Contig 007059:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004O05Sequence262005885 (5)emb|CBI15515.3|1e-04unnamed protein product [Vitis vinifera]213007059 (3)
JMSF012F01Sequence270010480 (4)659007059 (3)ref|XP_011085536.1|7e-69PREDICTED: BTB/POZ domain-containing protein At3g50780-like [Sesamum indicum] r
JMSF050F11Sequence643010480 (4)ref|XP_002275454.1|2e-20PREDICTED: BTB/POZ domain-containing protein At3g50780 [Vitis vinifera] emb|CBI789007059 (3)ref|XP_009776607.1|8e-100PREDICTED: BTB/POZ domain-containing protein At3g50780 [Nicotiana sylvestris] r

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF050F11+ CGAACGAGCTGCAGAACCCGAGCTTAGCAACAGCTCGAGTCCGAAGCAGANTGCCTTAC
                      ____________________________________________________________
consensus CGAACGAGCTGCAGAACCCGAGCTTAGCAACAGCTCGAGTCCGAAGCAGANTGCCTTAC
 
. : . : . : . : . : . :
rJMSF050F11+ AGGCCGATAACCTCACGTGGATGCTCGAGATGTTAAGCGACAGGCAAGCGGCCGACGGGT
                      ____________________________________________________________
consensus AGGCCGATAACCTCACGTGGATGCTCGAGATGTTAAGCGACAGGCAAGCGGCCGACGGGT
 
. : . : . : . : . : . :
rJMSF050F11+ TTGCAACGTTGTGGGCTAGCCAGCAAGAGCTGGCTTCGCTGCACCCGAGGCTCCCCACTA
                      ____________________________________________________________
consensus TTGCAACGTTGTGGGCTAGCCAGCAAGAGCTGGCTTCGCTGCACCCGAGGCTCCCCACTA
 
. : . : . : . : . : . :
rJMSF050F11+ TCGCCCGCCACCACGTCAGCTGCATCACGGCGAGGCTGTTCGTCGGGATAGGCAGAGGCG
rJMSF012F01+ CGCCCGCCACCACGTCAGCTGCATCACGGCGAGGCTGTTCGTCGGGATAGGCAGAGGCG
                      ____________________________________________________________
consensus TCGCCCGCCACCACGTCAGCTGCATCACGGCGAGGCTGTTCGTCGGGATAGGCAGAGGCG
 
. : . : . : . : . : . :
rJMSF050F11+ AGATCCTTCCCTCGAAGGACACCCGCCATCTCCTGTTGCAAACGTGGTTGCAGCCGTTGA
rJMSF012F01+ AGATCCTTCCCTCGAAGGACACCCGCCATCTCCTGTTGCAAACGTGGTTGCAGCCGTTGA
                      ____________________________________________________________
consensus AGATCCTTCCCTCGAAGGACACCCGCCATCTCCTGTTGCAAACGTGGTTGCAGCCGTTGA
 
. : . : . : . : . : . :
rJMSF050F11+ TAAACGACTACAGCTGGCTACAACACAGCAGCAGATCGTTCGACAGGAAGGTCGTCGAGG
rJMSF012F01+ TAAACGACTACAGCTGGCTACAACACAGCAGCAGATCGTTCGACAGGAAGGTCGTCGAGG
                      ____________________________________________________________
consensus TAAACGACTACAGCTGGCTACAACACAGCAGCAGATCGTTCGACAGGAAGGTCGTCGAGG
 
. : . : . : . : . : . :
rJMSF050F11+ AAGGGATCGGGAGGACAATCCTGACGCTCCCTCTCGAGGAGCAGCAGAGCATTCTGCTGT
rJMSF012F01+ AAGGGATCGGGAGGACAATCCTGACGCTCCCTCTCGAGGAGCAGCAGAGCATTCTGCTGT
                      ____________________________________________________________
consensus AAGGGATCGGGAGGACAATCCTGACGCTCCCTCTCGAGGAGCAGCAGAGCATTCTGCTGT
 
