATCCACAAGGAATTGTGTGGAGAGATGATGAGAAGAATGGACAGGTT
. : . : . : . : . : . :
rJMSF049M14+ GAGTCATCCCAGGGATTGGGCAAGATAACAGAACAAAAGGGGATATTAGGTCCCGGCCCA
rJMSF052I11+ GAGTCATCCCAGGGATTGGGCAAGATAACAGAACAAAAGGGGATATTAGGTCCCGGCCCA
rJMSF016E01+ GAGTCATCCCAGGGATTGGGCAAGATAACAGAACAAAAGGGGATATTAGGTCCCGGCCCA
____________________________________________________________
consensus GAGTCATCCCAGGGATTGGGCAAGATAACAGAACAAAAGGGGATATTAGGTCCCGGCCCA
. : . : . : . : . : . :
rJMSF049M14+ GCAGAATTGCGCTTCCCTGA-GGCACTTTGACCCATCATTGATTAATGGCTGAAGTGGAT
rJMSF052I11+ GCAGAATTGCGCTTCCCTGAGGGCACTTTGACCCATCATTGATTAATGGCTGAAGTGGAT
rJMSF016E01+ GCAGAATTGCGCTTCCCTGA-GGCACTTTGACCCATCATTGATTAATGGCTGAAGTGGAT
____________________________________________________________
consensus GCAGAATTGCGCTTCCCTGA-GGCACTTTGACCCATCATTGATTAATGGCTGAAGTGGAT
. : . : . : . : . : . :
rJMSF049M14+ TAGATAGAGAAGTGAGAAGCTGCAAGTTTACTCTAAGTTCAGTAATTTCATTTTGGAGAG
rJMSF052I11+ TAGATAGAGAAGTGAGAAGCTGCAAGTTTACTCTAAGTTCAGTAATTTCATTTTGGAGAG
rJMSF016E01+ TAGATAGAGAAGTGAGAAGCTGCAAGTTTACTCTAAGTTCAGTAATTTCATTTTGGAGAG
____________________________________________________________
consensus TAGATAGAGAAGTGAGAAGCTGCAAGTTTACTCTAAGTTCAGTAATTTCATTTTGGAGAG
. : . : . : . : . : . :
rJMSF049M14+ GGAAGGGAGAAGGTGGAAGAAGTTTTGTATGTTGTTATAAGGCTAGTAGTTTTACTCTGT
rJMSF052I11+ GGAAGGGAGAAGGTGGAAGAAGTTTTGTATGTTGTTATAAGGCTAGTAGTTTTACTCTGT
rJMSF016E01+ GGAAGGGAGAAGGTGGAAGAAGTTTTGTATGTTGTTATAAGGCTAGTAGTTTTACTCTGT
____________________________________________________________
consensus GGAAGGGAGAAGGTGGAAGAAGTTTTGTATGTTGTTATAAGGCTAGTAGTTTTACTCTGT
. : . : . : . : . : . :
rJMSF049M14+ TGAAGAGCTTTAAAATTTGCCAAGACATCCAGTATGGAGGCATTGTACAGTCTGTACTAT
rJMSF052I11+ TGAAGAGCTTTAAAATTTGCCAAGACATCCAGTATGGAGGCATTGTACAGTCTGTACTAT
rJMSF016E01+ TGAAGAGCTTTAAAATTTGCCAAGACATCCAGTATGGAGGCATTGTACAGTCTGTACTAT
____________________________________________________________
consensus TGAAGAGCTTTAAAATTTGCCAAGACATCCAGTATGGAGGCATTGTACAGTCTGTACTAT
. : . : . : . : . : . :
rJMSF049M14+ TTCAGTAGCACAAGCCAAGGTATTGTGTCACTAATAGGTGTAAAATCACTGTTATTTGGG
rJMSF052I11+ TTCAGTAGCACAAGCCAAGGTATTGTGTCACTAATAGGTGTAAAATCACTGTTATTTGGG
rJMSF016E01+ TTCAGTAGCACAAGCCAAGGTATTGTGTCACTAATAGGTGTAAAATCACTGTTATTTGGG
____________________________________________________________
consensus TTCAGTAGCACAAGCCAAGGTATTGTGTCACTAATAGGTGTAAAATCACTGTTATTTGGG
. : . : . : . : . : . :
rJMSF049M14+ GTACCTTTTATGTCACTGTCTGTATGTATTAACAACGCTAAATT
rJMSF052I11+ GTACCTTTTATGTCACTGTCTGTATGTATTAACAACGCTAAATTGTCATTAGT
rJMSF016E01+ GTACCTTTTATGTCACTGTCTGTATGTATTAACAACGCTAAATTGTCATTAGTTTTCTAT
____________________________________________________________
consensus GTACCTTTTATGTCACTGTCTGTATGTATTAACAACGCTAAATTGTCATTAGTTTTCTAT