Contig 007030:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009J22Sequence625007030 (2)emb|CAN81424.1|1e-51hypothetical protein VITISV_035944 [Vitis vinifera]
JMSF007B03Sequence271010576 (2)773007030 (2)ref|XP_009625720.1|2e-58PREDICTED: two-component response regulator-like APRR2 [Nicotiana tomentosiform

Alignment

This contig is upended


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JMFN009J22+                                                           ATACAAAGAAAT
                      ____________________________________________________________
consensus                                                             ATACAAAGAAAT
 
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JMFN009J22+           CTAATCCTGCAAAATTTCACAGCACTCATGATCCGTTTATATATGTATGATGTTGAATAT
                      ____________________________________________________________
consensus             CTAATCCTGCAAAATTTCACAGCACTCATGATCCGTTTATATATGTATGATGTTGAATAT
 
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JMFN009J22+           ATAGCGAGCAATCAATCCCCCATGGATACTTTATCTGCAAAACTCATGGTGGACATCTAT
                      ____________________________________________________________
consensus             ATAGCGAGCAATCAATCCCCCATGGATACTTTATCTGCAAAACTCATGGTGGACATCTAT
 
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JMFN009J22+           ACATAATTTTTAAGGTTTCTTCTGCTGTAAGTCCATTACTCGGATCTGTCATCGCCATCT
                      ____________________________________________________________
consensus             ACATAATTTTTAAGGTTTCTTCTGCTGTAAGTCCATTACTCGGATCTGTCATCGCCATCT
 
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JMFN009J22+           TCTTCCATGCTATCGCTTCCAGTCATGGATGTTCCTCGAGAGATTGCCGCTAACTGAAGG
                      ____________________________________________________________
consensus             TCTTCCATGCTATCGCTTCCAGTCATGGATGTTCCTCGAGAGATTGCCGCTAACTGAAGG
 
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JMFN009J22+           GTACCCTGAGGAGAACCAGACTGGGAACTACTCTGCTTTGAGGATTCACCATACTGGTCA
                      ____________________________________________________________
consensus             GTACCCTGAGGAGAACCAGACTGGGAACTACTCTGCTTTGAGGATTCACCATACTGGTCA
 
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JMFN009J22+           ACCGTAAACAAATTACCTAATACAACAATGGATTTATTTGCAGGGGAGGATTGTGTGGTT
                      ____________________________________________________________
consensus             ACCGTAAACAAATTACCTAATACAACAATGGATTTATTTGCAGGGGAGGATTGTGTGGTT
 
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JMFN009J22+           GGGATTCGTCGTGTATGGAGCCGATATTTTTGCAAATGACTCTTCACTTCATCATTGGTC
rJMSF007B03-                         TGGAGCCTATATTTTTGCAAATGACTCTTCACTTCATCGTTGGTC
                      ____________________________________________________________
consensus             GGGATTCGTCGTGTATGGAGCCTATATTTTTGCAAATGACTCTTCACTTCATCGTTGGTC
 
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JMFN009J22+           AGACCTTCTACTTGCATAAGCTCTCTAATCTGCTTAGGAGTAGCAACTTGTGGACCACCA
rJMSF007B03-          AGACCATCAACTTGCATAAGCTCTCTAATCTGCTTCGGAGTTGCAACTTGTGCACCCCCA
                      ____________________________________________________________
consensus             AGACCTTCTACTTGCATAAGCTCTCTAATCTGCTTCGGAGTTGCAACTTGTGGACCCCCA
 
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JMFN009J22+           AGCTGTTGCAGGGCATTGATAAATCGTTTATGCAACTCCGGAGACCAGCACCTTCTTTGC
rJMSF007B03-          AGTTGTTGCAGGGCATTGACGAATCGCTTATGCAACTCCGGTGACCAGCATCTTCTTTGC
                      ____________________________________________________________
consensus             AGTTGTTGCAGGGCATTGATGAATCGTTTATGCAACTCCGGTGACCAGCATCTTCTTTGC
 
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JMFN009J22+           TTCC                                                        
rJMSF007B03-          TTCCGACTAGTTTGCTGCTGTTGAGGCTGTGCTCCAGTCTGTATACTGTGTACACTACTT
                      ____________________________________________________________
consensus             TTCCGACTAGTTTGCTGCTGTTGAGGCTGTGCTCCAGTCTGTATACTGTGTACACTACTT
 
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rJMSF007B03-          GATGAAGCGGAAGATACACAAGCTTTTGTATTCAAGCAACCGATTACCATATCTTCCCTG
                      ____________________________________________________________
consensus             GATGAAGCGGAAGATACACAAGCTTTTGTATTCAAGCAACCGATTACCATATCTTCCCTG
 
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rJMSF007B03-          GGGTTCTTAAATCCAGGAGTACCAAGCGAGAGCCCGGGTATTCCTGGTAATTCCTTATCT
                      ____________________________________________________________
consensus             GGGTTCTTAAATCCAGGAGTACCAAGCGAGAGCCCGGGTATTCCTGGTAATTCCTTATCT
 
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rJMSF007B03-          TCCTTCATCACAACTGCTGATGGAAAACCGGAATACCTCTTGAAAGGCATAAACGCCTTC
                      ____________________________________________________________
consensus             TCCTTCATCACAACTGCTGATGGAAAACCGGAATACCTCTTGAAAGGCATAAACGCCTTC
 
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rJMSF007B03-          CCTATATTCCTCGTTTTACAAGAGACGAGTAGGTCGTTGGTTATCGAGCTATTCTCAGCT
                      ____________________________________________________________
consensus             CCTATATTCCTCGTTTTACAAGAGACGAGTAGGTCGTTGGTTATCGAGCTATTCTCAGCT
 
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rJMSF007B03-          TCCTCAGTTGTCATTCTGAGGTTAGCTTCTGTGCGGGGTTTCTTATTGGTGAACTCTGAA
                      ____________________________________________________________
consensus             TCCTCAGTTGTCATTCTGAGGTTAGCTTCTGTGCGGGGTTTCTTATTGGTGAACTCTGAA