Contig 007031:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+                                        AACAGACAAGGTCAAATAAAGGGTCTCAAA
                      ____________________________________________________________
consensus                                           AACAGACAAGGTCAAATAAAGGGTCTCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+          AGATGCCTGGGTGCAGTTTAGTCATGCTTGAAGGTCCTTACTAGAGTATATTTCTCCCCA
                      ____________________________________________________________
consensus             AGATGCCTGGGTGCAGTTTAGTCATGCTTGAAGGTCCTTACTAGAGTATATTTCTCCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+          ATTGCATTACTGCATTTTTTCTGGATGTCCAATGAAGTCTATGGTGGCTTGTGAACAATA
                      ____________________________________________________________
consensus             ATTGCATTACTGCATTTTTTCTGGATGTCCAATGAAGTCTATGGTGGCTTGTGAACAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+          TGGATCACAGTACAAACAAAATTGAGTCTATCACTGAAGTAATTCCCGGATCCTTTGTCT
                      ____________________________________________________________
consensus             TGGATCACAGTACAAACAAAATTGAGTCTATCACTGAAGTAATTCCCGGATCCTTTGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF004D05+                                   TTTTTAACAANCATCCTCCCCCNCTATATGTAACG
rJMSF007C14+          CTATTTGAGGTAACTAATCACTCCCTTTTTAACAAACATCCTCCCCCACTATATGTAACG
                      ____________________________________________________________
consensus             CTATTTGAGGTAACTAATCACTCCCTTTTTAACAAACATCCTCCCCCACTATATGTAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF004D05+          GATGGCAATATGGCGCAGACAAAAGCTTTGTCCGGCATTCATCCGTTAAAGCACCCACAG
rJMSF007C14+          GATGGCAATATGGCGCAGACAAAAGCTTTGTCCGGCATTCATCCGTTAAAGCACCCACAG
                      ____________________________________________________________
consensus             GATGGCAATATGGCGCAGACAAAAGCTTTGTCCGGCATTCATCCGTTAAAGCACCCACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF004D05+          AGATNCCATACACAGTTTCCATATGACATCATTNTCCCTGCACTNGCANTCCCCCTATAT
rJMSF007C14+          AGATACCATACACAGTTTCCATATGACATCATTCTCCCTGCACTTGCACT-CCCCTATAT
                      ____________________________________________________________
consensus             AGATACCATACACAGTTTCCATATGACATCATTCTCCCTGCACTTGCACTCCCCCTATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF004D05+          ATNTTGCCTTAGCTCATGAAGATAGATAGAAAGAGTGNGAGTATGGGTANGATGAGAAAA
rJMSF007C14+          ATCTTGCCTTAGCTCATGAAGATAGATAGAAAGAGAGAGAGTATGGGTATGATGAGAAAA
                      ____________________________________________________________
consensus             ATCTTGCCTTAGCTCATGAAGATAGATAGAAAGAGTGAGAGTATGGGTATGATGAGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF004D05+          TGGTTCAGAAGGTNGAAGANGATGTTGAAAGCAAAGGGCANGAGGTCAGCAGAAGCAGAA
rJMSF007C14+          TGGTTCAGAAGGTTGAAGAAGATGTTGAAAGCAAAGGGCAAGAGGTCAGCAGAAGCAGAA
                      ____________________________________________________________
consensus             TGGTTCAGAAGGTTGAAGAAGATGTTGAAAGCAAAGGGCAAGAGGTCAGCAGAAGCAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF004D05+          GAA                                                         
rJMSF007C14+          GAAACTGCTTCTTCAGCTTCACCTCCTGCTGCAGCAGCTCAGGATAATCAGCTATTTCTC
                      ____________________________________________________________
consensus             GAAACTGCTTCTTCAGCTTCACCTCCTGCTGCAGCAGCTCAGGATAATCAGCTATTTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+          TCACCCAAAGCCAGCAGAAGCACTCAAGCTACAACTGAACTTTGTGATGATCATCCAGCT
                      ____________________________________________________________
consensus             TCACCCAAAGCCAGCAGAAGCACTCAAGCTACAACTGAACTTTGTGATGATCATCCAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+          ACAACCTTGTCAAATTGATGCCCAACATTTCTCTTAAAAAATAATAATATCTGTATTTTG
                      ____________________________________________________________
consensus             ACAACCTTGTCAAATTGATGCCCAACATTTCTCTTAAAAAATAATAATATCTGTATTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+          AGTAGTTTCTTCTTGTTCTTTCTATTATGATCTAGTGTATGTTTTCCCTTTCAGTTATCT
                      ____________________________________________________________
consensus             AGTAGTTTCTTCTTGTTCTTTCTATTATGATCTAGTGTATGTTTTCCCTTTCAGTTATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007C14+          TCTCCGGTGGTCTAAATCATGATGCCAGTGTTTCCATGTCATTCTACACTGAATTGGACA
                      ____________________________________________________________
consensus             TCTCCGGTGGTCTAAATCATGATGCCAGTGTTTCCATGTCATTCTACACTGAATTGGACA