Contig 007050:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010I14Sequence472010604 (2)ref|XP_008359950.1|6e-39PREDICTED: alpha-L-fucosidase 1-like [Malus domestica]774007050 (2)gb|EYU37042.1|3e-48hypothetical protein MIMGU_mgv1a004219mg [Erythranthe guttata]
JMSF047C16Sequence715010604 (2)ref|XP_009335969.1|1e-118PREDICTED: alpha-L-fucosidase 1-like [Pyrus x bretschneideri]758007050 (2)emb|CDP07048.1|4e-47unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF047C16+                              AGAGGTACAAGTGACTTCCGATTTGCCCCCTATAATGTTA
rJMSF010I14+                CTGCCAGCAGCACCAGAGGTACAAGTGACTTCCGATTTGCCCCCTATAATGTTA
                      ____________________________________________________________
consensus                   CTGCCAGCAGCACCAGAGGTACAAGTGACTTCCGATTTGCCCCCTATAATGTTA
 
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rJMSF047C16+          TTAAAGAAGGCATCTATACTTATTGGGCTCCAGGACGAGAGCAATCGGAAATCATATTAT
rJMSF010I14+          TTAAAGAAGGCATCTATACTTATTGGGCTCCAGGACGAGAGCAATCGGAAATCATATTAT
                      ____________________________________________________________
consensus             TTAAAGAAGGCATCTATACTTATTGGGCTCCAGGACGAGAGCAATCGGAAATCATATTAT
 
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rJMSF047C16+          ACTTGGATTTTCAAGAACAAGTGACGTTCAACATGTTAGAAGTTCAAGAGCCAATCCATA
rJMSF010I14+          ACTTGGATTTTCAAGAACAAGTGACGTTCAACATGTTAGAAGTTCAAGAGCCAATCCATA
                      ____________________________________________________________
consensus             ACTTGGATTTTCAAGAACAAGTGACGTTCAACATGTTAGAAGTTCAAGAGCCAATCCATA
 
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rJMSF047C16+          TGGGGCAGCGGATTATTGCATTCCATCTCGATGTATTGAACGAATTTGGGGAATGGCAGG
rJMSF010I14+          TGGGGCAGCGGATTATTGCATTCCATCTCGATGTATTGAACGAATTTGGGGAATGGCAGG
                      ____________________________________________________________
consensus             TGGGGCAGCGGATTATTGCATTCCATCTCGATGTATTGAACGAATTTGGGGAATGGCAGG
 
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rJMSF047C16+          AAGTAATAGATGGAACGACGGTGGGATACCGGAGGTTGCTGTTATTTCCCGTGGTTAAAA
rJMSF010I14+          AAGTAATAGATGGAACGACGGTGGGATACCGGAGGTTGCTGTTATTTCCCGTGGTTAAAA
                      ____________________________________________________________
consensus             AAGTAATAGATGGAACGACGGTGGGATACCGGAGGTTGCTGTTATTTCCCGTGGTTAAAA
 
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rJMSF047C16+          CGTATAGTATAAGAGTTGTGATTGACGAGTGTCGGGAAGAACCTTTGATCTCTTATTTGG
rJMSF010I14+          CGTATAGTATAAGAGTTGTGATTGACGAGTGTCGGGAAGAACCTTTGATCTCTTATTTGG
                      ____________________________________________________________
consensus             CGTATAGTATAAGAGTTGTGATTGACGAGTGTCGGGAAGAACCTTTGATCTCTTATTTGG
 
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rJMSF047C16+          GATTATATATGGATCCCTATTCTAATCTGGAACACAAGTCTAGTTCATGGTTTGGATCGC
rJMSF010I14+          GATTATATATGGATCCCTATTCTAATCTGGAACACAAGTCTAGTTCATGGTTTGGATCGC
                      ____________________________________________________________
consensus             GATTATATATGGATCCCTATTCTAATCTGGAACACAAGTCTAGTTCATGGTTTGGATCGC
 
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rJMSF047C16+          TGCGCTTCAATGGCAGCCGGGTGAGGGAATGGCTTTCTGGTTTTATGTAGGCCTGGCTGG
rJMSF010I14+          TGCGCTTCAATGGCAGCCGGGTGAGGGAATGGCTTTCTGGTTTTATGTAGGCCTGGCTGG
                      ____________________________________________________________
consensus             TGCGCTTCAATGGCAGCCGGGTGAGGGAATGGCTTTCTGGTTTTATGTAGGCCTGGCTGG
 
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rJMSF047C16+          ATTTCAACGCCAACGAAAATGTTATGTTGTTTGCAGTGGGGAAGGCTAAAGCAAAAGCAG
rJMSF010I14+          ATTTCAACGCCAACGAAAATGTTATGTTGTTTGCAGTGGGGAAGGCTAAAGCAAAAGCAG
                      ____________________________________________________________
consensus             ATTTCAACGCCAACGAAAATGTTATGTTGTTTGCAGTGGGGAAGGCTAAAGCAAAAGCAG
 
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rJMSF047C16+          AATGCAATAAGGTATTGCACAGAAGTTTGGTCTGTCATGGGATGCATTTCTTGCTATAAA
rJMSF010I14+          AATGCAATAAGGTATTGCACAGAAGTTTGGTCTGTCATGGGATGCATTTCTTGCTATAAA
                      ____________________________________________________________
consensus             AATGCAATAAGGTATTGCACAGAAGTTTGGTCTGTCATGGGATGCATTTCTTGCTATAAA
 
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rJMSF047C16+          TCCAGTTTTGTTGGTGAATGGGCATGAAGAAGTGAATCTAAGAAACCAAAACAACTTGTT
rJMSF010I14+          TCCAGTTTTGTTGGTGAATGGGCATGAAGAAGTGAATCTAAGAAACCAAAACAACTTGCT
                      ____________________________________________________________
consensus             TCCAGTTTTGTTGGTGAATGGGCATGAAGAAGTGAATCTAAGAAACCAAAACAACTTGTT
 
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rJMSF047C16+          TTGGATTAATCGTAGCTTCAATGCTTCATTCATGATAATGGAAGGATCTTTTCTGTCTCA
rJMSF010I14+          TTGGATTAATCGTAGCTTCAATGCTTCATTCATGATAATGGAAGGATCTTTTCTGTCTCA
                      ____________________________________________________________
consensus             TTGGATTAATCGTAGCTTCAATGCTTCATTCATGATAATGGAAGGATCTTTTCTGTCTCA
 
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rJMSF047C16+          TTTAGCAAATTTAAAGTGACAGTACATTTATCATTTTACATATA                
rJMSF010I14+          TTTAGCAAATTTAAAGTGACAGTACATTTATCATTTTACATATATTATGTTCAAATTAGA
                      ____________________________________________________________
consensus             TTTAGCAAATTTAAAGTGACAGTACATTTATCATTTTACATATATTATGTTCAAATTAGA