Contig 007070:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021O07Sequence538005015 (4)emb|CDO97109.1|4e-75unnamed protein product [Coffea canephora]658007070 (3)emb|CDO97108.1|2e-70unnamed protein product [Coffea canephora]
JMSF014E11Sequence510005015 (4)gb|KCW63866.1|4e-66hypothetical protein EUGRSUZ_G01535, partial [Eucalyptus grandis]781007070 (3)emb|CDO97108.1|2e-84unnamed protein product [Coffea canephora]
JMSF016P06Sequence471005015 (4)gb|KCW63866.1|9e-67hypothetical protein EUGRSUZ_G01535, partial [Eucalyptus grandis]740007070 (3)emb|CDO97108.1|3e-84unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF014E11+                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMSF016P06+                    AGAAGGTCGGCCTCAAAAGAGACGAAGCCTGTCACAACTTCATCTTCTTC
rJMSF014E11+          GACGACGCCGAGAAGGTCGGCCTCAAAAGAGACGAAGCCTGTCACNACTTCATCTTCTTC
                      ____________________________________________________________
consensus             GACGACGCCGAGAAGGTCGGCCTCAAAAGAGACGAAGCCTGTCACAACTTCATCTTCTTC
 
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rJMSF016P06+          GTCTGCTTCAACTCCTACGCCGCCTTCAAGTTCTTCCTCCCGGAGCTCATGAAGTACATC
rJMFF021O07+                                                    GAGCTCATGAAGTACATC
rJMSF014E11+          GTCTGCTTCAACTCCTACGCCGCCTTCAAGTTCTTCCTCCCGGAGCTCATGAAGTACATC
                      ____________________________________________________________
consensus             GTCTGCTTCAACTCCTACGCCGCCTTCAAGTTCTTCCTCCCGGAGCTCATGAAGTACATC
 
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rJMSF016P06+          GGCTCCGCCGGGGAGGCCCTCCACCGGCAGCTGGCGGAGGAGATCCGCGGCGCGGTGGAG
rJMFF021O07+          GGCTCCGCCGGGGAGGCCCTCCACCGGCAGCTGGCGGAGGAGATCCGCGGCGCGGTGGAG
rJMSF014E11+          GGCTCCGCCGGGGAGGCCCTCCACCGGCAGCTGGCGGAGGAGATCCGCGGCGCGGTGGAG
                      ____________________________________________________________
consensus             GGCTCCGCCGGGGAGGCCCTCCACCGGCAGCTGGCGGAGGAGATCCGCGGCGCGGTGGAG
 
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rJMSF016P06+          CTAGAAGGCGGGAAAATCACCATCAACGCCCTCAACAACATGCCGTTGACCGAATCCGCA
rJMFF021O07+          NTAGAAGGCGGGAAAATCACCATCAACGCCCTCAACAACATGCCGTTGACCGAATCCGCA
rJMSF014E11+          CTAGAAGGCGGGAAAATCACCATCAACGCCCTCAACAACATGCCGTTGACCGAATCCGCA
                      ____________________________________________________________
consensus             CTAGAAGGCGGGAAAATCACCATCAACGCCCTCAACAACATGCCGTTGACCGAATCCGCA
 
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rJMSF016P06+          ATCTGGGAAGCTCTCAGGATCGAACCCCCAATCCGGTACCAATACGCAGTAGCCAAGGAG
rJMFF021O07+          ATCTGGGAAGCTCTCAGGATCGAACCCCCAATCCGGTACCAATACGCAGTAGCCAAGGAG
rJMSF014E11+          ATCTGGGAAGCTCTCAGGATCGAACCCCCAATCCGGTACCAATACGCAGTAGCCAAGGAG
                      ____________________________________________________________
consensus             ATCTGGGAAGCTCTCAGGATCGAACCCCCAATCCGGTACCAATACGCAGTAGCCAAGGAG
 
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rJMSF016P06+          GACATAACCATCAAAACCTACGACGCTTCCTACCTCGTCAAGAAAGGAGAAACCATATTC
rJMFF021O07+          GACATAACCATCAAAACCTACGACGCTTCCTACCTCGTCAAGAAAGGAGAAACCATATTC
rJMSF014E11+          GACATAACCATCAAAACCTACGACGCTTCCTACCTCGTCAAGAAAGGAGAAACCATATTC
                      ____________________________________________________________
consensus             GACATAACCATCAAAACCTACGACGCTTCCTACCTCGTCAAGAAAGGAGAAACCATATTC
 
