| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF037H20 | Sequence | 527 | 010324 (7) | ref|XP_006347869.1| | 4e-75 | PREDICTED: probable protein S-acyltransferase 14-like [Solanum tuberosum] | 742 | 007038 (3) | ref|XP_009798984.1| | 8e-27 | PREDICTED: probable protein S-acyltransferase 14, partial [Nicotiana sylvestris |
| JMSF008M19 | Sequence | 275 | 010324 (7) | ref|XP_006364242.1| | 3e-09 | PREDICTED: probable protein S-acyltransferase 14-like [Solanum tuberosum] | 730 | 007038 (3) | ref|XP_009798984.1| | 2e-22 | PREDICTED: probable protein S-acyltransferase 14, partial [Nicotiana sylvestris |
| JMSF016F17 | Sequence | 454 | 010324 (7) | ref|XP_009761491.1| | 6e-14 | PREDICTED: probable protein S-acyltransferase 14 [Nicotiana sylvestris] | 813 | 007038 (3) | ref|XP_009798984.1| | 1e-37 | PREDICTED: probable protein S-acyltransferase 14, partial [Nicotiana sylvestris |
This contig is upended
. : . : . : . : . : . :
rJMSF016F17+ CNGGGATTTTGGATTATGCATATCTCNTTGGTCTC
____________________________________________________________
consensus CNGGGATTTTGGATTATGCATATCTCNTTGGTCTC
. : . : . : . : . : . :
rJMFF037H20+ GCATATGAGAAGATGACTCTTTCAAGATGGCGATATGA
rJMSF016F17+ AAGGAATACCACANCCATCGAGGCATATGAGAAGATGACTCCTTCAAGATGGCGATATGA
rJMSF008M19+ GGCGATATGA
____________________________________________________________
consensus AAGGAATACCACANCCATCGAGGCATATGAGAAGATGACTCTTTCAAGATGGCGATATGA
. : . : . : . : . : . :
rJMFF037H20+ CCTTGGTCGAAAAAGAAATTTTGAGCAGGTGTTTGGGATGGACAGACAGTATTGGTTTAT
rJMSF016F17+ CCTTGGTCGAAAAAGAAATTTTGAGCAGGTGTTTGGGATGGACAGACAGTATTGGTTTAT
rJMSF008M19+ CCTTGGTCGAAAAAGAAATTTTGAGCAGGTGTTTGGGATGGACAGACAGTATTGGTTTAT
____________________________________________________________
consensus CCTTGGTCGAAAAAGAAATTTTGAGCAGGTGTTTGGGATGGACAGACAGTATTGGTTTAT
. : . : . : . : . : . :
rJMFF037H20+ CCCAGCTTACTCGGAAGAAGATTTAAGATCATTACCTGCTCTCCACGGGCTTGAATATCC
rJMSF016F17+ CCCAGCTTACTCGGAAGAAGATTTAAGATCATTACCTGCTCTCCACGGGCTTGAATATCC
rJMSF008M19+ CCCAGCTTACTCGGAAGAAGATTTAAGATCATTACCTGCTCTCCACGGGCTTGAATATCC
____________________________________________________________
consensus CCCAGCTTACTCGGAAGAAGATTTAAGATCATTACCTGCTCTCCACGGGCTTGAATATCC
. : . : . : . : . : . :
rJMFF037H20+ ACTGAAGCCTGGCATTGATGGTCAGGAATTCTAGGGAGCATTATCGAGGAAAGCTTTCCC
rJMSF016F17+ ACTGAAGCCTGGCATTGATGGTCAGGAATTCTAGGGAGCATTATCGAGGAAAGCTTTCCC
rJMSF008M19+ ACTGAAGCCTGGCATTGATGGTCAGGAATTCTAGGGAGCATTATCGAGGAAAGCTTTCCC
____________________________________________________________
consensus ACTGAAGCCTGGCATTGATGGTCAGGAATTCTAGGGAGCATTATCGAGGAAAGCTTTCCC
. : . : . : . : . : . :
rJMFF037H20+ GTGGGACCAATTGTATTGTATACAAGATGTACGCATCCCTTCGAGTAACTAAGTGGCTGC
rJMSF016F17+ GTGGGACCAATTGTATTGTATACAAGATGTACGCATCCCTTCGAGTAACTAAGTGGCTGC
rJMSF008M19+ GTGGGACCAATTGTATTGTATACAAGATGTACGCATCCCTTCGAGTAACTAAGTGGCTGC
____________________________________________________________
consensus GTGGGACCAATTGTATTGTATACAAGATGTACGCATCCCTTCGAGTAACTAAGTGGCTGC
. : . : . : . : . : . :
