Contig 007033:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS108G09Sequence627007033 (2)ref|XP_006448770.1|7e-117hypothetical protein CICLE_v10014090mg [Citrus clementina] gb|ESR62010.1| hypoth
JMSF007J20Sequence319001900 (2)ref|XP_006365432.1|124PREDICTED: peroxisome biogenesis protein 1-like [Solanum tuberosum]782007033 (2)gb|KJB69965.1|3e-85hypothetical protein B456_011G051500 [Gossypium raimondii]

Alignment

This contig is upended


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JMFS108G09-                                   TGAATTCCTTCCAGTTGCAATGCGTGATATTACTAA
                      ____________________________________________________________
consensus                                     TGAATTCCTTCCAGTTGCAATGCGTGATATTACTAA
 
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JMFS108G09-           ACCTTCTTCAGATGGTGGACGCACTGGTTGGGAGGATGTTGGGGGTCTTAATGACATCTG
                      ____________________________________________________________
consensus             ACCTTCTTCAGATGGTGGACGCACTGGTTGGGAGGATGTTGGGGGTCTTAATGACATCTG
 
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JMFS108G09-           CAATGCTATAAAAGAGATGATTGAGTTACCTTCGAAGTTTCCAAATATCTTTTCACAAGC
                      ____________________________________________________________
consensus             CAATGCTATAAAAGAGATGATTGAGTTACCTTCGAAGTTTCCAAATATCTTTTCACAAGC
 
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JMFS108G09-           TCCATTAAGGATGCGGTCCAATGTCCTATTGTATGGTCCCCCTGGTTGTGGCAAGACACA
                      ____________________________________________________________
consensus             TCCATTAAGGATGCGGTCCAATGTCCTATTGTATGGTCCCCCTGGTTGTGGCAAGACACA
 
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JMFS108G09-           CATTGTTGGTGCTGCTGCTGCTGCATGTTCCCTACGGTTTATCTCAGTCAAAGGCCCTGA
                      ____________________________________________________________
consensus             CATTGTTGGTGCTGCTGCTGCTGCATGTTCCCTACGGTTTATCTCAGTCAAAGGCCCTGA
 
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JMFS108G09-           ACTGCTGAATAAGTACATTGGTGCTTCTGAGCAAGCTGTTCGCGATATATTTTCTAAAGC
                      ____________________________________________________________
consensus             ACTGCTGAATAAGTACATTGGTGCTTCTGAGCAAGCTGTTCGCGATATATTTTCTAAAGC
 
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JMFS108G09-           AGCTTTAGCAGCACCATGCCTTCTGTTTTTTGATGAATTTGATTCTATTGCACCCAAGAG
rJMSF007J20+                                                                    AG
                      ____________________________________________________________
consensus             AGCTTTAGCAGCACCATGCCTTCTGTTTTTTGATGAATTTGATTCTATTGCACCCAAGAG
 
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JMFS108G09-           GGGGCATGATAACACTGGTGTGACAGATAGAGTAGTAAATCAATTTCTAACAGAATTGGA
rJMSF007J20+          GGGNCATGATAACACTGGTGTGACAGATAGAGTAGTAAATCAATTTCTAACAGAATTGGA
                      ____________________________________________________________
consensus             GGGGCATGATAACACTGGTGTGACAGATAGAGTAGTAAATCAATTTCTAACAGAATTGGA
 
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JMFS108G09-           TGGTGTTGAAGTCTTGACTGGTGTTTTTGTTTTTGCTGCAACAAGTAGACCTGATTTGCT
rJMSF007J20+          TGGTGTTGAAGTCTTGACTGGTGTTTTTGTTTTTGCTGCAACAAGTAGACCTGATTTGCT
                      ____________________________________________________________
consensus             TGGTGTTGAAGTCTTGACTGGTGTTTTTGTTTTTGCTGCAACAAGTAGACCTGATTTGCT
 
