Contig 007061:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011A20Sequence525002093 (19)672007061 (14)
JMFF017K16Sequence533002093 (19)754007061 (14)
JMFF037H18Sequence559002093 (19)766007061 (14)
JMFN028J17Sequence507007061 (14)
JMSF007D11Sequence259002093 (19)773007061 (14)
JMSF009B07Sequence238002093 (19)779007061 (14)
JMSF012F19Sequence235002093 (19)771007061 (14)
JMSF014K09Sequence191002093 (19)732007061 (14)
JMSF014L09Sequence535002093 (19)835007061 (14)
JMSF015I11Sequence487002093 (19)756007061 (14)
JMSF016K07Sequence513002093 (19)533007061 (14)
JMSF021M09Sequence677002093 (19)emb|CDP03647.1|3e-05unnamed protein product [Coffea canephora]736007061 (14)
JMSF024G14Sequence659002093 (19)emb|CDP03647.1|4e-07unnamed protein product [Coffea canephora]250007061 (14)
JMSF049P11Sequence683002093 (19)emb|CDP03647.1|1e-04unnamed protein product [Coffea canephora]709007061 (14)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007D11+ TAGATTTTA
rJMSF009B07+ TCTTCAGTTAGATTTTA
rJMSF014L09+ TAGATTTTA
                      ____________________________________________________________
consensus TCTTCAGTTAGATTTTA
 
. : . : . : . : . : . :
rJMSF007D11+ TTCTCACATATATNGTACATATACCCAAAATCCCTGACTTTGAATAGGTTTCACCTTGTT
rJMFF017K16+ ACATATATTGTACATATACCCAAAATCCCTGACTTTGAATAGGTTTCACCTTGTT
rJMSF009B07+ TTCTCACATATATTGTACATATACCCAAAATCCCTGACTTTGAATAGGTTTCACCTTGTT
rJMFF037H18+ TTGTACATATACCCAAAATCCCTGACTTTGAATAGGTTTCACCTTGTT
rJMSF021M09+ ATAGGTTTCACCTTGTT
rJMSF014L09+ NTCTCACATATATTGTACATATACCCAAAATCCCTGACTTTGAATAGGTTTCACCTTGTT
                      ____________________________________________________________
consensus TTCTCACATATATTGTACATATACCCAAAATCCCTGACTTTGAATAGGTTTCACCTTGTT
 
. : . : . : . : . : . :
rJMSF007D11+ TAGGAATTTCCGTCATTGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMFF017K16+ TAGGAATTTCCGTCATTGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMSF009B07+ TAGGAATTTCCGTCATTGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMFF037H18+ TAGGAATTTCCGTCATNGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMSF014K09+ CCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMFF011A20+ TGTTCCTGGACTTACCTCAACTT
rJMSF015I11+ AATTTCCGTCATNGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMSF021M09+ TAGGAATTTCCGTCATNGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMSF014L09+ TAGGAATTTCCGTCATNGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
rJMSF049P11+ TCCGTCATNGTAACCATAACCTAGCCC-TTGTTCCTGGACTTACCTCAACTT
rJMSF012F19+ TTCCGTCATTGTAACCATAACCTAGCCC-TTGNTCCTGGACTTACCTCAACTT
                      ____________________________________________________________
consensus TAGGAATTTCCGTCATTGTAACCATAACCTAGCCCTTTGTTCCTGGACTTACCTCAACTT
 
. : . : . : . : . : . :
rJMSF007D11+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMFF017K16+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF009B07+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMFF037H18+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF014K09+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF024G14+ AACTGAATAGG
rJMFF011A20+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF015I11+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF021M09+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF014L09+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF049P11+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
rJMSF012F19+ CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
                      ____________________________________________________________
consensus CCCCCGGTTTAATGATGAATTGCCTGTCTGTAACTTTAGCTTATATGCTAACTGAATAGG
 
