Contig 007045:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004K01Sequence439003572 (2)emb|CDP03382.1|7e-82unnamed protein product [Coffea canephora]517007045 (3)ref|XP_009609403.1|3e-72PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]
JMSF004K03Sequence391000998 (8)440007045 (3)ref|XP_009609403.1|6e-55PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]
JMSF009O14Sequence192003572 (2)emb|CDP03382.1|1e-32unnamed protein product [Coffea canephora]739007045 (3)emb|CDP03382.1|7e-115unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF009O14+                                                  TGAAAGATTTGTGTCATATA
                      ____________________________________________________________
consensus                                                     TGAAAGATTTGTGTCATATA
 
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rJMSF009O14+          GAGAGAGAGCTGCAGGGATGTATTCAGCATTACCATTTGCATTTGCCCAGGTTGTTATTG
                      ____________________________________________________________
consensus             GAGAGAGAGCTGCAGGGATGTATTCAGCATTACCATTTGCATTTGCCCAGGTTGTTATTG
 
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rJMSF009O14+          AGTTCCCATACGTGTTTGGGCAAACACTAATCTACAGCGCTATATTCTATTCCCTGGCAG
                      ____________________________________________________________
consensus             AGTTCCCATACGTGTTTGGGCAAACACTAATCTACAGCGCTATATTCTATTCCCTGGCAG
 
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rJMSF009O14+          CTTTTGAATGGTCTGCTTCAAAATTTCTTTGGTATATATTCTTTATGTATTTTACAGTTT
                      ____________________________________________________________
consensus             CTTTTGAATGGTCTGCTTCAAAATTTCTTTGGTATATATTCTTTATGTATTTTACAGTTT
 
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rJMSF004K01+                            GAATGATGACCACTGCGGTGACACCCAATCACAATGTGGCTG
rJMSF009O14+          TGTACTTCACCTTTTATGGAATGATGACCACTGCGGTGACACCCAATCACAATGTGGCTG
                      ____________________________________________________________
consensus             TGTACTTCACCTTTTATGGAATGATGACCACTGCGGTGACACCCAATCACAATGTGGCTG
 
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rJMSF004K01+          CCATTATTGCCGCCCCTTTCTATATGCTTTGGAACCTTTTCAGCGGGTTTATGATACCTC
rJMSF004K03+                                                 TCAGCGGGTTTATGATACCTC
rJMSF009O14+          CCATTATTGCCGCCCCTTTCTATATGCTTTGGAACCTTTTCAGCGGGTTTATGATACCTC
                      ____________________________________________________________
consensus             CCATTATTGCCGCCCCTTTCTATATGCTTTGGAACCTTTTCAGCGGGTTTATGATACCTC
 
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rJMSF004K01+          ACAAGAGAATACCGATATGGTGGAGATGGTATTACTGGGCAAATCCGGTCGCCNGGAGTC
rJMSF004K03+          ACAAGAGAATACCGATATGGTGGAGATGGTATTACTGGGCAAATCCGGTCGCCTGGAGTC
rJMSF009O14+          ACAAGAGAATACCGATATGGTGGAGATGGTATTACTGGGCAAATCCGGTCGCCTGGAGTC
                      ____________________________________________________________
consensus             ACAAGAGAATACCGATATGGTGGAGATGGTATTACTGGGCAAATCCGGTCGCCTGGAGTC
 
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rJMSF004K01+          TTTACGGGCTTGTTGCTTCCCAGTATAGTGACAGCGAAAGAGCGATTAAACTATCAGATG
rJMSF004K03+          TTTACGGGCTTGTTGCTTCCCAGTATAGTGACAGCGAAAGAGCGATTAAACTATCAGATG
rJMSF009O14+          TTTACGGGCTTGTTGCTTCCCAGTATAGTGACAGCGAAAGAGCGATTAAACTATCAGATG
                      ____________________________________________________________
consensus             TTTACGGGCTTGTTGCTTCCCAGTATAGTGACAGCGAAAGAGCGATTAAACTATCAGATG
 
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rJMSF004K01+          GGGTGGAGTCCACTCCTTTGAATCTATTAGTGAAGGTTGTGTTCGGATACAGGCATGATT
rJMSF004K03+          GGGTGGAGTCCACTCCTTTGAATCTATTAGTGAAGGTTGTGTTCGGATACAGGCATGATT
rJMSF009O14+          GGGTGGAGTCCACTCCTTTGAATCTATTAGTGAAGGTTGTGTTCGGATACAGGCATGATT
                      ____________________________________________________________
consensus             GGGTGGAGTCCACTCCTTTGAATCTATTAGTGAAGGTTGTGTTCGGATACAGGCATGATT
 
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rJMSF004K01+          TCATTGGCATNGCTGGTTNTATGGTGGTGGGCTTTTGCATTTTATTTGCAGTTATTTTTG
rJMSF004K03+          TCATTGGCATTGCTGGTTTTATGGTGGTGGGCTTTTGCATTTTATTTGCAGTTATTTTCG
rJMSF009O14+          TCATTGGCATTGCTGGTTTTATGGTGGTGGGCTTTTGCATTTTATTTGCAGTTATTTTTG
                      ____________________________________________________________
consensus             TCATTGGCATTGCTGGTTTTATGGTGGTGGGCTTTTGCATTTTATTTGCAGTTATTTTTG
 
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rJMSF004K01+          CNTATGCAATCAAATCGTTCAACTTCCAAAAGAGGTGATATAATGCACCCATGCATGGCG
rJMSF004K03+          CTTATGCAATCAAATCGTTCAACTTCCAAAAGAGGTGATATAATGCACCCATGCATGGCG
rJMSF009O14+          CTTATGCAATCAAATCGTTCAACTTCCAAAAGAGGTGATATAATGCACCCATGCATGGCG
                      ____________________________________________________________
consensus             CTTATGCAATCAAATCGTTCAACTTCCAAAAGAGGTGATATAATGCACCCATGCATGGCG
 
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rJMSF004K01+          ACAGATNGTTGATAATAGTGGAATATGAATATGGGGCTGTACAGACAGTTGAGGTGTATG
rJMSF004K03+          ACAGATTGTTNATAATAGTGGAATATGAATATGGGGCTGTACAGACAGTTGA-GTGTATG
rJMSF009O14+          ACAGATTGTTGATAATAGTGGAATATGAATATGGGGCTGTACAGACAGTTGA-GTGTATG
                      ____________________________________________________________
consensus             ACAGATTGTTGATAATAGTGGAATATGAATATGGGGCTGTACAGACAGTTGA-GTGTATG
 
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rJMSF004K01+          ATAATTATTNTGGTAAAAAGAGT                                     
rJMSF004K03+          ATAATTATTTTGGTAAAAAGAGT                                     
rJMSF009O14+          ATAATTATTTTGGTAAAAAGAGTGTTTAACTCTAGATACATACTCCCAGTAGTCATTCAT
                      ____________________________________________________________
consensus             ATAATTATTTTGGTAAAAAGAGTGTTTAACTCTAGATACATACTCCCAGTAGTCATTCAT