. : . : . : . : . : . :
rJMSF050F11+ CTTGGCTCGACACGTTTCTCAAGGCGGGCGATAACTGCCCGAATCTCCAGAGAGCCTTTG
rJMSF012F01+ CTTGGCTCGACACGTTTCTCAAGGCGGGCGATAACTGCCCGAATCTCCAGAGAGCCTTTG
                      ____________________________________________________________
consensus CTTGGCTCGACACGTTTCTCAAGGCGGGCGATAACTGCCCGAATCTCCAGAGAGCCTTTG
 
. : . : . : . : . : . :
rJMSF050F11+ AAGTGTGGTGGCGCCGCACTTTCATCAGACCCTATACCGAAGCAGAAAGCATCGGCCAAA
rJMSF004O05+ AAGCAGAAAGCATCGGCCAAA
rJMSF012F01+ AAGTGTGGTGGCGCCGCACTTTCATCAGACCCTATACCGAAGCAGAAAGCATCGGCCAAA
                      ____________________________________________________________
consensus AAGTGTGGTGGCGCCGCACTTTCATCAGACCCTATACCGAAGCAGAAAGCATCGGCCAAA
 
. : . : . : . : . : . :
rJMSF050F11+ CGGGAAACTCTGCAGGGCCACAGGTGTTACACCCGGTATCTGAAAACCAAGAAAGAAGTG
rJMSF004O05+ CGGGAANCTCTGCAGGGCCACAGGTGTTACACCCGGTATNTGAAAACCAAGAAAGAAGTG
rJMSF012F01+ CGGGAAACTCTGCAGGGCCACAGGTGTTACACCCGGTATCTGAAAACCAAGAAAGAAGTG
                      ____________________________________________________________
consensus CGGGAAACTCTGCAGGGCCACAGGTGTTACACCCGGTATCTGAAAACCAAGAAAGAAGTG
 
. : . : . : . : . : . :
rJMSF050F11+ AAGAATTGTAAATCTGGCTACCACCCGACTATCAACTGAGCTACCCGTGCTGGACTATCA
rJMSF004O05+ AAGAANTGTAAATNTGGCTACCACCCGANTATCAANTGAGCTNCCCGTGNTGGACTATCA
rJMSF012F01+ AAGAATTGTAAATCTGGCTACCACCCGACTATCAACTGAGCTACCCGTGCTGGACTATCA
                      ____________________________________________________________
consensus AAGAATTGTAAATCTGGCTACCACCCGACTATCAACTGAGCTACCCGTGCTGGACTATCA
 
. : . : . : . : . : . :
rJMSF050F11+ ACTGAGCTACCCGTGCGGGTTTCATTACATGACGACCAACAATGTTGTTGTATGATTGAG
rJMSF004O05+ ACTGAGCTACCCGTGCGGGTTTCATTACATGACGACCAACAATGTTGNTGTATGA
rJMSF012F01+ ACTGAGCTACCCGTGCGGGTTTCATTACATGACGACCAACAATGTTGTTGTATGATTGAG
                      ____________________________________________________________
consensus ACTGAGCTACCCGTGCGGGTTTCATTACATGACGACCAACAATGTTGTTGTATGATTGAG
 
. : . : . : . : . : . :
rJMSF050F11+ GTTTAATTGCTTATTGAATGTATGTATTTAGATGTATCTTAAAAGGGATGTAATACATGT
rJMSF012F01+ GTTTAATTGCTTATTGAATGTATGTATTTAGATGTATCTTAAAAGGGATGTAATACATGT
                      ____________________________________________________________
consensus GTTTAATTGCTTATTGAATGTATGTATTTAGATGTATCTTAAAAGGGATGTAATACATGT
 
. : . : . : . : . : . :
rJMSF050F11+ CTCATTGGTG
rJMSF012F01+ CTCATTGGTGTGTTTTCTGTCATCCTAAGGTTGTTTAATGTAGTCTGAGTTTTGACTCTA
                      ____________________________________________________________
consensus CTCATTGGTGTGTTTTCTGTCATCCTAAGGTTGTTTAATGTAGTCTGAGTTTTGACTCTA