. : . : . : . : . : . :
rJMSF007D11+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMFF017K16+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMSF009B07+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMFF037H18+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMSF014K09+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCNCAAGTTGTCCTTTTN
rJMSF024G14+ CTATTTAGAGAACTGATTCATTCCAACNTCTNGTCCTTCAATCCCCAAGNTGTCCNNTTT
rJMFF011A20+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMSF016K07+ TCAATCCCCAAGTTGTCCNTTTT
rJMSF015I11+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMSF021M09+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMSF014L09+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMSF049P11+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
rJMSF012F19+ CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
                      ____________________________________________________________
consensus CTATTTAGAGAACTGTTTCATTCCAACTTCTTGTCCTTCAATCCCCAAGTTGTCCTTTTT
 
. : . : . : . : . : . :
rJMSF007D11+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMFF017K16+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMSF009B07+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMFF037H18+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMSF014K09+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTNTTATACTTTAC
rJMSF024G14+ TCCTCTTTACATTCTTATCTTCNTTCTNTAGNTTAGATAGGTTTCAGTTTTATNCTTTAC
rJMFF011A20+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMSF016K07+ NCCTCTTAACATTCTTATNTNCTTTCNATAGNTTNGATAGGTNTCAGTTNTATNCTNTAG
rJMSF015I11+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMSF021M09+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMSF014L09+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMSF049P11+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
rJMSF012F19+ TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
                      ____________________________________________________________
consensus TCCTCTTTACATTCTTATCTTCTTTCTTTAGTTTAGATAGGTTTCAGTTTTATACTTTAC
 
. : . : . : . : . : . :
rJMSF007D11+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMFF017K16+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF009B07+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMFF037H18+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF014K09+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF024G14+ TAGNAGAAGANGCNNTCNCCTTCGCCATGTTTCNGGTNTTTTATAAGAAAATGGGAAGGG
rJMFF011A20+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
JMFN028J17- AAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF016K07+ TAGTAGAAGATGCTTTCTCNTTNGCCATGTTTCTGGTNAANTATAAGAAAATGGGAAGGN
rJMSF015I11+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF021M09+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF014L09+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF049P11+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
rJMSF012F19+ TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
                      ____________________________________________________________
consensus TAGTAGAAGATGCTTTCTCCTTCGCCATGTTTCTGGTTTTTTATAAGAAAATGGGAAGGG
 
. : . : . : . : . : . :
rJMSF007D11+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMFF017K16+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF009B07+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMFF037H18+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF014K09+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF024G14+ GAAAGCCAAGTTGGCNACATCCACCTCTGCT
rJMFF011A20+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTTGTGTTCTTTTGTTGTTAGCTGAGTTCTC
JMFN028J17- GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF016K07+ GAAAGCCAAGTNGGCTACATCCACCTNTGCTCGTGTTCTTNNGNNGTTAGCTGAGTTNTC
rJMSF015I11+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF021M09+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF014L09+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF049P11+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
rJMSF012F19+ GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
                      ____________________________________________________________
consensus GAAAGCCAAGTTGGCTACATCCACCTCTGCTCGTGTTCTTTTGTTGTTAGCTGAGTTCTC
 
. : . : . : . : . : . :
rJMSF007D11+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMFF017K16+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMSF009B07+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMFF037H18+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMSF014K09+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMFF011A20+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
JMFN028J17- TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMSF016K07+ TCTGCTAATCANGNTATCCACNCTTCAATTCCANGGATCCATGNNNTNTCNGGAGAATAG
rJMSF015I11+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMSF021M09+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMSF014L09+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMSF049P11+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
rJMSF012F19+ TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
                      ____________________________________________________________
consensus TCTGCTAATCATGTTATCCACACTTCAATTCCAAGGATCCATGTTTTCTCTGGAGAATAG
 
. : . : . : . : . : . :
rJMSF007D11+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMFF017K16+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMSF009B07+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMFF037H18+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMSF014K09+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMFF011A20+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
JMFN028J17- TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMSF016K07+ TCGATTATACCAAGCNGNTGNTCACAAGCCCNGATANGNCGGAANGAANGGAAGAAAGGT
rJMSF015I11+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMSF021M09+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMSF014L09+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMSF049P11+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
rJMSF012F19+ TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
                      ____________________________________________________________
consensus TTGATTATACCAAGCTGCTGTTCACAAGCCCTTATATGGCGGAACGAATGGAAGAAAGGT
 
