Contig 007039:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019B05+                              ATCGGGAGGATTCAAGAAAACTGGAACAGCTTTACTGTGA
                      ____________________________________________________________
consensus                                 ATCGGGAGGATTCAAGAAAACTGGAACAGCTTTACTGTGA
 
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rJMSF019B05+          TCCTGTCCAGCGGTTAGTTGCTGATTGTATTCTTATGGATGCTGATACAGCTGCAGTTTC
rJMSF008O13+                CCAGCGGTTAGNTGCTGATTGTATTCTTATGGATGCTGATACAGCTGCAGTTTC
                      ____________________________________________________________
consensus             TCCTGTCCAGCGGTTAGTTGCTGATTGTATTCTTATGGATGCTGATACAGCTGCAGTTTC
 
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rJMSF019B05+          TGATCGAAAGGGGAGTGTTGCCATCTTGTCCTGTTTAAATCATTCAGAAGAGAATTCCAG
rJMSF008O13+          TGATCGAAAGGGGAGTGTTGCCATCTTGTCCTGTTTAAATCATTCAGAAGAGAATTCCAG
                      ____________________________________________________________
consensus             TGATCGAAAGGGGAGTGTTGCCATCTTGTCCTGTTTAAATCATTCAGAAGAGAATTCCAG
 
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rJMSF019B05+          TCCTGAAAGCAACTTAGCTGTAGTTTCATCATTTTACATGGGTGAAATTGCGATGCGGAT
rJMSF008O13+          TCCTGAAAGCAACTTAGCTGTAGTTTCATCATTTTACATGGGTGAAATTGCGATGCGGAT
                      ____________________________________________________________
consensus             TCCTGAAAGCAACTTAGCTGTAGTTTCATCATTTTACATGGGTGAAATTGCGATGCGGAT
 
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rJMSF019B05+          CCGAAAAGGCTCATTCTCCTACAAACTTCCTGCTGACGATGTTTTGAGGGGCTGTCGAGA
rJMSF008O13+          CCGAAAAGGCTCATTCTCCTACAAACTTCCTGCTGACGATGTTTTGAGGGGCTGTCGAGA
                      ____________________________________________________________
consensus             CCGAAAAGGCTCATTCTCCTACAAACTTCCTGCTGACGATGTTTTGAGGGGCTGTCGAGA
 
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rJMSF019B05+          CACTAATGGCGTTAGTGATGTGTCACAGAGTAGCATTATGGCTAGCACACTGTTAGGAAG
rJMSF008O13+          CACTAATGGCGTTAGTGATGTGTCACAGAGTAGCATTATGGCTAGCACACTGTTAGTAAG
                      ____________________________________________________________
consensus             CACTAATGGCGTTAGTGATGTGTCACAGAGTAGCATTATGGCTAGCACACTGTTAGTAAG
 
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rJMSF019B05+          CATAATTACTTTTGTTCCTCTGACAAGGGTGGAATATGAACTGTTAGAAGCAGTACAAGC
rJMSF008O13+          CATAATTACTTTTGTTCCTCTGACAAGGGTGGAATATGAACTGTTAGAAGCAGTACAAGC
                      ____________________________________________________________
consensus             CATAATTACTTTTGTTCCTCTGACAAGGGTGGAATATGAACTGTTAGAAGCAGTACAAGC
 
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rJMSF019B05+          AAGGCTTGTTATTCATCCATTGACTGCTCCTATACTCGGAAATGACCATAATGAGTTCCG
rJMSF008O13+          AAGGCTTGTTATTCATCCATTGACTGCTCCTATACTCGGAAATGACCATAATGAGTTCCG
                      ____________________________________________________________
consensus             AAGGCTTGTTATTCATCCATTGACTGCTCCTATACTCGGAAATGACCATAATGAGTTCCG
 
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rJMSF019B05+          CAGCCGTGAAAGTTCGGCTGGGGCACTGAGGGTACTTGATGGTGATATGCTTGCTCAGTT
rJMSF008O13+          CAGCCGTGAAAGTTCGGCTGGGGCACTGAGGGTACTTGATGGTGATATGCTTGCTCAGTT
                      ____________________________________________________________
consensus             CAGCCGTGAAAGTTCGGCTGGGGCACTGAGGGTACTTGATGGTGATATGCTTGCTCAGTT
 
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rJMSF019B05+          CTTGGAGCTGACTAGTATGCAACAAGAGGCTGTATTAGCGCTACCCCTTGGCTCACATAA
rJMSF008O13+          CTTGGAGCTGACTAGTATGCAACAAGAGGCTGTATTAGCGCTACCCCTTGGCTCACATAA
                      ____________________________________________________________
consensus             CTTGGAGCTGACTAGTATGCAACAAGAGGCTGTATTAGCGCTACCCCTTGGCTCACATAA
 
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rJMSF019B05+          TACAATCATGTTAAATTCAAAGCCCTTGCCTGCTCCTATTACTGTTAGTCAGGTTGTGCG
rJMSF008O13+          TACAATCATGTTAAATTCAAAGCCCTTGCCTGCTCCTATTACTGTTAGTCAGGTTGTGCG
                      ____________________________________________________________
consensus             TACAATCATGTTAAATTCAAAGCCCTTGCCTGCTCCTATTACTGTTAGTCAGGTTGTGCG
 
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rJMSF019B05+          TCTGCTGGAGCGGGTTCACTATGCACTGAATTGAGTAAAATCATTTTGTAAGAATACAAC
rJMSF008O13+          TCTGCTGGAGCGGGTTCACTATGCACTGAATTGAGTAAAATCATTTTGTAAGAATACAAC
                      ____________________________________________________________
consensus             TCTGCTGGAGCGGGTTCACTATGCACTGAATTGAGTAAAATCATTTTGTAAGAATACAAC
 
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rJMSF019B05+          CCCCGGCCTGTTCTATTTAGTTATACGATCTTCCAATCGAACCTGGGGTTTGCTCATTAT
rJMSF008O13+          CCCCGGCCTGTTCTATTTAGTTATACGATCTTCCAATCG-ACCTGGGGTTTGCTCATTAT
                      ____________________________________________________________
consensus             CCCCGGCCTGTTCTATTTAGTTATACGATCTTCCAATCGAACCTGGGGTTTGCTCATTAT
 
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rJMSF019B05+          GCCTTTTGTGTCATGTCAATATAAGTCCGAAAC                           
rJMSF008O13+          GCCTTTTGTGTCATGTCAATATAAGTCCGAAACCTTGTGCACATTTTTGTTACAGGTGTT
                      ____________________________________________________________
consensus             GCCTTTTGTGTCATGTCAATATAAGTCCGAAACCTTGTGCACATTTTTGTTACAGGTGTT