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JMFS108G09-           TGATGCTGCTCTCCTACGGCCTGNGAGATTGGATCGTCTGTTGTTTTGTGATTTTCCTTC
rJMSF007J20+          TGATGCTGCTCTCCTACGGCCTGGGAGATTGGATCGTCTGTTGTTTTGTGATTTTCCTTC
                      ____________________________________________________________
consensus             TGATGCTGCTCTCCTACGGCCTGGGAGATTGGATCGTCTGTTGTTTTGTGATTTTCCTTC
 
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JMFS108G09-           ACCACGTGAGAGGTTGGACATTCTTAGAGTTCTTTCAAGAAAGTTACCACT         
rJMSF007J20+          ACCACGTGAGAGGTTGGACATTCTTAGAGTTCTTTCAAGAAAGTTACCACTTGAAAGTAA
                      ____________________________________________________________
consensus             ACCACGTGAGAGGTTGGACATTCTTAGAGTTCTTTCAAGAAAGTTACCACTTGAAAGTAA
 
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rJMSF007J20+          CGTGAACTTGGAAGCGATAGCACATATAACCGAAGGGTTGAGTGGAGCTGATCTGCAAGC
                      ____________________________________________________________
consensus             CGTGAACTTGGAAGCGATAGCACATATAACCGAAGGGTTGAGTGGAGCTGATCTGCAAGC
 
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rJMSF007J20+          GCTTCTTTCTGATGCACAGCTTGAAGCCGTACATGACATCCTGAACGGTGAAAATGGTGA
                      ____________________________________________________________
consensus             GCTTCTTTCTGATGCACAGCTTGAAGCCGTACATGACATCCTGAACGGTGAAAATGGTGA
 
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rJMSF007J20+          GCAGTCTGGCAAGATGCCTGTGATTACCGACACTCTTTTGAAACGCATTGCGTCCGTGGC
                      ____________________________________________________________
consensus             GCAGTCTGGCAAGATGCCTGTGATTACCGACACTCTTTTGAAACGCATTGCGTCCGTGGC
 
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rJMSF007J20+          AAAGCCCTCGGTTTCAGAAAACGAAAAGCGGCGCTTATACGACATCTACAGCCAGTTTTT
                      ____________________________________________________________
consensus             AAAGCCCTCGGTTTCAGAAAACGAAAAGCGGCGCTTATACGACATCTACAGCCAGTTTTT
 
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rJMSF007J20+          GGATTCAAAAAGATCAGTTGCTTCCCAGTCTAGAGACGCAAAAGGCAAGAGAGCCACCCT
                      ____________________________________________________________
consensus             GGATTCAAAAAGATCAGTTGCTTCCCAGTCTAGAGACGCAAAAGGCAAGAGAGCCACCCT
 
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rJMSF007J20+          CGCTTGAGCTTGAGGATCAGTTACAGCAAATGAATTTGAAAACCCAAATTCTCAGTTCAA
                      ____________________________________________________________
consensus             CGCTTGAGCTTGAGGATCAGTTACAGCAAATGAATTTGAAAACCCAAATTCTCAGTTCAA
 
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rJMSF007J20+          CATCTTCTTCTTGTCACGGTATGGATGTATCAAACTCTTTTTTTCTCCGCTACCAACAAT
                      ____________________________________________________________
consensus             CATCTTCTTCTTGTCACGGTATGGATGTATCAAACTCTTTTTTTCTCCGCTACCAACAAT
 
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rJMSF007J20+          TTTTCTGCTTAATTAACATAGTTACTCGATATCTATCTTAGGTTAAAATGTTTGGTAGAT
                      ____________________________________________________________
consensus             TTTTCTGCTTAATTAACATAGTTACTCGATATCTATCTTAGGTTAAAATGTTTGGTAGAT
 
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rJMSF007J20+          TTTTCCTTATAATTTTGGTTACTTTAATGTCAATATTTACTAATTCTATTCAAATACTTG
                      ____________________________________________________________
consensus             TTTTCCTTATAATTTTGGTTACTTTAATGTCAATATTTACTAATTCTATTCAAATACTTG