Contig 007044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS158D03Sequence504007044 (3)emb|CDP16326.1|8e-87unnamed protein product [Coffea canephora]
JMSF009O03Sequence292000508 (9)ref|XP_009624643.1|2e-10PREDICTED: 4-alpha-glucanotransferase DPE2 [Nicotiana tomentosiformis] ref|XP_00745007044 (3)emb|CDP16326.1|8e-93unnamed protein product [Coffea canephora]
JMSF011L24Sequence310000508 (9)ref|XP_009803735.1|116PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00747007044 (3)emb|CDP16326.1|2e-93unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS158D03-                                                             TGCGTTCATC
rJMSF011L24+                                          CTNGGCATGATTCCCGCNTGCGTTCATC
rJMSF009O03+                                             GGCATGATTCCCGCTTGCGTTCATC
                      ____________________________________________________________
consensus                                             CTNGGCATGATTCCCGCTTGCGTTCATC
 
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JMFS158D03-           CTGTGATGGAAGAGTGGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
rJMSF011L24+          CTGTGATGGAAGAGTTGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
rJMSF009O03+          CTGTGATGGAAGAGTTGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
                      ____________________________________________________________
consensus             CTGTGATGGAAGAGTTGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
 
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JMFS158D03-           GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
rJMSF011L24+          GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
rJMSF009O03+          GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
                      ____________________________________________________________
consensus             GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
 
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JMFS158D03-           ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
rJMSF011L24+          ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
rJMSF009O03+          ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
                      ____________________________________________________________
consensus             ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
 
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JMFS158D03-           TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
rJMSF011L24+          TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
rJMSF009O03+          TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
                      ____________________________________________________________
consensus             TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
 
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JMFS158D03-           ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
rJMSF011L24+          ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
rJMSF009O03+          ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
                      ____________________________________________________________
consensus             ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
 
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JMFS158D03-           ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
rJMSF011L24+          ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
rJMSF009O03+          ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
                      ____________________________________________________________
consensus             ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
 
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JMFS158D03-           ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
rJMSF011L24+          ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
rJMSF009O03+          ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
                      ____________________________________________________________
consensus             ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
 
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JMFS158D03-           TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
rJMSF011L24+          TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
rJMSF009O03+          TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
                      ____________________________________________________________
consensus             TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
 
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JMFS158D03-           ATCCGGGAAGG                                                 
rJMSF011L24+          ATCCGGGAAGGCTGCAGGATGTTGCTAGCGATCAAGGGAAAAGTGTTCCCTTGGCAGGGT
rJMSF009O03+          ATCCGGGAAGGCTGCAGGATGTTGCTAGCGATCAAGGGAAAAGTGTTCCCTTGGCAGGGT
                      ____________________________________________________________
consensus             ATCCGGGAAGGCTGCAGGATGTTGCTAGCGATCAAGGGAAAAGTGTTCCCTTGGCAGGGT
 
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rJMSF011L24+          AGGGAAGTGGAGTTTCCCAGAAAGAAATAGCAGCAGTCTAATGAGGTTGATATTGCTTTT
rJMSF009O03+          AGGGAAGTGGAGTTTCCCAGAAAGAAATAGCAGCAGTCTAATGAGGTTGATATTGCTTTT
                      ____________________________________________________________
consensus             AGGGAAGTGGAGTTTCCCAGAAAGAAATAGCAGCAGTCTAATGAGGTTGATATTGCTTTT
 
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rJMSF011L24+          ATTCCACTTCTAGATAGTAAATTATGCAGGACTGGCAATTGCTACTTTTACATTTTATGG
rJMSF009O03+          ATTCCACTTCTAGATAGTAAATTATGCAGGACTGGCAATTGCTACTTTTACATTTTATGG
                      ____________________________________________________________
consensus             ATTCCACTTCTAGATAGTAAATTATGCAGGACTGGCAATTGCTACTTTTACATTTTATGG
 
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rJMSF011L24+          TAGATTTCATGCTATTTATGTTGCTGTCATACACTGTAATCTGAATAATGATTATACAT 
rJMSF009O03+          TAGATTTCATGCTATTTATGTTGCTGTCATACACTGTAATCTGAATAATGATTATACATT
                      ____________________________________________________________
consensus             TAGATTTCATGCTATTTATGTTGCTGTCATACACTGTAATCTGAATAATGATTATACATT