Contig 007066:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF013A22+                                                                  GGAA
                      ____________________________________________________________
consensus                                                                     GGAA
 
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rJMSF001I10+                                                                TTCAAC
rJMSF013A22+          AGCATATCTCACGTTCTTGCNGGCTGCAAAATCGCTAAGGAGGCGTGGACTTACTTCAAC
                      ____________________________________________________________
consensus             AGCATATCTCACGTTCTTGCNGGCTGCAAAATCGCTAAGGAGGCGTGGACTTACTTCAAC
 
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rJMSF001I10+          AGTCAGCTGAACACTACGGAAGACCACAACGCCTCGACCTGGTTCATGAAGATTATCCGA
rJMSF013A22+          AGTCAGCTGAACACTACGGAAGACCACAACGCCTCGACCTGGTTCATTAAGATTATCCGA
                      ____________________________________________________________
consensus             AGTCAGCTGAACACTACGGAAGACCACAACGCCTCGACCTGGTTCATTAAGATTATCCGA
 
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rJMSF001I10+          CAACTCCGCAAAGATCAAATATGCAGCTTTGTCATGATTTGTTGGAACTTGTGGTTAGCA
rJMSF013A22+          CAACTCCGCAAAGATCAAATATGCAGCTTTGTCATGATTTGTTGGAACTTGTGGTTAGCA
                      ____________________________________________________________
consensus             CAACTCCGCAAAGATCAAATATGCAGCTTTGTCATGATTTGTTGGAACTTGTGGTTAGCA
 
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rJMSF001I10+          CGTAATGAAAAAATATGGAATCAGGTCTCAACCACAGGCAGGAATATTGTGGAGAAAACC
rJMSF013A22+          CGTAATGAAAAAATATGGAATCAGGTCTCAACCACAGGCAGGAATATTGTGGAGAAAACC
                      ____________________________________________________________
consensus             CGTAATGAAAAAATATGGAATCAGGTCTCAACCACAGGCAGGAATATTGTGGAGAAAACC
 
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rJMSF001I10+          AGAGCTTTCCTTCTTGATTGGAATCGGGTGCATGCTAAACATTCCAACCGACCTGCTTAC
rJMSF013A22+          AGAGCTTTCCTTCTTGATTGGAATCGGGTGCATGCTAAACATTCCAACCGACCTGCTTAC
                      ____________________________________________________________
consensus             AGAGCTTTCCTTCTTGATTGGAATCGGGTGCATGCTAAACATTCCAACCGACCTGCTTAC
 
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rJMSF001I10+          ATCTCAGGTACTACTCACTGGTCCAGACCCCCCGCTGGTTTTCTTAAGCTAAACATTGAT
rJMSF013A22+          ATCTCAGATACTACTCACTGGTCCAGACCCCCCGCTGGTTTTCTTAAGCTAAACATTGAT
                      ____________________________________________________________
consensus             ATCTCAGGTACTACTCACTGGTCCAGACCCCCCGCTGGTTTTCTTAAGCTAAACATTGAT
 
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rJMSF001I10+          GCTGCTCTTAATCCAAGCATGGGAAGATTGGGCTTTGGCTGGATTCTTCGCGATCATCAT
rJMSF013A22+          GCTGCTCTTAATCCAAGCATGGGAAGATTGGGCTTTGGCTGGATTCTTCGCGATCATCAT
                      ____________________________________________________________
consensus             GCTGCTCTTAATCCAAGCATGGGAAGATTGGGCTTTGGCTGGATTCTTCGCGATCATCAT
 
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rJMSF001I10+          GGGTCCTTCATCGCTGCCTCTAACTTCTCCAAAATCGGCTACTGCTCCCCTAAAGAAGCC
rJMSF013A22+          GGGTCCTTCATCGCTGCCTCTAACTTCTCCAAAATCGGCTACTGCTCCCCTAAAGAAGCC
                      ____________________________________________________________
consensus             GGGTCCTTCATCGCTGCCTCTAACTTCTCCAAAATCGGCTACTGCTCCCCTAAAGAAGCC
 
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rJMSF001I10+          GAGGCCATCGCAGTTCGTGAAGCCCTCTCATGGCTAAAGCAGCAAAACTTCTCCAAAGTC
rJMSF013A22+          GAGGCCATCGCAGTTCGTGAAGCCCTCTCATGGCTAAAGCAGCAAAACTTCTCCAAAGTC
                      ____________________________________________________________
consensus             GAGGCCATCGCAGTTCGTGAAGCCCTCTCATGGCTAAAGCAGCAAAACTTCTCCAAAGTC
 
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rJMSF001I10+          CTTGTTGAAACTGATGCTCTTTCTGTGGTTCAAGGTCTACATGCTGATAATCATACTTCC
rJMSF013A22+          CTTGTTGAAACTGATGCTCTTTCTGTGGTTCAAGGTCTACATGCTGATAATCATACTTCC
                      ____________________________________________________________
consensus             CTTGTTGAAACTGATGCTCTTTCTGTGGTTCAAGGTCTACATGCTGATAATCATACTTCC
 
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rJMSF001I10+          TCTTTTGATCTTGTTTTACTTGACATTAAAGATTTACTAAGTCTTTTAGACGATGTTACA
rJMSF013A22+          TCTTTTGATCTTGTTTTACTTGACATTAAAGATTTACTAAGTCTTTTAGACGATGTTACA
                      ____________________________________________________________
consensus             TCTTTTGATCTTGTTTTACTTGACATTAAAGATTTACTAAGTCTTTTAGACGATGTTACA
 
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rJMSF001I10+          ATCTCGTTTGTTAAACGCTCTGCGAATGGAGTTGCTCATACGCTAGCTAGAGACTCCATC
rJMSF013A22+          ATCTCGTTTGTTAAACGCTCTGCGAATGGAGTTGCTCATACGCTAGCTAGAGACTCCATC
                      ____________________________________________________________
consensus             ATCTCGTTTGTTAAACGCTCTGCGAATGGAGTTGCTCATACGCTAGCTAGAGACTCCATC
 
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rJMSF001I10+          TCTAATGCAGACCGTAGGGACTGGTTCTCAGAACCGCCTTCTTTTATTTGTA        
rJMSF013A22+          TCTAATGCAGACCGTAGGGACTGGTTCTCAGAACCGCCTTCTTTTATTTGTAACTCTGCT
                      ____________________________________________________________
consensus             TCTAATGCAGACCGTAGGGACTGGTTCTCAGAACCGCCTTCTTTTATTTGTAACTCTGCT