Contig 007060:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-                        TTTGTCTTACACTTTTTGGCCAATGAATGACTTGATGAAATGTTCTA
                      ____________________________________________________________
consensus                          TTTGTCTTACACTTTTTGGCCAATGAATGACTTGATGAAATGTTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           TTTATGCTTATACCACTCCATGCAAGTAGGCATCATGTGTAGTCTGTCTAATCAATGCTT
                      ____________________________________________________________
consensus             TTTATGCTTATACCACTCCATGCAAGTAGGCATCATGTGTAGTCTGTCTAATCAATGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           TGAAATCTTAGGAAGTAAGAGAGGAACCTTCTCTTCTAAATTTCATATTCTTGCGTGGCG
                      ____________________________________________________________
consensus             TGAAATCTTAGGAAGTAAGAGAGGAACCTTCTCTTCTAAATTTCATATTCTTGCGTGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           TTTGAGACTTCTATGATAAATCATCAAAATCTATTACTGACTGAGGTTGAAAATATGTGT
                      ____________________________________________________________
consensus             TTTGAGACTTCTATGATAAATCATCAAAATCTATTACTGACTGAGGTTGAAAATATGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           ACGTTTCTTGATTGAAAGAAAAGGAGTAAATGGCTTTTGAGATCTTTTTTTCTTTCTTTT
                      ____________________________________________________________
consensus             ACGTTTCTTGATTGAAAGAAAAGGAGTAAATGGCTTTTGAGATCTTTTTTTCTTTCTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           TTGCTGTAACAGGAATAAGCTTGCACAACTTTCCAGAGGGAATGGCTGTGTTCCTTGGAT
                      ____________________________________________________________
consensus             TTGCTGTAACAGGAATAAGCTTGCACAACTTTCCAGAGGGAATGGCTGTGTTCCTTGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           CAATCAAGGGTCTTCGAGTTGGTATCAATTTGGCCCTTGCCATTTCGTTGCACAACATCC
rJMSF012F11+                                                            CACAACATCC
                      ____________________________________________________________
consensus             CAATCAAGGGTCTTCGAGTTGGTATCAATTTGGCCCTTGCCATTTCGTTGCACAACATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           CAGAGGGTGTTGCGGTTGCACTTCCAGTTTATTTTGCAACTCAGAGCAAATGGCAGGCTT
rJMSF012F11+          CAGAGGGTGTTGCGGTTGCACTTCCAGTTTATTTTGCAACTCAGAGCAAATGGCAGGCTT
                      ____________________________________________________________
consensus             CAGAGGGTGTTGCGGTTGCACTTCCAGTTTATTTTGCAACTCAGAGCAAATGGCAGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           TCAAGATTGCTACACTTTCCGGCTTGGCAGAGCCCTTGGGTGTGATTATTGTAGCCTATC
rJMSF012F11+          TCAAGATTGCTACACTTTCCGGCTTGGCAGAGCCNTTGGGTGTGATTATTGTAGCCTATC
                      ____________________________________________________________
consensus             TCAAGATTGCTACACTTTCCGGCTTGGCAGAGCCCTTGGGTGTGATTATTGTAGCCTATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           TATTTCCAAGCAGCTTAAGTCCTGAAGTTCTGGAGGGCCTCCTTGGATCGGTTGGTGGGG
rJMSF012F11+          TATTTCCAAGCAGCTTAAGTCCTGAAGTTCTGGAGGGCCTCCTNGGATCGGTTGGTGGGG
                      ____________________________________________________________
consensus             TATTTCCAAGCAGCTTAAGTCCTGAAGTTCTGGAGGGCCTCCTTGGATCGGTTGGTGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044L09-           TGATGGCTTTCCTA                                              
rJMSF012F11+          TGATGGCTTTCCTAACCCTGCACGAAATGCTGCCACTGGCATTTGACTATGCGGGCCAAA
                      ____________________________________________________________
consensus             TGATGGCTTTCCTAACCCTGCACGAAATGCTGCCACTGGCATTTGACTATGCGGGCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012F11+          AGAACGCAGTCAAGGCTGTGTTTCTTGGAATGGCTTTCATGTCTGCTAGCCTGTATTTCN
                      ____________________________________________________________
consensus             AGAACGCAGTCAAGGCTGTGTTTCTTGGAATGGCTTTCATGTCTGCTAGCCTGTATTTCN
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012F11+          TACAGACCAGCTTACCGGAGGATATGAGCTTGTAGTTTNTGATCATACGACGCCAACCTG
                      ____________________________________________________________
consensus             TACAGACCAGCTTACCGGAGGATATGAGCTTGTAGTTTNTGATCATACGACGCCAACCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012F11+          AGAGTCCAATAGTTCTTCTAACCATGTTTGGAAACCCCACCCCCACCCCCACTCTTCCTC
                      ____________________________________________________________
consensus             AGAGTCCAATAGTTCTTCTAACCATGTTTGGAAACCCCACCCCCACCCCCACTCTTCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012F11+          CTTCTCCATGGATGAAGGGTCACAAGAAGNGAATAGTAGAAGNCAGGAAAACGANTATTT
                      ____________________________________________________________
consensus             CTTCTCCATGGATGAAGGGTCACAAGAAGNGAATAGTAGAAGNCAGGAAAACGANTATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012F11+          GTAAAATGAGGGATATTGCAAATTCACTGTATATGTGACNGACTGACTANATACTCATCA
                      ____________________________________________________________
consensus             GTAAAATGAGGGATATTGCAAATTCACTGTATATGTGACNGACTGACTANATACTCATCA