. : . : . : . : . : . :
rJMSF007D11+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMFF017K16+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMSF009B07+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMFF037H18+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMSF014K09+ TGTTTCTGAACCTAGCNGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCNGT
rJMFF011A20+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
JMFN028J17- TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMSF016K07+ TGTTTCTGAACCTAGCTGTANGCGTTCTTGTTCNTGNTCTAGCTGGCGGTGTTCGTCTGT
rJMSF015I11+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMSF021M09+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMSF014L09+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMSF049P11+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
rJMSF012F19+ TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
                      ____________________________________________________________
consensus TGTTTCTGAACCTAGCTGTATGCGTTCTTGTTCTTGTTCTAGCTGGCGGTGTTCGTCTGT
 
. : . : . : . : . : . :
rJMSF007D11+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMFF017K16+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMSF009B07+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMFF037H18+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMSF014K09+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMFF011A20+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
JMFN028J17- GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMSF016K07+ GGGTTNTTTTATTCCANTTNTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGNTANGG
rJMSF015I11+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMSF021M09+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMSF014L09+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMSF049P11+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
rJMSF012F19+ GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
                      ____________________________________________________________
consensus GGGTTATTTTATTCCATTTCTAGTGGTGTCTGTAATTTGGTTACTCCCCGTATGGTATGG
 
. : . : . : . : . : . :
rJMSF007D11+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMFF017K16+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMSF009B07+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMFF037H18+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMSF014K09+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMFF011A20+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
JMFN028J17- TAACAAGCTGCGATTATGTGCAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMSF016K07+ TAACAAGCTGCGANTATGTGTAANGTCCTNTAANTGGTCATGCACTCACTTCACAAGTCA
rJMSF015I11+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMSF021M09+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMSF014L09+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMSF049P11+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
rJMSF012F19+ TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
                      ____________________________________________________________
consensus TAACAAGCTGCGATTATGTGTAATGTCCTGTAATTGGTCATGCACTCACTTCACAAGTCA
 
. : . : . : . : . : . :
rJMSF007D11+ -CAAGTACTCAATCCCTAAGTAGTCATATGGG
rJMFF017K16+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTT
rJMSF009B07+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTT
rJMFF037H18+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTTTTGTTAAAA
rJMSF014K09+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCNTTGTCTGTCTTCTGTTAAAAA
rJMFF011A20+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTT
JMFN028J17- -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTTTTGTTAAAAA
rJMSF016K07+ NCAAGCACTCAATCCCNAAGTAGTCATATG
rJMSF015I11+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTTTTGTTAAAAA
rJMSF021M09+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTTTTGTAAAAA
rJMSF014L09+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTTTTGTTAAAAA
rJMSF049P11+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTTT
rJMSF012F19+ -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCCTTTGTTAAAAA
                      ____________________________________________________________
consensus -CAAGTACTCAATCCCTAAGTAGTCATATGGGTAATGCTTTGTCTGTCTTTTGTTAAAAA
 
. : . : . : . : . : . :
rJMSF014K09+ TGAATGTTTTTGTCGTTTGAC
JMFN028J17- TGAATGTTTTTGTCGTTTGACTGTGTTCTTCTCT
rJMSF015I11+ TGAATGTTTTTGTCGTTTGACTGTGTTCTTCTCT
rJMSF014L09+ TGAATGTTTTTGTCGTTTGACTGTGTTCTTCTCTAAATGGT
rJMSF012F19+ TGAATGTTTTTGTCGTTTGACTGTGTTCTTCTCTAAATGGTGTGTAGTGGTTGTTGAGAT
                      ____________________________________________________________
consensus TGAATGTTTTTGTCGTTTGACTGTGTTCTTCTCTAAATGGTGTGTAGTGGTTGTTGAGAT