rJMFF037H20+ AAGTAAAATCGGGAGTTGAACTGTGCATATGCTGGTGATAATGCAAGAATGGCTAGGTTC
rJMSF016F17+ AAGTAAAATCGGGAGTTGAACTGTGCATATGCTGGTGATAATGCAAGAATGGCTAGGTTC
rJMSF008M19+ AAGTAAAATCGGGAGTTGAACTGTGCATATGCTGGTGATAATGCAAGAATGGCTAGGTTC
____________________________________________________________
consensus AAGTAAAATCGGGAGTTGAACTGTGCATATGCTGGTGATAATGCAAGAATGGCTAGGTTC
. : . : . : . : . : . :
rJMFF037H20+ TGGGTTCTGAATTGTAGTTATGTGGTTCAAATCTCTTTGGTAATTCAGTTCTTGCAAGTT
rJMSF016F17+ TGGGTTCTGAATTGTAGTTATGTGGTTCAAATCTCTTTGGTAATTCAGTTCTTGCAAGTT
rJMSF008M19+ TGGGTTCTGAATTGTAGTTATGTGGTTCAAATCTCTTTGGTAATTCAGTTCTTGCAAGTT
____________________________________________________________
consensus TGGGTTCTGAATTGTAGTTATGTGGTTCAAATCTCTTTGGTAATTCAGTTCTTGCAAGTT
. : . : . : . : . : . :
rJMFF037H20+ AAGGGATGCCAGTGTTTCGTCTCTTAGCAATCAATATTGTATCTGTTTGCAACCCACCCA
rJMSF016F17+ AAGGGATGCCAGTGTTTCGTCTCTTAGCAATCAATATTGTATCTGTTTGCAACCCACCCA
rJMSF008M19+ AAGGGATGCCAGTGTTTCGTCTCTTAGCAATCAATATTGTATCTGTTTGCAACCCACCCA
____________________________________________________________
consensus AAGGGATGCCAGTGTTTCGTCTCTTAGCAATCAATATTGTATCTGTTTGCAACCCACCCA
. : . : . : . : . : . :
rJMFF037H20+ CCCACCCACGTGTAACTCTGTTCTAGTGCTGCTATTGTTTGTTAACTGTGCTCCTTTGTT
rJMSF016F17+ CCCACCCACGTGTAACTCTGTTCTAGTGCTGCTATTGTTTGTTAACTGTGCTCCTTTGTT
rJMSF008M19+ CCCACCCACGTGTAACTCTGTTCTAGTGCTGCTATTGTTTGTTAACTGTGCTCCTTTGTT
____________________________________________________________
consensus CCCACCCACGTGTAACTCTGTTCTAGTGCTGCTATTGTTTGTTAACTGTGCTCCTTTGTT
. : . : . : . : . : . :
rJMFF037H20+ CTGTATTTGTAAACAAATTAAAGACACATCACATTGTAATTACAAACACATAAACTGTTA
rJMSF016F17+ CTGTATTTGTAAACAAATTAAAGACACATCACATTGTAATTACAAACACATAAACTGTTA
rJMSF008M19+ CTGTATTTGTAAACAAATTAAAGACACATCACATTGTAATTACAAACACATAAACTGTTA
____________________________________________________________
consensus CTGTATTTGTAAACAAATTAAAGACACATCACATTGTAATTACAAACACATAAACTGTTA
. : . : . : . : . : . :
rJMFF037H20+ ACTGCAGGTGCAGAACATAAATTGTTAGCTGTAGGTATAACAATTTGTGTCTGTGATTAT
rJMSF016F17+ ACTGCAGGTGCAGAACATAAATTGTTAGCTGTAGGTATAACAATTTGTGTCTGTGATTAT
rJMSF008M19+ ACTGCAGGTGCAGAACATAAATTGTTAGCTGTAGGTATAACAATTTGTGTCTGTGATTAT
____________________________________________________________
consensus ACTGCAGGTGCAGAACATAAATTGTTAGCTGTAGGTATAACAATTTGTGTCTGTGATTAT
. : . : . : . : . : . :
rJMFF037H20+ CATGTTATGTGTTTGTGATTATTATATTATGTGTTTTCAATTTGTTTACATATATAAAAA
rJMSF016F17+ CATGTTATGTGTTTGTGATTATTATATTATGTGTTTTCAATTTGTTTACATATATAAAAA
rJMSF008M19+ CATGTTATGTGTTTGTGATTATTATATTATGTGTTTTCAATTTGTTTACATATATAAAAA
____________________________________________________________
consensus CATGTTATGTGTTTGTGATTATTATATTATGTGTTTTCAATTTGTTTACATATATAAAAA
. : . : . : . : . : . :
rJMFF037H20+ CTATTAATGGCAAGTACAAAATGTAATAATTATAGACATATAAT
rJMSF016F17+ CTATTAATGGCAAGTACAAAATGTAATAATTATAGACATATAATTTTTAGATC
rJMSF008M19+ CTATTAATGGCAAGTACAAAATGTAATAATTATAGACATATAATTTTTAGATCCAAGGTT
____________________________________________________________
consensus CTATTAATGGCAAGTACAAAATGTAATAATTATAGACATATAATTTTTAGATCCAAGGTT