Contig 007055:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011K13Sequence407007055 (2)ref|XP_006338517.1|6e-37PREDICTED: protein CREG1-like [Solanum tuberosum]748007055 (2)ref|XP_009615033.1|3e-84PREDICTED: protein CREG1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011K13-             GGACGAAATTATTCCAAAGCGCCGTGTCATTGGTATTTCAGACACACAAGTCCGACAA
                      ____________________________________________________________
consensus               GGACGAAATTATTCCAAAGCGCCGTGTCATTGGTATTTCAGACACACAAGTCCGACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011K13-           GGAGCCCCCTTCTTATCTTCTCCGATTTACATACGATAATGGCGATCGAAAGGATTGGTA
                      ____________________________________________________________
consensus             GGAGCCCCCTTCTTATCTTCTCCGATTTACATACGATAATGGCGATCGAAAGGATTGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011K13-           GTGCCACTCTATATTCTTTGATTTTGTTATTGGCTCTTCTTCAAGTAGAATCTGTTCATG
                      ____________________________________________________________
consensus             GTGCCACTCTATATTCTTTGATTTTGTTATTGGCTCTTCTTCAAGTAGAATCTGTTCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011K13-           GACGGCCTTTCCTACTGTCTGCCCCCAGACCTTCGCCGGAAGATGCTGCCGCCTTTGCTC
rJMSF011K13+                                          TCGCCGGAAGATGCTGCCGCCTTTGCTC
                      ____________________________________________________________
consensus             GACGGCCTTTCCTACTGTCTGCCCCCAGACCTTCGCCGGAAGATGCTGCCGCCTTTGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011K13-           GGTGGTTAGTTTCCCAGAGTTCGTGGGGTGTCCTCAATACAATTGCAAGTGATTTAGGAG
rJMSF011K13+          GGTGGTTAGTTTCCCAGAGTTCGTGGGGTGTCCTCAATACAATTGCAAGTGATTTAGGAG
                      ____________________________________________________________
consensus             GGTGGTTAGTTTCCCAGAGTTCGTGGGGTGTCCTCAATACAATTGCAAGTGATTTAGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011K13-           GAGCACCTTTTGGGAACGTTGTATCATTTAGCGATGGACCACCTGACAAGAGTAGTGGAA
rJMSF011K13+          GAGCACCTTTTGGGAACGTTGTATCATTTAGCGATGGACCACCTGACAAGAGTAGTGGAA
                      ____________________________________________________________
consensus             GAGCACCTTTTGGGAACGTTGTATCATTTAGCGATGGACCACCTGACAAGAGTAGTGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011K13-           CTCCATACTTCTATTTAACGACCCTTGATCCCACTGCAGATTATGGATT           
rJMSF011K13+          CTCCATACTTCTATTTAACGACCCTTGATCCCACTGCAGATTATGGATTGAAAGACTCAA
                      ____________________________________________________________
consensus             CTCCATACTTCTATTTAACGACCCTTGATCCCACTGCAGATTATGGATTGAAAGACTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          GGTCGTCCTTCACGATCAGTGAATATCCCCTTGGAACTTGTGGGGATAAAGATCCCGAGA
                      ____________________________________________________________
consensus             GGTCGTCCTTCACGATCAGTGAATATCCCCTTGGAACTTGTGGGGATAAAGATCCCGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          ATCCTACCTGCTCTAAAATCACGCTGACAGGAAAGTTCAAATTGCTTGATGGAAATCCAG
                      ____________________________________________________________
consensus             ATCCTACCTGCTCTAAAATCACGCTGACAGGAAAGTTCAAATTGCTTGATGGAAATCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          AGGAAACCCAATTTGCTCAAACTGCATTGTTCACAAAGCACCCTGAGATGACAGGCTGGC
                      ____________________________________________________________
consensus             AGGAAACCCAATTTGCTCAAACTGCATTGTTCACAAAGCACCCTGAGATGACAGGCTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          CAGAGAATCACAATTTCCAAATCTTCAAACTAGAAATTGAAGAGATATTTCTCATCAATT
                      ____________________________________________________________
consensus             CAGAGAATCACAATTTCCAAATCTTCAAACTAGAAATTGAAGAGATATTTCTCATCAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          GGTATGGTGGCCCTAAACCCCTTACAGTTGATCAGTACCTGCGAAGCCAAATTCCAAATT
                      ____________________________________________________________
consensus             GGTATGGTGGCCCTAAACCCCTTACAGTTGATCAGTACCTGCGAAGCCAAATTCCAAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          CAAAACCGGACAAAATGGTTTCTTTCAAACGTTTGATATCAACATCTGTCAACTTCTTGT
                      ____________________________________________________________
consensus             CAAAACCGGACAAAATGGTTTCTTTCAAACGTTTGATATCAACATCTGTCAACTTCTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          CATGGCTGAATCAAAGCCTTTAATGCAAGCTATGGTGTGAAGATAATTGGCTTCTGATAT
                      ____________________________________________________________
consensus             CATGGCTGAATCAAAGCCTTTAATGCAAGCTATGGTGTGAAGATAATTGGCTTCTGATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          GTTTATTTCTAGTTATCATGTGTGCACATGCATACAGATTTGTGTTATAGATACACGTTC
                      ____________________________________________________________
consensus             GTTTATTTCTAGTTATCATGTGTGCACATGCATACAGATTTGTGTTATAGATACACGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011K13+          AAATTTAAGTGCAAATAAAGCCTTGGCAAAATGTATATATATTAAGGATGAAAAAAATTC
                      ____________________________________________________________
consensus             AAATTTAAGTGCAAATAAAGCCTTGGCAAAATGTATATATATTAAGGATGAAAAAAATTC