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rJMSF016P06+          GGGTTCCAACCCTTCGCCACCAAAGACCCCAAGGTTTTCGAAAACCCGGAACAGTATATC
rJMFF021O07+          GGGTTCCAACCCTTCGCCACCAAAGACCCCAAGGTTTTCGAAAACCCGGAACAGTATATC
rJMSF014E11+          GGGTTCCAACCCTTCGCCACCAAAGACCCCAAGGTTTTCGAAAACCCGGAACAGTATATC
                      ____________________________________________________________
consensus             GGGTTCCAACCCTTCGCCACCAAAGACCCCAAGGTTTTCGAAAACCCGGAACAGTATATC
 
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rJMSF016P06+          CCGGATAGATTCGTCGGAGAGGGGAAGAAGCTGATCGAGTACGTTTACTGGTCCAACGGG
rJMFF021O07+          CCGGATAGATTCGTCGGAGAGGGGAAGAAGCTGATCGAGTACGTTTACTGGTCCAACGGG
rJMSF014E11+          CCGGATAGATTCGTCGGAGAGGGGAAGAAGCTGATCGAGTACGTTTACTGGTCCAACGGG
                      ____________________________________________________________
consensus             CCGGATAGATTCGTCGGAGAGGGGAAGAAGCTGATCGAGTACGTTTACTGGTCCAACGGG
 
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rJMSF016P06+          AGAGGGACTGATATCCCGACGGCGAACGACAAACAGTGCCTGGGAAGGAACATGATTATT
rJMFF021O07+          AGAGGGACTGATATCCCGACGGCGAACGACAAACAGTGCCTGGGAAGGAACATGATTATT
rJMSF014E11+          AGAGGGACTGATATCCCGACGGCGAACGACAAACAGTGCCTGGGAAGGAACATGATTATT
                      ____________________________________________________________
consensus             AGAGGGACTGATATCCCGACGGCGAACGACAAACAGTGCCTGGGAAGGAACATGATTATT
 
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rJMSF016P06+          CTGCTTTCAAAGCTGCACTTGGCGGAGTTTTTTCTCCGTTACGATACATTCACCGTTGAG
rJMFF021O07+          CTGCTTTCAAAGCTGCACTTGGCGGAGTTTTTTCTCCGTTACGATACATTCACCGTTGAG
rJMSF014E11+          CTGCTTTCAAAGCTGCACTTGGCGGAGTTTTTTCTCCGTTACGATACATTCACCGTTGAG
                      ____________________________________________________________
consensus             CTGCTTTCAAAGCTGCACTTGGCGGAGTTTTTTCTCCGTTACGATACATTCACCGTTGAG
 
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rJMSF016P06+          GTTTCAAAGTACCTTTTCAGCTCCATCGTTAAAGTCAAGTCCCTAACCAAAG        
rJMFF021O07+          GTTTCAAAGTACCTTTTCAGCTCCATCGTTAAAGTCAAGTCCCTAACCAAAG        
rJMSF014E11+          GTTTCAAAGTACCTTTTCAGCTCCATCGTTAAAGTCAAGTCCCTAACCAAAGCTTCTTCA
                      ____________________________________________________________
consensus             GTTTCAAAGTACCTTTTCAGCTCCATCGTTAAAGTCAAGTCCCTAACCAAAGCTTCTTCA
 
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rJMSF014E11+          TCAACATGAAAGCATTAGTCAACTTTTTGGGGATCCGGAATGTTTGATTTGTTTCAACTT
                      ____________________________________________________________
consensus             TCAACATGAAAGCATTAGTCAACTTTTTGGGGATCCGGAATGTTTGATTTGTTTCAACTT
 
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rJMSF014E11+          GTATAATTTTCTTTATTTTATATTTCTGTTTTTTTCATAATTCAAATGGATAATAACGTG
                      ____________________________________________________________
consensus             GTATAATTTTCTTTATTTTATATTTCTGTTTTTTTCATAATTCAAATGGATAATAACGTG